zte38 (LOC104949683)


Basic Information

Item Value
gene id zte38
gene name LOC104949683
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14674417 ~ 14677944 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815679.1
ctcccccccctctGACAGCGGGGATGACTGAAAATGAAATACCACACTTTTATGGATTAGCTAAAGTGCCGAAAAATACGTTATTTTCTAACGATAAGaaaaaagagaaaatggcaGCCGGGAAGATGTGCATCAGGAAGAGCAAGGAGGAGACTGCCGAGTGGACAGGATTATTCCTGAATGACTTGAAAACAAAGCAAGAGTCCCTTGTCTTCGTCAAGAGGATGATGGCTGTGGCAGTCTCTTCCATCACCTACCTCAGAGGGATTTTTCCAGAGGATGCCTACAGATCCAGATATCTGGAAGATTTGTGCATCAAAGTTTTGCGTGAAGACTGCAACACCCCTGGTGCCAGCAAAGTTGTGAAATGGATGATGGGCTGCTTTGATGCATTAGAGAAGCAGTATCTCCAGATTGTATTCATTGGGGTGTACACCAATCCAGATGAACCTAATTGCATTATTGAGTCATACCAGTTCAAATTCAAATACACTGAGAAGGGGCCAGAGATGGACATACTCAGGAACAATGATGTGGAGATGCAGGTGACATTGGAGGACACCAAGAGAGCCTCGGTGCTGCTCATCAGGAAGCTCTTCCTGCTCATGCAGAACCTGGATGCCCTCCCCAACAATGTGTACCTCACCATGAAGCTCTACTATTATGATGATGTCACCCCTGCTGACTACCAACCACCAGGCTTTAAGGAGGGCGAATGTGACAACCTCTGGTTCGAAGGCATGGCTGTGCACTTCAAGGTGGGAGAGGTGCAGACAGCATTCCACACCTTGAGAGTGCGCGTGTCAGCAGAACAAGGCTGGCTGGAGAAGCTTCAAAAAGGGAACCAACTGACGGGAGCCAAACAGGTTTCTCAGAGAAATTGTCCAGAGAGGGAAGCGATTAAGGACCCTCGAAAGAAATCGTACGGCGAAGAGGATCTACCTTCCGAAGATGAGTCTGCACAGTTCAAGAAACCAAAGAGACCCCTGGCAAAGAGAAAGGCAGCTGCCAAAAATCTGTCGAGGAAGAAAAGAAGATTTTAGCcacaacattacacaaaacaaaagctTTGCTAGCAATGTAAACACAAAGGTGAactatttattaatttcaatGCAGTGTTAAACACTTGTTTAACGTTATTTTTTTAGATATAAAAATGTGTT

Function

NR:

description
HORMA domain-containing protein 1-like isoform X2

GO: NA

KEGG:

id description
K12778 HORMAD, HOP1; meiosis-specific protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815679.1 True 1166 mRNA 0.45 13 14674417 14677944

Neighbor

gene id symbol gene type direction distance location
uck2b LOC104935075,LOC103363741,LOC102787436,LOC100703739,LOC101481213 coding downstream 7212 14658872 ~ 14667205 (-)
czib LOC103363808,LOC100704007 coding downstream 16145 14653408 ~ 14658272 (-)
scp2a scp2 coding downstream 23041 14626167 ~ 14651376 (-)
LOC120567803 LOC104934906,LOC103364073,LOC103479012 coding downstream 109712 14561507 ~ 14564705 (-)
LOC120567737 NA coding downstream 120748 14551037 ~ 14553669 (-)
prdx1 prdx1,LOC103140020 coding upstream 1463 14679407 ~ 14683559 (-)
gpbp1l1 gpbp1l1 coding upstream 16505 14694449 ~ 14708330 (-)
LOC120567642 ipp coding upstream 31965 14709909 ~ 14715157 (-)
LOC120567646 pik3r3,LOC103362845,LOC104935068 coding upstream 42337 14720281 ~ 14727430 (-)
serbp1b serbp1,LOC108238257 coding upstream 120170 14798114 ~ 14809624 (-)
G114544 NA non-coding downstream 156524 14517476 ~ 14517893 (-)
G114530 NA non-coding downstream 208169 14418851 ~ 14466248 (-)
G114538 LOC104949927,LOC103364340 non-coding downstream 226484 14440881 ~ 14447933 (-)
G114518 NA non-coding downstream 353654 14319343 ~ 14320763 (-)
LOC120568036 NA non-coding downstream 502943 14124703 ~ 14171474 (-)
G114633 NA non-coding upstream 11513 14689457 ~ 14690066 (-)
G114636 NA non-coding upstream 15688 14693632 ~ 14693957 (-)
G114661 NA non-coding upstream 73301 14751245 ~ 14751528 (-)
LOC120569096 NA non-coding upstream 102332 14780276 ~ 14782472 (-)
LOC120568695 NA non-coding upstream 276634 14954578 ~ 14958403 (-)
LOC120568687 NA other downstream 56193 14613613 ~ 14618224 (-)
tfr1a NA other downstream 705606 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 1192192 13469531 ~ 13482225 (-)
G114152 NA other downstream 1585854 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 1699089 12966466 ~ 12975328 (-)
G114680 NA other upstream 117974 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 612138 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 1466216 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 1504710 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 1639474 16317418 ~ 16327426 (-)

Expression


Co-expression Network