cfap410 (cunh21orf2,LOC102788189)


Basic Information

Item Value
gene id cfap410
gene name cunh21orf2,LOC102788189
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13112363 ~ 13115289 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815660.1
CCATATATTGTAGTTATCCCCGTATCCCCAGTCAGGTTCATTTCGCCAACCAAATGTATTGGGGAACACTATTCACATCACTCTTAGTTAGTTGATATGCTATGAAGCTAACACGGAAACAGGTTCTCGCGAAGGCAAAGGCTTCAGATTTGGAAAGCGTGAAGAAATTGAACTGCTGGGGATGCAACCTGACTGATATTTCTATCTTCACTCAAATGGCCAACATTGAGGTGCTGACACTTAGtGTCAACAACatctcatctctctcttctctggctggctgtctgtctctatgtgaACTATACCTGAGGAAGAACAATATTCCCTCACTCTCTGAGCTCTCTCATCTGCGACCCTTGACACGTCTCAGAGTGCTCTGGTTGGCTGAGAATCCCTGTTGTGGAACTGACTCCAGCCAATATCGCCTCACCGTACTGCGCTGCCTTCCTCGCCTCCTGAAGCTTGACAACCAAGTAGTGACAGAGGATGAGCTTGCACTTGCTCTCATGGAGGGTGAAGAAGTCACCACCCCCCCAGGTAGTGTTCAAAACCAGCTTTCCACCAATGGACTTCCAGATGCAGAGACAGAGAATGACTCGCTTAACTACAACATGGAGGAGACCAACAAAATCAGGGAAGAGTTGGGGATGAAGCCCCTCTCCAGAGACAAGTTCCCCTCTGCTTCTTCTCCATCAACGAGAGAAAATAAACCATCAATGAAAAAGacacacactcttgatgcagttctgctgctgctgaaggatTTGGATGAAGAAGAGCTTCACATTGTACACACAGCTACCCAAAATAGACTGCAAACTTACACACTTGACTCAGAGATGCTATTCGATTCACTGAAGACACAAAAAACTCCCGAGATCCAACACTGAAACATTATACAGTATGCACTCAGGGCCAAACCTCTCCCGCCTCTTTCCATATTTAACCCAAACCTCATTCTTGGGGATCACAATACAGATCCTTTAACACCGCCTTTCTTACCTGTTACCTTCTGATTGCAATATGCATGGCACTTGATTTGGTTCACCGATCTCTCTCCCGTTtgttacacactttcacataTGGAGAAGTACTAAAGAACTTTacttgcccttttttttttttttttt

Function

NR:

description
protein C21orf2

GO: NA

KEGG:

id description
K23456 CFAP410, C21ORF2; cilla- and flagella-associated protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815660.1 True 1130 mRNA 0.45 8 13112363 13115289

Neighbor

gene id symbol gene type direction distance location
xirp1 LOC104959684 coding downstream 167645 12931398 ~ 12944718 (-)
LOC120568154 NA coding downstream 226916 12872858 ~ 12885447 (-)
hhatla hhatl,LOC108238572,LOC103360290,LOC106926958 coding downstream 258044 12846128 ~ 12854319 (-)
LOC120567650 LOC100690777,LOC102314387,LOC101469034,LOC102212652 coding downstream 267927 12839583 ~ 12844436 (-)
LOC120568729 LOC104956573,LOC103360293 coding downstream 308423 12801906 ~ 12803940 (-)
LOC120568264 LOC104953400 coding upstream 17643 13132932 ~ 13151478 (-)
LOC120568263 LOC104953400 coding upstream 36806 13152095 ~ 13158290 (-)
tmbim1a tmbim1 coding upstream 70965 13186254 ~ 13195957 (-)
casp8 NA coding upstream 81450 13196739 ~ 13207620 (-)
LOC120568680 catip coding upstream 92741 13208030 ~ 13214290 (-)
G114159 NA non-coding downstream 7966 13103242 ~ 13104397 (-)
G114130 col6a2,LOC105007837 non-coding downstream 17534 13091647 ~ 13094829 (-)
G114153 LOC105007837 non-coding downstream 21047 13088686 ~ 13091316 (-)
G114131 NA non-coding downstream 27979 13081614 ~ 13084384 (-)
LOC120567923 NA non-coding downstream 72405 13023270 ~ 13039958 (-)
G114177 NA non-coding upstream 61514 13176803 ~ 13177751 (-)
G114183 NA non-coding upstream 82456 13197745 ~ 13223865 (-)
G114196 lect1 non-coding upstream 165642 13280931 ~ 13286164 (-)
G114199 NA non-coding upstream 171362 13286651 ~ 13287220 (-)
G114202 NA non-coding upstream 172893 13288182 ~ 13288993 (-)
G114152 NA other downstream 23800 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 137035 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 343738 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 503794 12601180 ~ 12608569 (-)
G113805 NA other downstream 894096 12218062 ~ 12218267 (-)
dis3l2 dis3l2 other upstream 354242 13469531 ~ 13482225 (-)
tfr1a NA other upstream 834582 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1498324 14613613 ~ 14618224 (-)
G114680 NA other upstream 1680629 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 2174793 15290082 ~ 15304610 (-)

Expression


Co-expression Network