cntnap2b (LOC101476225,LOC102211470)


Basic Information

Item Value
gene id cntnap2b
gene name LOC101476225,LOC102211470
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 8103401 ~ 8136557 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815670.1
TATTGCACTTTTCTGTTGTGTTCCTTCCTGGGGGCTCCCCTCTGTCCCCTCCTCATTTCAGGGAGCCCTGTATTGTTGTACATAACAGACCGTACCAAGTGCGGCAGAGAGTGGGGGAGTATTGATTGGTCCGTGTGCTCAGCCGTTGGACAGCtccttgtgtgtctgtctgtctgaaatcATGCACCTGGAGCGCGCGAGGCCAGGCCCGCAGCACGACCGCGTTCTTCTGTTCATAAACTAGCTAGTTCCCGGAGATTCTCGGTCAAAACCCCGCTGGAGTGTCCGCTGGGCAGGTGGacgagagcagagagagaagacaaTACGAAGCGGGCGGACAGCCATTGCTTTTCTCCTTCGCCTGCTAATAAAGAAAGCAGCGTCTCAGCCGTGTATCACCAGAACAACAGACAGCCCGGCGGCGGAGGGAACGCCGCACCGAGACCCGCCTGGACCCGCTTTATTGTCTCTTTGACTGGGTGGATTTCTGTGTGAAGATGGCTTATCTGGCCGCGCTGTTGTTGCTGCCTGTCCTGTGTAGCATCATCAGCACCTCCAGCGCTGCATCCTCAGTATCCCGGAAATGTGAGGACAGCTTGGCCACTCCTCTCCCCTACAGCTCCTTCACCAGTTCATCTGTGTACGCACGAGGATGTGGAGCTGGTTACGCCAAACTCAATCGGAAACAAGGTGCTGGAGGATGGTCGCCCTTGGATACAGATCGTTACCAGTGGTTACAGGTGGACCTGGGTTCTAGGAAGCAGGTGGTTGCCATAGCTACACAGGGTCGCTACAGTAGCTCTGATTGGACCAGCAAGTACCGGCTGCTTTACAGCGACACGCAGAAAAACTGGAGGCCGTATCTACAGGATGGAAACATCTGGACGTTTGAGGGGAACGTGAACAGTGAGGGAGTTGTTCGCTTTGAGCTGCAGCACGCCATCCTGGCTCGCTACATCCGCTTCATCCCAGTGGAATGGAGCAGGGAGGGACGCATCGGAGTACGCCTGGAACTCTACGGCTGCTCATACTGGGCCGATGTGATCAGTTTTGAAGGCCATGGTGTCATCCCCTACCGCTTCAGGAGTAAGAAGATAAAGATTGCGAAGGACGTCATCTCTCTTAAGTTCAGAACCACGGCGGCAGACGGGGTCCTGCTCCACGGAGAGGGACAGCAGGGAGACTACATTTCCCTGGAGCTCAGCAGGGCCAGACTGCAGCTCAGCCTCAACTTAGGCAGTAACCAGTACGGATCCATTCAGGGGCACACCTCTGTGACCAGTGGGAGCTTACTGGATGATGACCACTGGCACTCAGTTGTCATAGAGCGTTACCGCAGGAACGTCAACTTCACCCTGGACCATCACACTCAGCAGTTCAGGACCAATGGAGAGTTTGACCACCTGGACCTGGACTATGAGATCAGTTTCGGAGGACTGCCTGTATCAGCGAAGCCAAGCTCCGGAGGCAGAGATAACTTTGTGGGATGCATGGAGGGGATCACCTACAACGGAGACAACATCACTAATCTGGTCCGCAGGAAGAAGGTGGACACCTCCAGCTTCCGTAACCTGACATTTTCGTGTGCTGAGTCCAACTCCTTCTCCGTCTTCTTCAACTCCACGTCCTTCCTGCGGCTGCCGGGTCAGAGTGACAGCGACActctgtcagtcagtctgtcttTCAGGACGTGGAACCCCAACGGGCTGCTGATGTTCACGGCGCTGGCTGACGGCTGGGTGGAGGTGGGACTGACGGAGGGCAAGGTCACCGTCTTCATGAATGTGACGCAGAAGAAGAACACACGCATTGACATCTCATCAGGTTCCGGTCTGAATGATGGCCAGTGGCACAGTGTGCATCTGAACGCATTGGAGAACTATGCTATGCTGACAGTCGATGGAGACGAGGCATCCACAGTCAGAACGGCCATCCCCATCCAGATCCAGACTGGAGGAAGCTACTACTTTGGAGgcaACTTTCTGCCCTCCAACACCCGATCACTTCAGCGCTCCTTCCAGGGCTGCATGCAGATGATCCACATAGACGACCATCTGGCCGACCTCAGGGCTGTGGAGCAGGGCCTCATTGGAACCTTTGAAAATGTCAGCCTGGATATGTGCGCCATTATAGACAGGTGTGTTCCTAATTACTGTGAGCACGGTGGCCGCTGTTCTCAGACGTGGGATACGTTCAGCTGCAACTGTAGCGGCACTGGATACACTGGAGCTACCTGCCATACATCGATGTTTCAGCAGTCCTGTGAGGAGTATAAGCACCAGGGGAAGAGCTCCGGGAGCTACTGGATTGACCCAGACGGCAGTGGATCTATCACCCCCTTTAGAGTCAGCTGTGACATGACAGAGGAAAAGGTTTGGACCGTGCTGAAGAACAACCTGTCTCCTCAGACATCAGTCACCAGTGCAGACCAGGAGGGGAAGGCAGTGCTGCAGATCACTTACAACGTGACTGATGAGCAGGTGTTGTCAGTCACCAGCAGTGCAGCGTACTGTGACCAGTATGTAGCCTACGCCTGCCGAATGTCTCGTCTGCTCAACACTCCTGATGGCGTCCCGTTTACCTGGTGGGTAGGAAGAGCCAATGAGAGGCATTCTTACTGGGGGGGCTCAGGACCAGGGATACAGAAGTGTTCCTGTGGTATCGAACACAACTGTACTGACGCCAAACACTACTGCAACTGTGATGCTGACCTGCGCAATTGGAGGGAGGATGCAGGCCTATTGGTGTATAAAGACCATTTGCCAGTCAATCAGGTTGTGGTTGGTGATACAAGCAGAGCTGGATCTGAGGCCAAACTGACTGTAGGGCCACTCAAATGCCATGGGGACCGGAACTTCTGGAACGCAGCGTCCTTCACCAGCCCTGCCTCCTACCTCCACTTCCCTTCCTTCAGAGGAGAAACCAGCACCGACATCTCCTTTTACTTTAAGACTTCGTCCACTCACGGAGTCTTTCTTGACAACCTGGGAACCACCGACTTCCTTCACATTGAACTCAGAGGAGGCTCTATGGTCCTCTTCTCTTTTGACGTTGGCAGAGAGCGGGTGGAGCTCAGCGTCCGCTCGCCGGTGCCTCTGAATGACGACCAATGGCATCGCGTGGAGGCTGAGAAGAACATCAAGGAGGCGGTTCTACAGCTTAATGGACAGTACAGAGAGATCAGACCCATGCCCCCACAGGGACACACAAAACTGGAGTTCTACAGTGACCTATATGTTGGTGCCTCGAGTGGTCAGAGGGGTTTCCTGGGCTGCATGCGGGCTCTGAAGATAAATggtgtgacctttgacctggagGAGAGGGCGAGGGTAACTCCAGGGGTGAATCCAGGCTGCCAGGGCCACTGCAGCAGCTACAGGATGCACTGCAGGAACGGAGGGAAGTGTGTGGAGCAGTACAATGGATACGCATGTGACTGCTCCCTCACCGCGTATGATGGACCCTTCTGCACCGATGaTGTAGGCGGCTACTTTGAGACGGGCACCCTGGTGCGTTACGACTTCCTGCCAGAGGCGGGCGCTTCTGTGTTGCAGGAAGCGAAGAGCATATCAGGTGTTGGTGTTCCGAGTGAGGCCAACCTGACTCAGGAGGAGCTGGTGTTCAGCTTCAGCACCTCCAGCGCTCCCAGCATCCTGGTCTACATCAGCTCCAGAACTCAGGACTACCTCGCTGTGGTGCTCAGGCACAACGgcacCCTCCAGATCCGCTATAGTCTTGGGGGGCTAACAGAACCTTACACCATAGATGTTGACCATCGTAACATGGCCAACGGACAGCCACACTCTGTCAACATAACTAGGTACTTAAGGGAGATACGACTACAGCTGGACCACTACCCAGTGTCCACATACACCCTACCCGAGGCCTCCGACACCCAGTTCAACTTGGTCAAAAGTATCTTTCTTGGAAAGGTCTTTGAAACTGGACAGATTGACCCGATCCTAATCGAGCGCTACAACACGCCGGGCTTTGTGGGCTGTCTGTCAAGAGTTCAGTGGAACAGGGTGGCGCCGTTGAAAGCGGCGCTGCGCTCGGGACTGGCGGCACCCGTCAGCACCCATGGAATTTTGGTCCCATCGAACTGTGGAGCCTCACCCCTGACCATCTCCCCCATGGCCTCGGCTATGGACCCCTGGCACGTAGAAGCAGCTGGAGCTGTTTTTCCCTTTAATGAGGACCAGGCCAGTGGTGATGGAGTGGATCGCAACTCTGCCATAATTGGAGgcATCATCTCCATGGTGATCTTCACTGTCCTGTGCATCATGGTGTTTGTGATCCGTCATATGTTCCGTCACAAAGGCTCCTACCACACCAACGAAGCCAAGGGAGCGGACTCGGCAGACTGCGCTGACGCAGCGATCATCGTCAATGACCCCGCCTTCACCGAAACCATTGACGAGAGCAAGAAGGAGTGGTTCATCTGAGCCCCTTCCAACAACACGGACACATGACGTTAGGATGTATGTAGTTTTCTAAGCATAGGGATTAGTAGTGAGGTCACCACCTGTGGAACCTCGAGGATGTGCCGAGTGGTTTATTTAAAAGAACTTTATGGACAATGGACACCATGGCGTTAAAGCGGCAGTGTGTATTAAAGCACAGGGCACAGTGGTGCCTGGCAGAGCCCTGTGTCCAGATGTGGAGCGGTTTGATTTCATTTACAATGGACAACGTGACAGCCTTCTGATGGTGTAGAGGGACGGCGCCAAGAAGTTACAGGCCTtgaatgagtgagtgtgttcccTAGCtttaatttatgtatttatatcatttttttatttgatttcagttaaatttatgttatttatttatttatctatccaTATTTAAGTCATATATTTTTTCATAAAAGTTCTTACTTTGTtaaggtttatttatttttatagattCATATCTTTATGCCTTTGTGCAATGTGCTGGTATTTCAGAaaattataatattaatggtAATGAACATTGATCCATTAATCCCAATACTCCTCCACAACTGTAGCAATTCTCATAAATtccaggttttttttaaatgttaaatcgcATGTTTAATAATTTGccttatttttaatttatttcactAAAGTTTAATTTTAGCCTTAAGACTGAAaacgttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcactgacTGAGTTGTCTGTAAAGGAGATGTAGCCATGACTTTGTTCGCATCGTTTGGACTAATAACGGAAAGGAAACGTCACACTTCTCTTTATTTTTGCATCTACTTAACAGACAAGTGTCTCTTAATGACTTTAAAGCATTGATTGTTGAAACTCCAAATGTTATTTTACTGTTTCTGCTGCCAAATGAGTTCAGGGGTTCAGCTTTTAAACAATGAACTGAGTCCTGTCAGTCCACAACAACCCAactcactttttttcttctttttttttttttagatttgagGCAGGGGTTTTCTATTGTTAGCAATGCCAGTACATAATAATGCAAAAATGCTTGTCCATAAGTGTCTGTGTTTTATTCACTTGTGATGGGTCTAGACTAGGAGTTTCCTGCATCCAGTCGTTGTGCTATCTCTGTGCTGGATGATGCAGTGATACTGATCATCTCGTCTAAGAGCAAAACAAGTAACTTGCCAAAATGCTACTTTCTCTTTTCTTGAAGTTATCAGCCTCTAATGGCAGCATGTTAGGAGTTACAATTCCCTCAGCTGAAAAGAGTCGTTCTTATATCCATTTAACATAGTATTTTTGAACGATTCACCAGTGTTAATGATGCTTAGTGAATTTGGGGTTAAGATAGCATGTGTGTGGCCATGTTAAGGACTGAGGCCAGCCTCTTCCTGAAGTGGGATGGCTACTCTATCAGCTCTTGGCTAACTCTTCTGATGGACTGAAAGGACTCTTAGTTCAGGGTTCTTCAAAAAAAACCTGTCCTGTAAAAACCTGAGTCTTTGATTTGTATGAAGTAGGAGGTCGTTTCTGGAAAAGAATGTTTGTTACCCACAGACAAAACTATGGCATACATCCTGACATTTGATTGTATCGCATTTGCATTCCTTTGACTTCAATGCAGTGTAATGGCATGCTGTTAAGACACTGAATGACACACATATTTCTGTTTGATAAGCCACTATAGCATCACATTGCTTTTTCTTCATGTACATGTATAAAACTTTGCTTAACTGTTCTTTTTATAGCTGATTTCTCACTTTGTGCTTTCTCATTGTCTTGAATGATTTGATGCTCCCTATTTGGAAAGACCAGTAAAATATGAGAACAAATCTGA

Function

NR:

description
contactin-associated protein-like 2

GO:

id name namespace
GO:0007155 cell adhesion biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K07380 CNTNAP2; contactin associated protein-like 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815670.1 True 6292 mRNA 0.50 25 8103401 8136557

Neighbor

gene id symbol gene type direction distance location
LOC120567605 LOC101471767,LOC104938020,LOC102193348,LOC100709377,LOC103374359 coding downstream 17475 8079296 ~ 8085926 (-)
tmem70 NA coding downstream 35952 8063083 ~ 8067449 (-)
LOC120568123 xpr1,LOC101080083,LOC103396762 coding downstream 80495 7971949 ~ 8022906 (-)
ttpa ttpa coding downstream 142334 7952012 ~ 7961067 (-)
asph asph,LOC103370744,LOC108250906 coding downstream 164624 7904205 ~ 7938777 (-)
ccr12a LOC101473018,LOC104945947 coding upstream 3675 8140232 ~ 8146892 (-)
LOC120568280 LOC104938035,LOC103362163,LOC102210891,LOC102784122 coding upstream 13667 8150224 ~ 8158788 (-)
LOC120569115 LOC103362161 coding upstream 41728 8178285 ~ 8187676 (-)
tgs1 tgs1,LOC106942483,LOC106912366 coding upstream 52846 8189403 ~ 8203101 (-)
xkr4 xkr4 coding upstream 95717 8232274 ~ 8249635 (-)
G112903 LOC104931871 non-coding downstream 43368 8056602 ~ 8060033 (-)
G112902 NA non-coding downstream 57920 8044110 ~ 8045481 (-)
G112876 NA non-coding downstream 134067 7967433 ~ 7969334 (-)
G112877 NA non-coding downstream 137096 7964439 ~ 7966305 (-)
G112887 NA non-coding downstream 177209 7924102 ~ 7926192 (-)
G112897 NA non-coding upstream 2893 8139450 ~ 8192584 (-)
G112922 NA non-coding upstream 74270 8210827 ~ 8211057 (-)
G112924 NA non-coding upstream 75563 8212120 ~ 8212771 (-)
G112923 NA non-coding upstream 79352 8215909 ~ 8219170 (-)
G112980 NA non-coding upstream 317934 8454491 ~ 8454705 (-)
cdh6 LOC103366829,LOC104926815 other downstream 939731 7076609 ~ 7163670 (-)
si:ch211-267e7.3 LOC103370300 other downstream 1113279 6956440 ~ 6990122 (-)
zmynd11 zmynd11 other downstream 1366889 6695610 ~ 6736512 (-)
LOC120567959 NA other downstream 1924515 6172281 ~ 6178886 (-)
G112328 NA other downstream 2250954 5793163 ~ 5852447 (-)
trnak-uuu_16 NA other upstream 350910 8487467 ~ 8487539 (-)
G113070 NA other upstream 643895 8780452 ~ 8790042 (-)
chd7 chd7,LOC103370133,LOC102782711 other upstream 977827 9114384 ~ 9194872 (-)
LOC120568397 NA other upstream 1264230 9400787 ~ 9510497 (-)
brinp2 brinp2,LOC103369811 other upstream 1904129 10040686 ~ 10267078 (-)

Expression


Co-expression Network