LOC120568300 (gnal,LOC106520735)


Basic Information

Item Value
gene id LOC120568300
gene name gnal,LOC106520735
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16252963 ~ 16313801 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815709.1
CCGCAGTGTCCACTAAAGGATCAGGTGATCCACTAACTACGAAGCGAAGGCTGACTGGGGAAAATGCAAAATGACATATAGCAAATGTCAGAGCATAATTCATTCACATTTTCGGCTCAATTTCAGACTTAAATCTCACCGCTGGAGCTCCAATGTAACGATGGCTCGTTAGGTCTGGTGCCGCAACTGCgatttttttgatattttaatttatgaAAAATCACATTCACAGACAAATATTGGTTTCAACATGGGGCTGTGCTACAGTTTGCGTCCCCGGCTCTTCGGGGACCTGAGCGGATCTATCTCCAATGCTACCTCGGACTCGGATCAGCCTCCGGACACCGCCGTGCCGACCCGCGCCGTGGGACCTCGCCAGGAGGACGCCGGGGGATGCGGGGAGAGTTCGTCGCTACGCGGCGGCGGCGGCCCGGTGCGCCCCGGGGACCCTGCCAGGCTCCCGGCCGGGGAGCACCGCCGTGGAGACACCGGTACCGACGGTGTGCTCATACAAAACGGAGGTGGCGGAGGAGGAGGCGGTGGTGGCGGAGGCAGCGGTAAGGGGACAGGGAAGGACCGCGGCCGACGCTTACAGCTGCTGCAAAAGACTAGCACCCAAAAGCAGAAAAACTGGGACAAATTGCtggtggaggagaaggaggcCGAGAAGGAGGCGAAGAAACACAGTAAGAATATTGACAGGGTGCTGAAGGAGCTCAAACGGGAGTACAAACAGACGCATCGACTGCTGCTTCTCGGTGCGGGAGAGTCCGGAAAAAGCACCATTGTGAAGCAGATGAGGATTCTACACGTCAACGGCTTCAACGCAGAagaaaagaaacagaaaatccAAGATATTCGGAAAAACGTGAAGGATGCCATAGTGACTATAGTGTCTGcgatgagcactttaatacccCCAGTTCCGCTAGCCAACCCAGAGGACCAATTCAGAATCGATTACATCAAAAGCATAGCACCTCTCTCCGACTTTGACTACTCACAGGAGTTCTTTGATCATGCAAAGAAGCTGTGGGACGACGAAGGAGTGAAGGCATGCTTTGAGAGGTCCAATGAGTACCAGCTCATCGACTGTGCACAATATTTCCTGGACAGAATTGACTCCGTAAGACAGAACGACTACACACCAACGGACCAGGACCTGCTACGCTGCCGAGTGTTAACTTCAGGGATTTTCGAGACGAGGTTCCAAGTAGACAAAGTGAACTTTCACATGTTTGATGTTGGAGGCCAGAGAGATGAAAGGAGAAAATGGATCCAGTGCTTTAACGACGTCACTGCTATCAtcttcgtggtggccagcagcAGCTACAACATGGTAATAAGGGAAGACAATAACACCAACAGGCTACGGGAAGCCCTGGACCTCTTCCGCAGTATTTGGAACAACAGatggTTACGCACTATATCGGTCATATTATTCCTGAACAAGCAGGACATGCTGGCTGAGAAAGTATTAGCTGGAAAATCCAAAATTGAAGACTACTTCCCCGAATATGCTCGCTACACCATACCAAATGAAGcaactcCTGAACCTGGTGAAGACCCAAGAGTGACGAGAGCTAAGTTCTTCATCCGAGACGAGTTTCTTCGGATCAGCACTGCGAGTGGCGACGGCAGACATTACTGCTACCCCCACTTCACCTGCGCCGTGGACACAGAGAACATCCGGCGGGTGTTCAACGACTGCCGGGACATCATCCAGAGAATGCACCTGCGGCAGTACGAACTCTTGTGATGGGAGACCGCCTCCGTCAGccttctgtgtttttctccaCCATTCTGCATCCTTGACgaacccctcctcctcctcctcctccacctccaccctTTATCTCCTCACCCTTGCTCCCCCAGAGAAACCCTCAACAACCCCCTGACCACCCCTCCTGTCAAGGACTATGAAGTACTACTGAAGTGTGTCAAAATCCTCTTCCTATTATTAACTTCTTagctttttgtacttttttttttttcctctctctctcctgagaCCGATTCATCCCCATTTCACCGATGTGAAAGGAAGGTTGGGGAACAACGTTGTTGCGTGCCGcttcttgttttcttttaatcCTTCCTTTTGAATGCCTTGATTTTTGTCATTCCACTAAGCCTTGGGctacctcctttttttttttttttttttttcctttctttttttttttttcttctccccttTTGTGTCCTTCCGTTTTTGGCTTTGTCATTGGACCTGGACTGGTGGGTGTggataaa
>XM_039815710.1
CCCAGTACACAGGCAGTTTGGTTTGGGTCAGGGccacccatagacagtaaaggGGCCACCTCACTGACTGGAAGCcaacaagaagaaaaagaagaaaaagacgaagaagaagaaaaagaagaagaagaagagacccAGCCCCTCCGTAAACCAGCACAGAGAGGCGTCCGGGTTTCCACCCCTTTGCCGATTAATTTGATAGCAGGATAGCGACGGACTAAATCGGGAATGGCTCCTCTCCCTTTTCCACACAAGTTATAAAATGCTATATCAGTGCGAGTTATTAATGTTACAGTTTAACGCAGGTTTGTTTTCCACCTCCACGGTCTACGGTTACTTCCTGGTGCTACAGAGAGAGGCAGTGCTGAGTTAAAGAGACAGAAATACTGATAGAAATTCAGATAGAAAAAAATACTGAGAGAAGAGAGGGGTTGGAGACGCGATAGGAACAGTTGACTGGATTCCCAGAAATTGaaaaccctctctctctcttcctatttatatgtatttttgataTTTCTTTGTCAAACCGAGTCGTTATTCTTCGTTGGTTTGTAAACTAACACACGGTTTGGATGACGGCTGGCTGCGGCTAAAGCGGAATTGTAACGGGGGAACATATTCCTCCCTCCGACGGAGAAGCCTCGCAGAGAttgttcctttttattttacagtggaCTCATTACTGTGCTATTTTTAAACCACAAAATCATCCCGGgtgttattttatatatttttttacgaTTCCACAAGGAAGGGTTAGGGCGACGGAAGATGGGTTGTTTGGGCAACAGCAAGACTGAAGATCAACGCATCGACGAAAAGGCACAACGAGAGGCTAAtaaaaagatagaaaaacaGTTACAAAAGGAAAGACAAGCGTATAAAGCCACACACAGGCTCTTATTACTGGGTGCGGGAGAGTCCGGAAAAAGCACCATTGTGAAGCAGATGAGGATTCTACACGTCAACGGCTTCAACGCAGAagaaaagaaacagaaaatccAAGATATTCGGAAAAACGTGAAGGATGCCATAGTGACTATAGTGTCTGcgatgagcactttaatacccCCAGTTCCGCTAGCCAACCCAGAGGACCAATTCAGAATCGATTACATCAAAAGCATAGCACCTCTCTCCGACTTTGACTACTCACAGGAGTTCTTTGATCATGCAAAGAAGCTGTGGGACGACGAAGGAGTGAAGGCATGCTTTGAGAGGTCCAATGAGTACCAGCTCATCGACTGTGCACAATATTTCCTGGACAGAATTGACTCCGTAAGACAGAACGACTACACACCAACGGACCAGGACCTGCTACGCTGCCGAGTGTTAACTTCAGGGATTTTCGAGACGAGGTTCCAAGTAGACAAAGTGAACTTTCACATGTTTGATGTTGGAGGCCAGAGAGATGAAAGGAGAAAATGGATCCAGTGCTTTAACGACGTCACTGCTATCAtcttcgtggtggccagcagcAGCTACAACATGGTAATAAGGGAAGACAATAACACCAACAGGCTACGGGAAGCCCTGGACCTCTTCCGCAGTATTTGGAACAACAGatggTTACGCACTATATCGGTCATATTATTCCTGAACAAGCAGGACATGCTGGCTGAGAAAGTATTAGCTGGAAAATCCAAAATTGAAGACTACTTCCCCGAATATGCTCGCTACACCATACCAAATGAAGcaactcCTGAACCTGGTGAAGACCCAAGAGTGACGAGAGCTAAGTTCTTCATCCGAGACGAGTTTCTTCGGATCAGCACTGCGAGTGGCGACGGCAGACATTACTGCTACCCCCACTTCACCTGCGCCGTGGACACAGAGAACATCCGGCGGGTGTTCAACGACTGCCGGGACATCATCCAGAGAATGCACCTGCGGCAGTACGAACTCTTGTGATGGGAGACCGCCTCCGTCAGccttctgtgtttttctccaCCATTCTGCATCCTTGACgaacccctcctcctcctcctcctccacctccaccctTTATCTCCTCACCCTTGCTCCCCCAGAGAAACCCTCAACAACCCCCTGACCACCCCTCCTGTCAAGGACTATGAAGTACTACTGAAGTGTGTCAAAATCCTCTTCCTATTATTAACTTCTTagctttttgtacttttttttttttcctctctctctcctgagaCCGATTCATCCCCATTTCACCGATGTGAAAGGAAGGTTGGGGAACAACGTTGTTGCGTGCCGcttcttgttttcttttaatcCTTCCTTTTGAATGCCTTGATTTTTGTCATTCCACTAAGCCTTGGGctacctcctttttttttttttttttttttcctttctttttttttttttcttctccccttTTGTGTCCTTCCGTTTTTGGCTTTGTCATTGGACCTGGACTGGTGGGTGTggataaa

Function

symbol description
gnal Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-activating dopamine receptor signaling pathway and sensory perception of chemical stimulus. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Is expressed in brain; gill; head; and peripheral olfactory organ. Human ortholog(s) of this gene implicated in dystonia 25. Orthologous to human GNAL (G protein subunit alpha L).

NR:

description
PREDICTED: guanine nucleotide-binding protein G(olf) subunit alpha isoform X2

GO: NA

KEGG:

id description
K04633 GNAL; guanine nucleotide-binding protein G(olf) subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815709.1 False 2259 mRNA 0.50 12 16252963 16313801
XM_039815710.1 True 2414 mRNA 0.46 12 16271864 16313801

Neighbor

gene id symbol gene type direction distance location
pak1ip1 pak1ip1 coding upstream 26871 16222043 ~ 16226092 (+)
zfyve9a NA coding upstream 72109 16151205 ~ 16180854 (+)
LOC120569020 btf3l4,LOC100695932 coding upstream 104193 16144107 ~ 16148770 (+)
gipc2 gipc2 coding upstream 116105 16119568 ~ 16136858 (+)
dnajb4 dnajb4,LOC102785119 coding upstream 134445 16113240 ~ 16118518 (+)
LOC120568416 piezo2 coding downstream 30847 16344648 ~ 16429396 (+)
rab12 rab12 coding downstream 123780 16437581 ~ 16446542 (+)
ndufv2 ndufv2 coding downstream 239944 16553745 ~ 16560428 (+)
ankrd12 ankrd12,LOC102778611 coding downstream 248395 16562196 ~ 16609463 (+)
twsg1a twsg1 coding downstream 299773 16613574 ~ 16628872 (+)
G115136 NA non-coding upstream 3316 16242987 ~ 16249647 (+)
G115128 NA non-coding upstream 20487 16231698 ~ 16232476 (+)
G115124 NA non-coding upstream 33520 16219182 ~ 16219443 (+)
G115123 NA non-coding upstream 35269 16217462 ~ 16217694 (+)
LOC120568989 NA non-coding upstream 36598 16209910 ~ 16216365 (+)
G115223 NA non-coding downstream 116360 16430161 ~ 16431655 (+)
G115295 NA non-coding downstream 292902 16606703 ~ 16608542 (+)
G115350 LOC104967252 non-coding downstream 446634 16760435 ~ 16821676 (+)
G115404 NA non-coding downstream 843827 17157628 ~ 17158200 (+)
G115437 LOC101466820,LOC102797643,LOC103353954,LOC100700019 non-coding downstream 854772 17168573 ~ 17169818 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 24412 16226307 ~ 16228551 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other upstream 331432 15865586 ~ 15921531 (+)
st6galnac3 st6galnac3 other upstream 409869 15764683 ~ 15843094 (+)
slc35a3b LOC103357859,LOC104957008,LOC101481522,LOC102792347 other upstream 684469 15554471 ~ 15568494 (+)
zgc:153115 klf13,LOC104948390,LOC103358333,LOC101073550,LOC105030379,LOC106568757,LOC107752329 other upstream 724194 15520782 ~ 15528769 (+)
LOC120568419 LOC102779359 other downstream 125224 16439025 ~ 16527682 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other downstream 296575 16610376 ~ 16612206 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other downstream 1092696 17406497 ~ 17483553 (+)
LOC120567767 NA other downstream 1713479 18027280 ~ 18029895 (+)
G115729 NA other downstream 1991348 18305149 ~ 18354344 (+)

Expression


Co-expression Network