LOC120568315


Basic Information

Item Value
gene id LOC120568315
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13578232 ~ 13592369 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815733.1
CCTGAGCATTTTAGCACCTACACTTTATGAGGCTCCCATTGtgtgaaagagacagaaaagATGGACGACATAGATGCCATGTTCAGTCACCTGCTTGGAGAGATGGATCATCTCTCTCAGAGTTTAATGCCTGCAGCGGACACCGCAGAAGTGGACCCTGACACGCAGGCAGAGAGAACCTTCTCCATTGGCTTCACAGACCTAAATGAGTCTCTTAATGAACTGGAGGACCACGACCTGGATGCTCTAGTGGCTGACCTTGAATCAAAATCAACCCCTTCAGAAGAGAGACTCCTCACAGATCAACAGACCAACATCCGTACAGAAAATCAAATAGCAGCGTCAGCCTTGACTCAGGAACCTGAGCCAGCAGCTGCTATTCCTCCACAATTGAACTCTGTTGAATCCTCTGGAGGGCTGCAGATGAGCGAACCCCAGACAAAGGCAGACAAAATCAAACTGGCTCTGGAGAAACTGAGAGAAGCCAAAGTGAGGAAGTTGATCGTGAAGGTGCTGATGAGTGACGGCAGCTCCAAGACACTGATGGTGGATGAGAGACAGACGGTCCGAGAGGTTTTGGACCAGCTTTTCGAGAAGACACACTGTGACTGCAGCATCGACTGGAGCCTGTGTGAGACCAACCCTGAGCTGCAGATTGAAAGAGGCTTTGAGGACCACGAACACTTAGTGGAGCCCCTGTCTGCATGGACTCGCCTCAGTGAAAACAAAATCTATTTTGTGTCGAGACCTCAGAAGTATGTGATGTTTACAGAGCCTCAAGTATTTTACATgtggaaaaagaagaaagaatgtATGAGTGGGATTAACGAGCAAGCCAAACAGATCTTACTCAAGGAGCATTTCGGAGGTTCCACTTTGATTGTTCCTGATCTTCAGGGCATGCTGTACCTAAAGGAAGATGGGAAAAAACTTTGGAAACCTCGCTACTTTGTGCTCAGAGCCTCGGGCATCTACTATGTACCTAAGGGAAAGACAAAGTCCTCCAGTGATCTCGCCTGCTTTGTTCACTTTGAAAAAGTCAACATCTACACCACCAACAACTTCAAACAGAAATACAGAGCGCCCTCTGACTTCTGCTTCATGCTAAAGCATCCCTGCATCCAGAAAGAGTCGCACTACGTCAAGTTCCTGTGCTGCGACGATGAGCACACACTGTTGCTTTGGGTCAACTCCATCAGAATAGCCAAGTATGGGACTGTCCTGTATGAGAACTACCAGGCCGCAATAAAGAGAACCTCCACTTTACAAACTCTCCACTTTGATGCACACAAAGGCAAATATAACAGTCACGCCCCTCAGATCAGGCCACAGCCGAGTCCAGCTCcacccaaaaccacaaatgttgAAGACTATCCACATGAGCCACCACCTGACttcatccctcctcctcctcctggacacacacatgtttgAGACACATCGTCGCATCCTTCAGCTAGCCTGAATTGAGCCAATTTAGCCTCCTGTGTGCACACACATCAAACCTGGAGCCAATAATATGTTTCAGTAATGCACACACGTAGTAGTAAAGTAGAAACAAGTAGTGTTGCATGCCCATGatgcaaaataataaaaaaatgtaagattattttttggggcatttttaggcctttattgacaggacagctgaaga

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process

KEGG:

id description
K23488 RAPH1; Ras-associated and pleckstrin homology domains-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815733.1 True 1654 mRNA 0.47 13 13578232 13592369

Neighbor

gene id symbol gene type direction distance location
anxa13l anxa13,LOC100703370 coding upstream 11765 13555585 ~ 13566467 (+)
LOC120568709 LOC103354345,LOC100697448 coding upstream 23572 13487461 ~ 13554660 (+)
LOC120568788 gorasp2,LOC103354349,LOC101074307,LOC105930246,LOC106513812 coding upstream 157267 13411953 ~ 13420965 (+)
LOC120568628 LOC103354350,LOC103478943,LOC107086843,LOC100704451,LOC101473770 coding upstream 167777 13394488 ~ 13410455 (+)
LOC120567765 NA coding upstream 185629 13389221 ~ 13392603 (+)
LOC120568344 LOC103354340 coding downstream 28191 13620560 ~ 13629924 (+)
yme1l1b LOC103354339,LOC104952441 coding downstream 37889 13630258 ~ 13640164 (+)
LOC120567846 LOC103354336,LOC103398841,LOC101469236,LOC104930847,LOC100702297 coding downstream 52860 13645229 ~ 13649796 (+)
LOC120567849 LOC104930846,LOC103354334,LOC100696120 coding downstream 96052 13688421 ~ 13700883 (+)
rgs11 rgs11 coding downstream 392930 13985299 ~ 13993598 (+)
G114095 NA non-coding upstream 104981 13473014 ~ 13473251 (+)
G114094 NA non-coding upstream 105875 13469511 ~ 13472357 (+)
G114063 NA non-coding upstream 222182 13354254 ~ 13356050 (+)
G114032 NA non-coding upstream 289229 13288193 ~ 13289003 (+)
G114055 NA non-coding upstream 291013 13286650 ~ 13287219 (+)
G114271 NA non-coding downstream 66673 13659042 ~ 13659381 (+)
G114301 NA non-coding downstream 140313 13732682 ~ 13732963 (+)
LOC120567951 NA non-coding downstream 150906 13743275 ~ 13840945 (+)
G114350 NA non-coding downstream 378696 13971065 ~ 13971281 (+)
G114371 NA non-coding downstream 446313 14038682 ~ 14040236 (+)
si:ch73-71c20.5 NA other upstream 391868 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 452769 13123030 ~ 13125463 (+)
rpl37a rpl37a,RPL37A other upstream 460876 13114596 ~ 13117356 (+)
col6a1 col6a1 other upstream 503638 13010575 ~ 13074594 (+)
LOC120569010 NA other upstream 617883 12952548 ~ 12960349 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other downstream 694781 14287150 ~ 14295993 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 1393408 14985777 ~ 14993083 (+)
ro60 trove2 other downstream 1421374 15013743 ~ 15026208 (+)
G114789 NA other downstream 1559427 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 1746188 15338557 ~ 15368780 (+)

Expression


Co-expression Network