LOC120568303 (LOC104957792,LOC103356898)


Basic Information

Item Value
gene id LOC120568303
gene name LOC104957792,LOC103356898
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26387680 ~ 26393785 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815714.1
AGACTTCTAATGCTCTATTGTGccattttctgtctttacactcTGTAATATAACAAGGGTTAAATGCTGCCGAAGATGTTAACCATGTGGGCACCTGTTGTACTCTTTTACCAACCACTGTCTATATGCAGGACACGAGGGAGGGGCATTATGGTACTTTGTTGTGGAGGAATATACTGTAGAGTGCTGCATGCAGCTGCAGACTGTGcaagctgagtgtgtgtgtgatgtgaatAAGAAGGAGGCTGAGGCTGGCTGCTGTGATGAAATCACTTTGTTTTAAGGGGAGGCTGTTTATATTGGTGCCATAGAACTGTCTGAACCTGCTGATGGCTGTAAGGAACCTTGAGTGGTAAATTCAAGAGTtaaattacatatttatttttgttgaattGTAAGCCTTCGTTTTATAtaaagaaaacttttttttttccatttagtTTTTGTTATACTATACAAGTGGACTTTGCACCAAGACTTCAAAACTACAATTGCCTGGATCATTAATGAAcctttaatcaatgattttctCTGAGTTTCACACCATGTCAGCGGTGACCAATCAGCCTCTTCCCTTTGGTGGACTGGAGCGAGAGAAGCACATCCAGATGATCTTCAGAGCTTTCCAGAACCGCTGTGGGCCCTCATGTGAGTGCCACACTCACTCACCTGGACCCAAACTCCACCAAACGCCTCCAGACTGGGAATCTGGTGAGCGTCTGGCTCCTGGGAGGAAGATGGAGAACTGCTACACGCAGCCACCAGGGAAAGTGAGCAGACCAGGGGTGGAGGAGCAGCGGCCTGGAGGTGCAGCAGGATCACACTTTATGTCTGTGCTGGAAACAGTCAGTCAGATACAAATCACTGCCAGACCACAGCTGCAAGGTCCACAGTGTGTTCCCAGGAGGATTTACAGCATCACCACAGGAAGCAGCAGGTCCCAGTTATTTGTGGCTATGGAAGAGAGTTCTTGTGTGTGCCTCCAGTGTTGCGGTCCAGCTCGGGCCTGTTCTTTGCAGGGCTTCGACTGCCAGGGCCGGCaggtcttttattttgaaaggccccTTAGGGTGGACGCCTGCTGCCTTGGCTGCTGCCTGATGGAGATCAGGGCCTACACACCTCAAAAACATCTCGTTGGCACCGTATGTCAGAGGTGGAGCATGTTCACCCCTCTCCTGGAAACGTGTGACTCAGAAGGAGCATCGACCTTCAGAATCCAGGGCTCCTGCTGTCCATACCGCTGCTTCTCCAACCAGCAGTTCCAGATTGTCTCCAGCATTGGTGAGAAGATTGGAACGATATGGAAGAAATGGCCTGGTTTCAATGACGAACATAACATGGACCATGAATACTTTGGGTTGGAGGTGCCGCTGGATATGGAATCACACAataaactgctgctgctggcagccACTTTCCTGTTGAATTACATGTTCTTTGAAATGAGCTGATTAATGAAAAGGATCAATCAAGACGTTGAAAGTGGGCTGTAACTAGTGAGGAACACCAGCCGAGTCACTTTATAGTACAAGACACCGCCTCATTTAATTGCATTTGAAATATAACAGTTGAAACATCCGTTTCaacatacatttattaaaagtaaatgACACTAAACAAGCTTTAGCAGCAGCTGcatatttgacatttattgCTATAATCCATCAGGTGTACATCCAGCAGTGTTTGACACACACCTGTACCCATCATCACACCACCTATTACGGGCagcattacagtttttcaacaAACCATAGGCGCTTTCTTGACGTGGTTCCGAAAAATGCTCCAGAGGAATTGATAAAAACTGTAACAGACCCTGACCCTGGGCccagtttcattttttttcttcttttactacaAAATGGAAAAGGGAGTGAAGGTCAGTGTTTCAGGACTCCTATACACCTTTGAGGACATTAAAGCAGAGCCCATCGCTTGGATTCTTTCAAGGTGGGATAAAGACAAaacagacagaaggaaaaaCTGGGTCGGGTTGGGCTCGAGGCCAGGCACAGTGATTCAGGCAGCTTGGCAGTCCATTCTTAAGATGCCGGTTATACAACCTTCTGCCCAACACAGGATGGTCCTCATCCTTTGGGATTCAACCTCCAGGTCAAAGATAGAGAATCATTGCTGATTCAGTTACGTGATCTTTTTAAGTAGACTGTATTTACAAATATATCGTACACAATAATAGTTATCATTCCAGTTTGAAATGACCAGAGGAATTGTAGTTAAAATACAGCACTGTAATAAAATAACATCTACCTGCAACCCTGTTTGAGTCCCAATAAGACAGATTAACACAGATTCATTTTAAACAGCAGGACGTGTGATGTTATGCTAAGCAATACGATCTGACCTAGGTTATATAACAGATtggttttgttgtattttgtcaAGTACAATTTGTTAACAGCTAATGACCAGATCAGCAAACACCAGTCACATGGCCTCCCTCTGGTGGCAAGTTAACAGATGTTACAACTtgcattaataaaaaataaaaaataaaa
>XM_039815715.1
GCAGGATTTCAATTACATGGCTGAGTGGTGCCTTTCTAGCCCAACAAAAGGCAGATCCGGCTGGTTGGGATGGAAACAGAGTCAGGGGGTGAGACAGAGGGGAcaagagacacacccacacactcacaaagcCAAACATGACCATGTGaatattcacacaaacacacataggtGGTAAGGAGGTTTGTGCTTCACCCCTCCGGATCATGATGACTCCTGGATGTTTGCCTGGCCTCGGCCTTCTCCCACTCCGATTATCAGAGTAATCCTCCAGAGTCAGGAGGAGGTTGACCACAGATGTTTCACACCATGTCAGCGGTGACCAATCAGCCTCTTCCCTTTGGTGGACTGGAGCGAGAGAAGCACATCCAGATGATCTTCAGAGCTTTCCAGAACCGCTGTGGGCCCTCATGTGAGTGCCACACTCACTCACCTGGACCCAAACTCCACCAAACGCCTCCAGACTGGGAATCTGGTGAGCGTCTGGCTCCTGGGAGGAAGATGGAGAACTGCTACACGCAGCCACCAGGGAAAGTGAGCAGACCAGGGGTGGAGGAGCAGCGGCCTGGAGGTGCAGCAGGATCACACTTTATGTCTGTGCTGGAAACAGTCAGTCAGATACAAATCACTGCCAGACCACAGCTGCAAGGTCCACAGTGTGTTCCCAGGAGGATTTACAGCATCACCACAGGAAGCAGCAGGTCCCAGTTATTTGTGGCTATGGAAGAGAGTTCTTGTGTGTGCCTCCAGTGTTGCGGTCCAGCTCGGGCCTGTTCTTTGCAGGGCTTCGACTGCCAGGGCCGGCaggtcttttattttgaaaggccccTTAGGGTGGACGCCTGCTGCCTTGGCTGCTGCCTGATGGAGATCAGGGCCTACACACCTCAAAAACATCTCGTTGGCACCGTATGTCAGAGGTGGAGCATGTTCACCCCTCTCCTGGAAACGTGTGACTCAGAAGGAGCATCGACCTTCAGAATCCAGGGCTCCTGCTGTCCATACCGCTGCTTCTCCAACCAGCAGTTCCAGATTGTCTCCAGCATTGGTGAGAAGATTGGAACGATATGGAAGAAATGGCCTGGTTTCAATGACGAACATAACATGGACCATGAATACTTTGGGTTGGAGGTGCCGCTGGATATGGAATCACACAataaactgctgctgctggcagccACTTTCCTGTTGAATTACATGTTCTTTGAAATGAGCTGATTAATGAAAAGGATCAATCAAGACGTTGAAAGTGGGCTGTAACTAGTGAGGAACACCAGCCGAGTCACTTTATAGTACAAGACACCGCCTCATTTAATTGCATTTGAAATATAACAGTTGAAACATCCGTTTCaacatacatttattaaaagtaaatgACACTAAACAAGCTTTAGCAGCAGCTGcatatttgacatttattgCTATAATCCATCAGGTGTACATCCAGCAGTGTTTGACACACACCTGTACCCATCATCACACCACCTATTACGGGCagcattacagtttttcaacaAACCATAGGCGCTTTCTTGACGTGGTTCCGAAAAATGCTCCAGAGGAATTGATAAAAACTGTAACAGACCCTGACCCTGGGCccagtttcattttttttcttcttttactacaAAATGGAAAAGGGAGTGAAGGTCAGTGTTTCAGGACTCCTATACACCTTTGAGGACATTAAAGCAGAGCCCATCGCTTGGATTCTTTCAAGGTGGGATAAAGACAAaacagacagaaggaaaaaCTGGGTCGGGTTGGGCTCGAGGCCAGGCACAGTGATTCAGGCAGCTTGGCAGTCCATTCTTAAGATGCCGGTTATACAACCTTCTGCCCAACACAGGATGGTCCTCATCCTTTGGGATTCAACCTCCAGGTCAAAGATAGAGAATCATTGCTGATTCAGTTACGTGATCTTTTTAAGTAGACTGTATTTACAAATATATCGTACACAATAATAGTTATCATTCCAGTTTGAAATGACCAGAGGAATTGTAGTTAAAATACAGCACTGTAATAAAATAACATCTACCTGCAACCCTGTTTGAGTCCCAATAAGACAGATTAACACAGATTCATTTTAAACAGCAGGACGTGTGATGTTATGCTAAGCAATACGATCTGACCTAGGTTATATAACAGATtggttttgttgtattttgtcaAGTACAATTTGTTAACAGCTAATGACCAGATCAGCAAACACCAGTCACATGGCCTCCCTCTGGTGGCAAGTTAACAGATGTTACAACTtgcattaataaaaaataaaaaataaaa

Function

NR:

description
PREDICTED: phospholipid scramblase family member 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815714.1 True 2522 mRNA 0.44 8 26387989 26393785
XM_039815715.1 False 2286 mRNA 0.46 8 26387680 26393785

Neighbor

gene id symbol gene type direction distance location
chrng chrng coding upstream 158 26369787 ~ 26387522 (+)
prss56 prss56,LOC102789963 coding upstream 19424 26361135 ~ 26368256 (+)
alg3 alg3 coding upstream 53359 26330224 ~ 26334321 (+)
yeats2 yeats2 coding upstream 192800 26166546 ~ 26194880 (+)
klhl24a klhl24 coding upstream 224168 26139661 ~ 26163512 (+)
ticam1 NA coding downstream 41965 26435750 ~ 26439450 (+)
camsap2b LOC102288635,LOC100701512,LOC103357628 coding downstream 46950 26440735 ~ 26479429 (+)
LOC120569037 NA coding downstream 115143 26508928 ~ 26521103 (+)
fndc7a NA coding downstream 131160 26524945 ~ 26535699 (+)
LOC120567673 NA coding downstream 140711 26534496 ~ 26553081 (+)
G118009 NA non-coding upstream 73050 26314265 ~ 26314630 (+)
G117938 NA non-coding upstream 178809 26208356 ~ 26208871 (+)
G117933 NA non-coding upstream 182850 26204611 ~ 26204830 (+)
G117917 NA non-coding upstream 321841 26058254 ~ 26065839 (+)
G117847 pax7,LOC106964226,LOC102296763 non-coding upstream 470958 25916500 ~ 25916722 (+)
G118095 NA non-coding downstream 138381 26532166 ~ 26601409 (+)
G118098 NA non-coding downstream 154871 26548656 ~ 26605084 (+)
G118115 NA non-coding downstream 208871 26602656 ~ 26674451 (+)
G118135 NA non-coding downstream 268497 26662282 ~ 26664844 (+)
LOC120569009 NA non-coding downstream 349956 26743741 ~ 26763260 (+)
ece2a ece2,LOC103356888 other upstream 78133 26217998 ~ 26309547 (+)
LOC120568800 NA other upstream 170639 26214432 ~ 26217041 (+)
LOC120567655 LOC103356880,LOC101482764,LOC104966182,LOC107087304 other upstream 336581 26048789 ~ 26051099 (+)
G117829 NA other upstream 556985 25829764 ~ 25830695 (+)
LOC120568895 NA other upstream 593726 25773777 ~ 25793954 (+)
G118011 eif4e2 other downstream 1641 26395426 ~ 26402078 (+)
ccl20a.3 NA other downstream 22723 26416508 ~ 26418008 (+)
wdr47a wdr47,LOC102290984 other downstream 27669 26421454 ~ 26496809 (+)
prkab2 prkab2,LOC101470867,LOC107384083,LOC102226598 other downstream 196997 26590782 ~ 26600072 (+)
G118149 NA other downstream 371707 26765492 ~ 26769911 (+)

Expression


Co-expression Network