map6d1


Basic Information

Item Value
gene id map6d1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26195843 ~ 26203560 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815723.1
CTGGCAAGGGTTAAGGTAGCCTACTAAAGTAACATCAGTGATGGCAAGTTAGAAGCCATACAActatttgattacattttcccGATTTTAATTGCGCAAGTGCCTGGAGGAGAatgataataacaacaacaacgttTCTTTGATTTTGGAATCGGATGCGCGCGCTCTGGACCCCGGCTGGAGATGCGGAAAATAATTTGCAACAGATTCCTCTGCATAGTGGAGGCACTATCACAGACCACGTGAGAGGAATTTTCAATGACGGTCCCCGACAGACCGGTTCCTTTCTGCTGGCACTCCTCTGCTGCTGACATGGACTCTTGGACACTACATCCTCTCAGCTTCTCACAAACTGACGTGGAGTGAGGGCGATACTATGTCTGAATGTAACCTTTGATCTTTTGCcgctttctcttctttttctgttcttttttttgtttggttttcttcCGCTCTCCTCTTCCCTCCGCAAATCAAACAGttagggtggtggtggtggtggtggtgttgttgttggtggGGGTATGGCTTGGCCGTGCATCAGCAGAGTGTGCTGCCTGGCTCGCTTCTGGAACCAGTTCGACAAATCGGACCTCTCCGTCCCGCTCACCATCCAGAACTACTCGGACATCGGCGAGCAGGAGGTGCGGTCCGTAACCAAACAGGTCTCCGCGTCGGAGCGCGCACCCGGGAATAACTACTCGACCCCGGAACCGCGTGCCGCCGGCGCCACTCATGCGCCCAAAGATGGCCCGGGGACCCGAGGATCTTTCAGGGCACGGAAGGATGGCAGTTACAAGCCCCGGGAGGACTACCACCCGCCCGGAGTGCCTTTCAACAGTGTTACCCAGTACAAGCAGGATTTCAAACCCTGGCCCATTCCCAGGAAGGGGAACTTCCCTTGGATTAGTAACGGGGGCAGCAGGGCAGACAGTGTTCCGGACAGCCCGGTGAACGGTTACCACAGCCAGGCGACaccgggggagagagaggagcggGGCAGGGGGCTGGGGAGCGGGGAGCAGCATTGGATGGAGGAGAGCAAAACCAGCTCCTACAGGCAAGAGTACAGGCCGTGGACAGGGGTGAGACCAGCCAAAAGTGCGAGGAAAAATCCTCCAGCTCAATACTCAAGCCCAGGGACAGAGGCCACCCAGGTCCCGCGTGAGACTAGCTACCAGGCTGCCTACAGCGGGGAGCTCCACAGGTCCATTGGGCTGCACCATGGGGAGCACAATATTGCATCTGCTGCCTCCAACATACAACCTGCTGCTGTCCCCCAGCCCATCCCCACTGCCATGCAAGCTGGCAGTTCACCCATCCCCTCCAGCATCCAGCAGAGCGTCCCGCTTCAGAGGGCCGAGCTCAGTACAACAACCATGGGAGAGGAACATCTGGTGAGGACCAAGTTCCCTCCGAACTCTTCTGCGGTCTTTCAAAGCGGGCCCAGGGTCTTCAACATCTGACAGCTGCTCCGATTTCCAACCATTCCAACTTTAGAGCGGTTTCAGTTTGAAGGAATCAACCGGAGAATGATGTGTCAACGAAGTCCATTCCACAACACAGTAATCTATGCGAGGGAATGTATATTGTTGTGAAGCCTGTGGCGCTGCAGCGTCAGTATCCCAACTTGAGCCAGGTAGATAGCAACCCCCGTCCCCCCGTCCCCCCACCCCAACCCTCCTTTTACACTCCTTCCTGCCCTTGTTGCTATGGAAATGAATATGCATGTAACTAAATAGTTTTAAAACAAGCTTTTTTGGTTTGCTTTTGCAGTTATAGATGCACAAGAAACTGGCTGCTCTGTGTTTGTAtgggtgagtttgtgtgtgtgtgtgtgcacctgcTGATTTGTCCTTTTATTGTACACCATGTTGAGTCTGCTCCAATAATGAATGAACTGGTTGGTCATTAAGTGTGTATGCTTAGAGTATTATGTTGCCCTTTGGTGTTCTGCTTGAAATCTGCTAGAAAGTAAGTTATTTATTTGCTCAGTATTCAATTAGTTTACTATTTCGCAGAAGTATTGTTTGGTCTATTATTTTGTAAATCTAttgttaaagaaaaataaatatataatgtaagTGAAATTACAATAAAAGAATATTAGGTTCTTAGCACGTTCTATGA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: MAP6 domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815723.1 True 2130 mRNA 0.51 3 26195843 26203560

Neighbor

gene id symbol gene type direction distance location
LOC120567824 LOC106676181,LOC105890570,LOC105912786,LOC106632393 coding downstream 137271 26052099 ~ 26058572 (-)
LOC120568966 LOC104919207,LOC103356876,LOC108245539 coding downstream 206896 25972731 ~ 25988947 (-)
LOC120568965 LOC104919208,LOC101171526,LOC104966176,LOC103396005,LOC101079252 coding downstream 227423 25963373 ~ 25968420 (-)
pax3a LOC103356872 coding downstream 278070 25895638 ~ 25917773 (-)
LOC120568225 LOC103359193 coding downstream 1059884 25114378 ~ 25135959 (-)
mul1a mul1 coding upstream 121928 26325488 ~ 26330262 (-)
vwa5b2 vwa5b2,LOC104957800 coding upstream 130880 26334440 ~ 26348151 (-)
eif4e2 eif4e2,LOC102778094 coding upstream 189329 26392889 ~ 26400884 (-)
capn10 capn10 coding upstream 197422 26400982 ~ 26410408 (-)
ccl20a.4 NA coding upstream 207607 26411167 ~ 26412103 (-)
G117993 NA non-coding downstream 959 26193007 ~ 26194884 (-)
G117957 NA non-coding downstream 93754 26097593 ~ 26102089 (-)
LOC120567720 NA non-coding downstream 109499 26064589 ~ 26086344 (-)
G117899 LOC103356880,LOC101482764,LOC104966182,LOC107087304 non-coding downstream 144765 26048930 ~ 26051078 (-)
LOC120568967 NA non-coding downstream 203634 25989412 ~ 25992209 (-)
G117994 NA non-coding upstream 6789 26210349 ~ 26210668 (-)
G117995 NA non-coding upstream 7948 26211508 ~ 26211748 (-)
G118002 NA non-coding upstream 105227 26308787 ~ 26309326 (-)
LOC120569074 NA non-coding upstream 217890 26421450 ~ 26426798 (-)
G118075 NA non-coding upstream 270327 26473887 ~ 26474956 (-)
G117732 NA other downstream 1272525 24922203 ~ 24923318 (-)
G117560 NA other downstream 1659347 24499380 ~ 24536496 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 2339222 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 2704231 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 2764851 23430366 ~ 23430992 (-)
camk2n1a camk2n2 other upstream 112210 26315770 ~ 26319595 (-)
G118175 NA other upstream 458061 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 616278 26819838 ~ 26824570 (-)
LOC120568986 epha4,LOC100711706 other upstream 1439767 27643327 ~ 27675360 (-)
G118524 NA other upstream 1509907 27713467 ~ 27718759 (-)

Expression


Co-expression Network