cavin4a (murc,LOC104936762,LOC101469804,LOC100705704,LOC101164252)


Basic Information

Item Value
gene id cavin4a
gene name murc,LOC104936762,LOC101469804,LOC100705704,LOC101164252
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4337085 ~ 4349158 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815669.1
AATTCAGATTCCCTTTGGATCCTGaagcctttttaaaaaggggtagGTGGAGTTTCGCCTCTCTCCTGTCCCCAGACCTGAGTTTGGTCACATCGGTTGGGTGTTGCCACTTTCCGGTCTCCTTGCTGGCGAGTCCACTGGTCCTGGTCCCCTTTCCCCAAACTGAAACACACTTAGTAACTTTTTAATTAAGTTTCAAGCAAATTCAAAGGGAAACATCTCCTAGTCATCGAAACCCTGCAATGGATCAGCACAAGTATCGTACGGCGGGCgtacaggagaagctggagatcATCGGCGTAGAGGACGCTGATGGGAACCCCATCAGCGCCCTGACCATCCTGTCTCTGCTGGAGCGCGTGGCCGGCATCATCGACAATGTGCAGTCCTGCCAGCAGCGCATGGAGGAGCGTCAGCTGGACCTGGAGACCAACATCAAGACCATCCAGGGCGACGTCATGAAGCTGGCCAAGGACCACACGGACACCAGCGGCACGGTGGAGAAGCTCCTGCAGAAGACTCGCAAGGTCAGCGCCAACGTCAAGGAGGTCCGGGCGCGCGTCGAGAAACAAAACGTTCGCGTCAAGAAGGTGGAAACCACGCAGGACGAGCTGCTCACCCGCAACAAGTTCCGCGTCGTCATCTACCAGGGTGAGACCGAGATCCCATCTGTGGCCGTCACTAAGTCTTCCAAAGGATCCGGCCTGGACGGGCTGGAGATTGAGCCCGACTCCTACGATGTCCCTGCAGACCTCTCCTCCGACGAGGAGTACCTGAGCGTGGAGGAGGCCGACCCCTCGCGGGCCGCCCGCATCAAGAAATCAGTCGTGAAGAGCACAGAGAGCCTGAAGGCCGCCTTCTCCAAGGAGAAGATGAGCAAAACTAAAGGCAACCTGGGCACCAAGTTCCACAACCTGGGAGAGAAGGTCATGCCCAACGAGCGGAGGGAAAAGATGCACCAAGCTGGCGAGCGACTGAAGCAGTCCGGTGAGCGGCTGAAGGAGAACATCGCCAAGAAAGCTCCAACCAGAGAGACCTTCCGCATCAAGCTGAAGAAGGAGAGAGCCGTCGCCGAGGGCCAGGAGGGCGCCGAGGCCGGAGCGGAGGCCGAGGCCGAGCTCCACATCGACGCTCCGGCCGAGGAGAAGCCGCTCGCCTACACCGAGGTCGCGATGGAAACCAAGAGAGAAGGGCCAGTGGAGGAAGCCGGCGCCACCCGGATAGAAGACGAGGATTACAGGAAGTAGATCAGACGTCAGATCAGACATGAAGAGGAGGCGGGACGCCGCGGAAAGCTCGTAATGCCGAGGATTTAGAGAGAGggtctgtgattggtcaacattgatggacattttttatttttattcgcTAGGATTTATTCAAACGGAAGAATCAGTACTGACACCAAAAACTCATCCGAACTGGTTATTTATCAAATCTATTTCAGGGTGTTGATTAAAGTCACTCTGTCAGATTTTGTCTGTTGACATTTTCAACAATTATATAATTTAAACAACTTGACATGAATGTGCGAATCTTTATTTCAAATGCACTAAGAAACAAACGCAGTTTTAGAATTTGTTGACTAATTTGTGAGTCCCAAAAATGTCAGAGATGTGAGATTGTTACCGGGGTTGTGTTGGGATTGGTCACCATGGTGGCACCAGATGGCTTGAAGGAAAAGAAACGGTTGATAAAGGATGATGAATGTTGA

Function

symbol description
murc UDP-N-acetylmuramate--alanine ligase

NR:

description
muscle-related coiled-coil protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815669.1 True 1714 mRNA 0.53 2 4337085 4349158

Neighbor

gene id symbol gene type direction distance location
crfb16 NA coding upstream 272064 4051320 ~ 4065021 (+)
LOC120568532 NA coding upstream 339226 3995617 ~ 3997859 (+)
LOC120568531 NA coding upstream 344496 3986445 ~ 3992589 (+)
dusp28 dusp28,LOC102795231 coding upstream 373032 3959592 ~ 3964053 (+)
vcpip1 vcpip1,LOC102795816 coding upstream 387519 3936631 ~ 3949566 (+)
ift57 ift57,LOC102793808 coding downstream 28007 4377165 ~ 4393309 (+)
LOC120568271 NA coding downstream 67463 4416621 ~ 4418585 (+)
tmem71 NA coding downstream 109726 4458884 ~ 4474374 (+)
kcnq3 kcnq3 coding downstream 266875 4616033 ~ 4785371 (+)
LOC120567839 hhla1 coding downstream 456406 4805564 ~ 4835053 (+)
G111870 NA non-coding upstream 32298 4175530 ~ 4304787 (+)
G111856 NA non-coding upstream 189123 4098350 ~ 4147962 (+)
G111853 NA non-coding upstream 195407 4093351 ~ 4141678 (+)
G111852 NA non-coding upstream 196181 4092839 ~ 4140904 (+)
G111847 NA non-coding upstream 197590 4091414 ~ 4139495 (+)
G111891 NA non-coding downstream 83350 4432508 ~ 4433103 (+)
G111893 NA non-coding downstream 103655 4452813 ~ 4495891 (+)
G111897 LOC102195644,LOC102307680,LOC106675584 non-coding downstream 135476 4484634 ~ 4488017 (+)
G111904 NA non-coding downstream 166542 4515700 ~ 4516747 (+)
G111906 NA non-coding downstream 169091 4518249 ~ 4520189 (+)
tmeff1a tmeff1,LOC102775778 other upstream 10899 4212124 ~ 4326186 (+)
G111850 LOC102799398 other upstream 198152 4090508 ~ 4138933 (+)
G111848 NA other upstream 199542 4088644 ~ 4137543 (+)
LOC120568521 NA other upstream 485051 3540987 ~ 3852034 (+)
LOC120568327 LOC102295145 other upstream 811970 3500679 ~ 3525115 (+)
dnaaf11 NA other downstream 149836 4498994 ~ 4592347 (+)
G111910 NA other downstream 196267 4545425 ~ 4546082 (+)
LOC120568547 LOC106674584,LOC106676354,LOC106675207,LOC106675343,LOC106676464,LOC106676424,LOC106675739 other downstream 1439065 5788223 ~ 5789417 (+)
epdr1 epdr1,LOC104965688 other downstream 1634699 5983857 ~ 5993711 (+)
LOC120568055 NA other downstream 1654527 6003685 ~ 6016600 (+)

Expression


Co-expression Network