si:ch73-170d6.2


Basic Information

Item Value
gene id si:ch73-170d6.2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4110746 ~ 4121351 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815667.1
CATGCAATATTTGTATTGATATCGGTCTGTACCGATGGCAATGTCTGGTAATATGGGTACAGGCTTATTTTACTCCCAATACACTTTGCAGACGTATATCAATAGTCAAATGCtttataaaaaagcaaaaagtaaAAGGTGGACTTCTAAACTTGTTATAAATCTGTTACATTCTATAACAACCTGAACAAAGCCTCTCTCATCTGTTTTAATAGGTATCATAAGTTGTTTTCCTTCCTGCAGATGTATTTGCATAAACCTACCCTTGATTTTACCTATGGAACCTCTTTTGTATCtacttcagaatcagaatactttattgatctctCAGGGAAATTGTTATGACACAGTATCTATTACTGCATTGCTTTTACATCATATAAAACATATCCACAGTCACTGGTTAAGCAACTAGAAACTGCAGGATTCTTACTCCACAGCAGAACTGGGGCATGCAAGAGCACATTAACAAAAGAGAATTGATGTACTTACAGTGAAGATGTGTGTAATCCTCTGAGGCACAGCTGTGGTTTCAGACATATTTTCTCTGAGAGAGAAATGCCCCTAGATCTTTAGTCATCAAAAGGAGGCGGCACAGAGAAGAATCAGGCTGATTTCCAAGAAATGGCATGACCTGCAGAGTGTCGAGGGAGGagaaaaactttgttctttttgtattttatgagTATGGGCTGTGATAAGGACCATCAGAAACATTGTGGTTGGGTTGACCAAAGTTCTTCTGCGACCCCACAGAAACCCTGGCTATGGTTTGAGGAGgcgtgagagtcccgtacaggaaacaggaaatatCACTGCCTTTATCGCTACCACAGATTTGGACCTGAGTGCACATCCAGAGCAGAAGGCATAGGCCTACACTTTTACTGCACAGACTTGGAGTCTTAAATGTTTTCTGATTAGAACTTAGTACCTCCTCAGAGGGTTGGTCTTGGTCATCTTGATTGTAAATGTAAGACTTCAATATGAAACGGCTTGCTGATGCTTATAAAGAAGAGAGCACATTGTTAGAACATCAGAAAGGGTCTCTCTCAGTTTATAAAGTTCCCCTGACAGAAGAACAAATCAATGTGAATGGGTGCAAGCAATTCCGTTTGGGTAAAGAGTCCATTAAACCTAATCGCACCATAATGGTTCTCGGAGCAACTGGTGCTGGGAAGTCAACTCTCATCAATGGGATGATCAATTACATTCTAGGTGTCAAATGGGAGGATTCATATCGGTTTAAGTTAGTTGATGAGGGTCAGTCGAAATCACAAGCTGAAAGTCAGACTTCTGAAGTCACTGTGTACAAAATCTACCACCAGGAAGGCTTTGAAATAGATTGCTCACTGACCATTGTTGACACTCCAGGCTTTGGAGATACAAGAGGCATAGAAAGAGACCAGATGATCACAGAACAGCTACGTAATCTCTTCTCTGCTGATTGTGGTGTCAGTGAAATTGACGCTGTGTGTTTTGTAGCTCAGGCTGCTTTAGCACGACTCACACCAACACAGAAATATGTGTTTGATTCTGTGCTCTCAATCTTTGGCAAAGATGTGGCAGAAAACATCCGGGTTCTGGTGACATTCGCAGACAGCCAGCAACCACTAGTTCTAGAGGCAATCAATGCTTCAGGTGTCCCATGTCCTAAAAAAGGTGGGCTGCCAGTTCACTTCAAATTCAATAATTCAGCGTTGTTTGCAGACAACAAATCATCTGCAGCAGACAGTATGAGTGgggatgatgaagatgaagatggaGACTTTGATAAGATGTTTTGGAACATGGGAACAAAAAGCATGAAGAGGTTCTTTGATGCTTTAAATATCATAGAAACCAAAAGCTTAAAAATGACGAAAGAGGTCCTCAGAGAAAGAAAGCAGCTCGAGAATTCAGTTGAAAATGTGCAGAAGCAGGTTAAAGTTGGGTTAGCCAAGCTTGAGGAGATAAAAGAGACAACTGGAAAACTAAAAGAGCATGAGGGAGAAATCAGCAGAAATGAGAACTTTGAGTTTTATGTCAACATCAGAAAGCCTGTTCAAATAGATATTTCTGGAACTGGAAATTACATCACCAACTGTCAGCAGTGCCATGTCACCTGTCACTATCCCTGTTCAATACCAAATGATGCAGATAAAGCACGCTGTTGTGCAATGGGAAGAAATGGATACTGTACTCAGTGTCCAAATAAATGTCATTGGAGTGTACATTCTAATCAGAAGTGCAGATGGGAGTATATTGAAGTTAAAGAAAAAGGAACAGTGCAAGAGCTGAAAGAAAAGTACCAGAAGGCCACAAAGGCTAAAATAACTGTTGAGGAATTGGTTGATGGGCTGAAGGCTGACTATGATCGTGTGCAGGCTGAGGTGGTGAAACTGGTGGTGAGGTTATCTCAGTGTTTAAACCGACTTAAAGAGATAGCACTGAAGCCAGATCCTCTACAGATCCACTACAGATCCACTACAGACTACATTGACATGCTTTTTGAGGGAGAGAAAGCtgaggccaagccaggctggaAGCAACGAGTTAAGTCCTTGATAAACATGAGAGATAAAGCAGAGTTAATGGCTAAAGCAGCCAGAGGAGAGAAACTCCTCCATCGTCGAGATTCTCAAATCTAGGATGATAAGTTTATGCTGCGTCGACACGACACTCAAAACTGTGCTGCGCTATCTATACACTTTCCAATTGCTATCACATTGCTTCAGCTCTAATCAGACAGCTACTGAAGGAAAGGCATGTGTTATTTCATTGTTGATTTGTATGTATTGTAAAATGTGATCTTGTTCAGCCAGAAATTAAGGCAAATACTCCTCCAAAGTACACTGACATACTTATTGAAAGAGAGAAATCTGAGGCCAAGCCTCAGTGGAAGCAATGAGTTTGTTCTCTGATAGTCAAGACAAAAAGCAGAGTATGTGTCTTGTTACTAAGTCTGAGATTAAAATGACTAAGGAAATCTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC108265687 isoform X1

GO: NA

KEGG:

id description
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815667.1 True 2972 mRNA 0.41 3 4110746 4121351

Neighbor

gene id symbol gene type direction distance location
cldn15la LOC104937175,LOC107383743,LOC108229378 coding downstream 83160 4021167 ~ 4027586 (-)
saga LOC100700585,LOC102198835,LOC102289605,LOC101471160,LOC103367699,LOC102794384 coding downstream 92484 4001441 ~ 4018262 (-)
proca NA coding downstream 126751 3972332 ~ 3983995 (-)
LOC120568530 NA coding downstream 220830 3883756 ~ 3889916 (-)
LOC120568324 NA coding downstream 238931 3861329 ~ 3871815 (-)
slc39a6 slc39a6 coding upstream 24512 4145863 ~ 4168656 (-)
LOC120567835 LOC106949703,LOC103156008,LOC107087008 coding upstream 365977 4487328 ~ 4499789 (-)
LOC120567837 NA coding upstream 384371 4505722 ~ 4510614 (-)
si:dkey-7l6.3 NA coding upstream 398010 4519361 ~ 4527181 (-)
efr3a efr3a coding upstream 773910 4895261 ~ 5063854 (-)
G112009 NA non-coding downstream 9878 4100174 ~ 4100868 (-)
LOC120567799 NA non-coding downstream 28664 4074729 ~ 4082082 (-)
G112007 NA non-coding downstream 70549 4039884 ~ 4040197 (-)
G111997 NA non-coding downstream 141528 3967994 ~ 3969218 (-)
LOC120568335 NA non-coding downstream 289556 3800195 ~ 3821190 (-)
G112048 NA non-coding upstream 166428 4287779 ~ 4288307 (-)
G112050 NA non-coding upstream 184852 4306203 ~ 4306723 (-)
G112061 NA non-coding upstream 271499 4392850 ~ 4409467 (-)
G112068 NA non-coding upstream 307167 4428518 ~ 4495792 (-)
G112069 NA non-coding upstream 307676 4429027 ~ 4480919 (-)
G111942 NA other downstream 73783 3504498 ~ 4036963 (-)
LOC120568325 NA other downstream 477347 3629565 ~ 3633399 (-)
LOC120568522 NA other downstream 525220 3564546 ~ 3585526 (-)
LOC120569104 NA other downstream 654212 3445400 ~ 3456534 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other downstream 738971 3314646 ~ 3371775 (-)
G112043 NA other upstream 116751 4238102 ~ 4238670 (-)
G112046 NA other upstream 146187 4267538 ~ 4284083 (-)
G112233 NA other upstream 1542653 5664004 ~ 5668687 (-)
LOC120568546 NA other upstream 1602382 5723733 ~ 5746081 (-)
G112328 NA other upstream 1671812 5793163 ~ 5852447 (-)

Expression


Co-expression Network