si:ch211-252f13.5 (LOC104963693,LOC102078510,LOC102307931,LOC101471818)


Basic Information

Item Value
gene id si:ch211-252f13.5
gene name LOC104963693,LOC102078510,LOC102307931,LOC101471818
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13569349 ~ 13575574 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815730.1
ACTGTGGTGCGCGCAATGGAGACAAGCTGAATGTCTGTGCAATCCCTTGTTCAAGATCAATTGGCACGTACATGTATGGACAATCACTAATTTGAGGGATTTTTCTCTCTCAGAGAGATGATCAAAAAATATCTACAAGACTGAAGGATTGGTGCGCAAAAAGGGCCACCATTCAGCCGTGCCCTGATTCCGTTTTTACCTTTCGGCATTGCAACATGGCACGTATCTCTACCATATTTTTACTCTGTGTAACATATTTACTCAGTGGAGCTGAGAGCGTATCTGAGATGTGCCGGGGTACGCGCTGCTTCTCTGGCCAAGACTGGAGCAGACCGTGCGTCGGAGCGCACTGCCAGGGGCGCACAGAGCCAGCGGCGTCCCGACGACAGTTTCACCACACTGCACAATCCAGACAAGGACAAGTCTACCCGAGTTACCAACAGGATGCTCATTTCACTCATCGCCAAGCCCAGAGCGCGCCGTTAGCACCGTACACCATCATCCAACCTCAGCAGGGAGGCTTTGCGCAACCTGCGGGAACGGATGGCACCAGGAGGACGAACCCGAGAACCATCACAGCGGAGGTGTTCCACCCTGGCTGCGCCGGTGGGACCTGTCCGACCACTGTCTCTCAACGCACGACGAGTGATGACAGTGCAACACGGGAGTGTAAAGGGATTGGATGTAAACTTCCCCTCCGGATGCGCCAGAAGCCCAAGCCTTGCGTCGGAGACGGCTGCGGTACGCATGGAGGAGACGAGGGGAGAGGACACTCGCCGGTTCATGTTACAGACAGAGCGGCGCAATTTCTGGATGAGCTTCCAGACTTTGGGTCGGAACGTGGTGCATGGATACAGCTGACATGTGACATGAAACCAGGGACCAATGAGCTTCCCTCAGAGGACGCTCTTGTGCTGCAGCTACAGTTGTCTAAGAGCCAGGAGAAGCTGGTTGAGGCCCTCAGGGGCCAGCAGGACGAGGTCAGGGAGCTGCAGAGGCTCCTCAGTGAGCAGCAGGGGATGCTGGTCAACCAGCAGAGAGAAATACTGGAGCAGCAGAGAAGAATGCATGACCAGATGGAGCAAgttaAAGCCCAGTATAACATAATGATGGACAGCATCAAACACACAGCTTTCCAAAACCTCCAGGGAGAGCTAGACAGTCACATGGAAACCATGAGTGGGCAGGTTAGAGCCCACCAAGCACAGCAGGCTCTCTCTCTGCACAAGGTGGACATGGAGGCCAGCGTGATGGAGGTGGGTCGCTCCGTGTTGGCCTGTGGGAACTGCGGTTCTGAGGAGTACTGTGGCTTCAGCAGCGGTCATCCTCGCTGTGAGAAATGTACCATCTGTCCTGCTGGCTTCTTCCTGGTTGCACAGTGTTCAGTCCATGCAGACAGAATCTGCCAGGACAGAGATGAATGCCTTGAAATAGCTGATCTGTGTGGGGATCGACAGAAGTGTCTCAATACACCAGGTGGATTCCGGTGCCAGGGCATGACAGAGCGAGAAGCCAGCTCAGGAATGTGCGGCCACGCCTACTTCTACAACTCGGACATGGATGAGTGTCAGGCCTGTAATGAGTGTGATGGAGAGCCTGTGGCTTCACCTTGTACCTTCACCACAGACACCATCTGCTCtggccctgctgctgctgctggcgacagcGCCCTTTCTCTGTCCTGGACCGGAGATGTGAGTCTGCCTGGCGCAAAAGGCCACGTCCTGGCTCACGCCTTCCCTTGCGTGCAGCTTCAAATCCAGGGAAGAGGTGATCCAGGGCTGCTGTCGGCTGAGGATGGGCGCCTGGTGCTTAGGCAGCACGGTCTGGTCTGGCTGGATGAGAACCTTTCTGTGAGCCACGGCTGTCGAAGCTTCATCCAGTTGTGTCTGCGTATGAACAACACAGACGGCTCTGAGGGTCGCGACCTCAGTGGCATTAGGGTCGAGCAGCGGGAGGGAAGGTCGCTGCAGAGCGTCAGCATCAGCGGAGTAGCAGAGGTCGCCCCGGGTCACATGATCTCCCTATTCCTCCGGAGCGCCAGCCACCACTGTAACCAAAGCAGTGAAGGTCTGCAGCTGTACGACCCTTCAGCAGCTCCGCTCAGTCTCCTCTGGCTCTCCCATGACACCGGGGCTGTTGCCATGACAGCACAGGCCATGGTGTCCGCACACTACCATACAAACTATCGCCCGGTCTTCCGTACCACCTCCACCTCTGACGCTTACGTGGTGGGGCTGACTCATGACGGCCGTGGGATCCGCTTTGCAGAAAGCGGCACCGTGCGTTTTGTATTTCAGCAGGCGTTGTACTCCATGGGCCAGGCGTGTGTGAGTGAGGGCTTCCAACTGTTGGCATACCTCAACCGTAATGGAACCAGTATGGAGCTGTGCCGTACCTTCAAACCAGGCGTCCACTATCGAGACACATCCTTATCTCTGTCTGGAGTGGCTAAAGTTGGCTCTGGGGACACACTGGGCTTTGAGATCCTCTCTCCTGCTCAGTGCAACGTACGTTTCTTCGGCGACGAAACAGGCATCAGTATTCTCAGCCTGGTTTGGGTCCCCGctgctctttcttcctctctttctgccTCCGTGTCTCACACCGGCCTACCCTCAGGAGCAGTTCGAAACAAGCCGCTGTTCTTCCGCCAGACAAGCGCTCAGGTGTCCCAGATGGGGCTGCTGGGGAAGGCATCCACAGATCAGAGACAAGATTTTGTCTTCAGGGAGAGGGGCACAGCCAGTGTGGCTCTGGATCTCAAACTCATTCACTCCTGCAACCTGGTCAAGGTGACTCTTCTAAGGCGAAGTGATCCAGAAGGGTCAGTTGGTGGACGGGAGGCAGAGGGAGCGCGACCCGTCCCTCTGGCCCAGCAGGTGGGTGGTCAGATGCCCGAGGGAAGCCATTGGGCCAGTGTTAGCCTGCGGGCATCCTTCCAGGTTAGTAATGGCACAGCAGTGTTCTTCACACTGGATTGTGTACGCGGACGAGTCAATCAGATCAGCTACCAGACAGGAAGTGGAGTGTCAATCCTGTGGGTGGCAGCATAACATAAGAAAGACGAAACATGGTTTTTATATGGTTTCCAGTTCAGTAGACCAGATGTTAAGCCATTTATATAGTATGATGGACTAGTTTTATTGGTTTGATTTTACAGGAATAgttagacattttgggaaagaTGCTTACTTTGTTTCTCGTTGCAAGTTAATTCAAATTTGGCATTTATTTCATACGCATgatctaaacctaaccaaagtAGTTTTGTTTCCCAAACCTAAATGATTTCCGTGGTGCCCTGGCATGTAATTGTAATACGTTACGTGCCACCACCACGCGGTTTTAAGAGGTTGTGGTCATTTCACATATTTCTGTGAGATCGGGTtggttaaatatgaagctacagccaccagaatgttagcttagcttggaggaaacagctagcatggctccgtccaaaggtaacaaaatacaCCGATCATCACTCACAAAACTTACCAATTAACACATTCTATCTTGCTTGTACAAAAAGAGAAGTGTAAAAGCACTAATTTGACTCTTTTTTCTCAAATATggcttttatttaaaagaaaatctagCATCATGTGTTCTGTGTAGTGTAATAATTCCAACAGAAGTAGATGTAAACTATTTTCTCATTGCTTGAGTTTTCTGCTTTTGCCATGTTCAGAAATTCCATGTGCTGTAGTAgttgtgtcttttatttatgtaaTTCAGTTACTCTGTTGATGCCTGAGGACCTTCAGCTCATTCCCACTGTGACTTCAGCATTTTCTGCTGTCACCAAAAGCAGATCACTGCTGGTTTCATTCAAGAGTGTTTTTTAAGAGCATGTGTTTCATGTTAGCCGCCATTTTCTAATGTGAATATCCACTGCATGCCTTGTTTAATGACCACTTTCTTCATAATATGGAATTAAAGAGAGTCTCACTAAGGCCCAGTTGACAATCGTAATCTTAAATATTAACACCTTAAAATATAGTTACTGTTTACTCAACCTAAACTGTAATAAAGTGTATATTTGATGTTTTATATTAAAtccaataaaattaaaa

Function

NR:

description
uncharacterized protein LOC110509079

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815730.1 True 4082 mRNA 0.51 6 13569349 13575574

Neighbor

gene id symbol gene type direction distance location
LOC120568580 LOC102206875 coding downstream 103639 13440689 ~ 13465710 (-)
LOC120568786 LOC104934149,LOC103354348 coding downstream 131900 13421548 ~ 13437449 (-)
LOC120568167 slc25a30,LOC106963122,LOC103151570,LOC107086856,LOC102233249,LOC100698510,LOC102198731 coding downstream 207307 13354229 ~ 13362042 (-)
ednrba ednrb,LOC103354354 coding downstream 236344 13326841 ~ 13333005 (-)
LOC120568165 LOC104935786,LOC103354355,LOC104967951 coding downstream 251010 13311801 ~ 13318339 (-)
LOC120568814 LOC106928308,LOC103129201,LOC107086848,LOC103354342,LOC101170217,LOC106961870 coding upstream 19604 13595178 ~ 13619698 (-)
LOC120567843 ptchd3,LOC103354362 coding upstream 64948 13640522 ~ 13644542 (-)
LOC120567845 ptchd3 coding upstream 67786 13643360 ~ 13645194 (-)
LOC120567847 LOC102799957,LOC102205731,LOC101468926,LOC102313119 coding upstream 75694 13651268 ~ 13659457 (-)
LOC120567848 LOC102214260,LOC102313714,LOC100696384 coding upstream 85964 13661538 ~ 13687808 (-)
G114247 anxa13,LOC105930306,LOC100703370 non-coding downstream 4546 13556604 ~ 13564803 (-)
LOC120568710 NA non-coding downstream 19883 13533138 ~ 13549466 (-)
G114215 LOC103354350,LOC100704451,LOC101473770,LOC106904511,LOC103151571,LOC106963118 non-coding downstream 162519 13394461 ~ 13406830 (-)
G114202 NA non-coding downstream 280356 13288182 ~ 13288993 (-)
G114199 NA non-coding downstream 282129 13286651 ~ 13287220 (-)
G114256 LOC102077222,LOC102776852 non-coding upstream 47329 13622903 ~ 13625479 (-)
G114257 NA non-coding upstream 50202 13625776 ~ 13628667 (-)
LOC120567953 NA non-coding upstream 366481 13942055 ~ 13948115 (-)
G114456 c8a non-coding upstream 473920 14049494 ~ 14055523 (-)
LOC120568036 NA non-coding upstream 549129 14124703 ~ 14171474 (-)
dis3l2 dis3l2 other downstream 87124 13469531 ~ 13482225 (-)
G114152 NA other downstream 480786 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 594021 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 800724 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 960780 12601180 ~ 12608569 (-)
tfr1a NA other upstream 374297 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1038039 14613613 ~ 14618224 (-)
G114680 NA other upstream 1220344 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 1714508 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 2568586 16144160 ~ 16148121 (-)

Expression


Co-expression Network