gorasp1a (gorasp1,LOC103360281,LOC104945829)


Basic Information

Item Value
gene id gorasp1a
gene name gorasp1,LOC103360281,LOC104945829
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 12961268 ~ 12966562 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815777.1
CAGCGATGTTCGATTGTTTTGGACTGCAAACAAGATGGCCGTTGACTGTCAACCGTAATAATTCTCAGACAGTTGTTATTTTCTGATATCAGCTAATATTTGAAAGTTCCTGACAGAAATGGGTTTATCACAGAGTTCAGAAGTATCCGAAGGAGGAACCTATGGATACCATGTGCACGGCGTGCAGCCGAATTCCCCTGCAGAAATGGCCGGACTGCAGCCCTTCTTTGACTTCATTCTGTCGCTGGACAACAAAAGACTTAATGAGGAAAATGACCTGCTGAAGGAGCTTCTGAAAGCCAACATGGAGAGAGCAGTGAGGATGGAGGTGTACAGCACTAAAACCACAAGGGTCCGTGAGCTGGAGGTGGTGCCCAGTACCATGTGGGGAGGACAGGGCCTGCTAGGTGCCAGTGTTCGCTTCTGCAGCTACCAAGGAGCCAATGAGAATGTCTGGCACATTCTGGATGTGGAACCCAGTTCACCTGCTGCATTGGCAGAGCTTCAGCCACACAGTGACTACATTGTTGGAGCAGATCAAGTGTTGCAAGATTCAGAAGACTTCTTCTCGCTGATTGAGGCCCATGAAGGGAAGCCCCTGAAGCTGATGGTGTACAACACACAAACGGACGCCTGCAGAGAGGTGGTGGTCACACCAAATGGAGCGTGGGGCGGAGATGGCAGTTTGGGTTGTGGCATTGGTTATGGCTACTTGCACCGAATCCCAGCGCATCCTGATGTATCGACGGCAAAGCCTCCCAATCTGGTTCCCGAGGATAAACCCTCCCCAGAGCTGCCTACCCATGGATTCATGGAGGCACCATTGGTGGCACCTTCGAGTCAAAGTGAAGATGCGTTAGACCTGGAGCAGGTCACCCTCCAGGAAGCTCCTCTACCTCCACCCGTCCGGAGGGTCATGGACCCTGGTTTCTCAGACTCTGAAGGGGCAGTGGTGAACCCTGACCCTGCAGATTTGGCGGACAGACTGGATCTGTCCATGTCGTCCATCGACATGACCAACACTGCACTGGCTATGAACGAGGAGAAGGACGGGGAAATCTCTGGTGTTGAGGAGCTAGAGGACAGTGTTCTACTTTCGTCGTCAGCAGACAGCCAGACTGAGCCACAAGAGCTGAGCTCCCAGGCAGCCATGGACCTCACCTCTGCTCTCGCTTCCACTGACACTTTGTCTGATTCAGGCGTCACAACCGCTGAACCATCTCACCTGGTTACAGACCTACCTGGCTCTCTGTGTGAATCTAGCGATAGCCTGAGTTCCCCTATGCGTGAATTGTCTCTTCCCGTAGAGTCCCTAGAGTCTCCTGCTGAGCCCTCTGTCCCAGCTGAAGTCCCTCCCTGCCCGTCTCCTGTCGATCTCCTCCAGTCCTCTGCTGTCGATGAGCCAATGGCAGCCGATTCTCCTGCTCAGGCCATCGAGGATGCAGCAGGGCCAGCGGAGGAGCCTGCAGAGCCTCTAGATATGGCTCCCGCTCACCACTGCAGCCACGAGAGCGATGGGAACGAACCAGAAGAAGAGCCGCCTCTTGAGTAAGCTTGTATCAGGCCGTACAAAAATGCAAAGTGAAGTTGACAATCactggggctttttttttttaaagaaacactATAGGAACTACAGGACAGACACTAATAGTCTTACAAAAAGCATATGGCTCCTTCATCAGTTTAGTTACACTACAGAATCCAGGTAAAGCATTAGCATATAAGTAGAAAAATACTAAGACACTGTAGGACCAtcctatttgttttaaatgtgtgggAATTGAAAGTTACTGCTAATTTGTACACCAAGGTTATAATGTCATCAACATTTTTCCATGCCTGGTGCAAAATTAGATTATACGGGTGACAAGACTTTGCTTCTAGTACACTAATGTGATAAATACTTGAACACTTccaaagacaaacacatacatttacTACAGCAAAGCTCAGCTGCACCTTAATATCCACTACCCTAAGTTTTTGAAGCTACCAGACTGTTGGCAGTTCATATCAGTCGTCATAGTCTTGAGGTGCAGTGCTGCATCTGTTGTCTACGTGTTTCAAAGAACAAATGATtcccaaaatagaacttttaaAAATAACTTGCATATAGGATTATGAGAaggacatttttacagtagttTATGGCCAATGTATTGGATTTTTAAGTGTTGGTATGAGGAAATATTTGTGCATTTGTGCTGCGTGAAACCAGTCCAGTACAGGTTTTTACCCCAAATTTGATGAGGTCAATATGTTTTACACATCATCTTTTAAGCCGGGTTTCGACACAAGGATCTGGGGTCTTTTAAAGTCCCTCACCTCGAGAATAAAACAATAAGTGCCTGTCTCTACTAGATCATCTGTTGAGTCATggttatttatttgtgctttagaaagCAACCGCTGTAAAGCAAGCAATCAGCAAATATTTTGTATTTCACAGCTCCGttcttttgctctctctctcaccttcgCTCACTCGAGACGTAGCCAGCGTCTCTGCAGCCAATGCAGTTCAGTGTGGCGCTGGCAGCAAAGCCTAAATTTACTTTTAATGttatcaaacaaagagaaatgctCTCTCCTCTgtactttcttctttttatcaGTGAGTTGAAGCAGCAATGCGGTGTGTGTTTGACCAGTCAGCGATGGTCATCCATGCAAACCCTACCCCGAAGGTTCCTGTACTTTCAGAAAGTAGTTCCTACTGATCAGGGACTTTTTGGGGGGTAAAAAGGCTCAGAAAAATGTCACAGATCTAAATGTAGATCCTGGTCCCTGAGGTCGAGCGCAAAGAGTTCCTCGGATGATCCCTAGTTCTGGGGGAAAAATTCCTGTGGTCGAAACTCggctttttatttgatttattcagCCACGCAATGTTTGAAAACAATTTTTACTGTTTGTATCGATGGAATTATGTCCCCCATGTTTAATTCAACACTATATTTACTTTGTAATCTATGCAACAATAGACAAGTACTGCCTGTGGGTAGACAGGTAAGGTTTAAAGCCAATAGATatgtcatatacagtatgtgagaaGTCTGGTCAGAGTGATGCTGCTGTTGAGTAATTGTTTTCCAACTTTCTACGGGGCTTCTTAAAGTTTTTCACTGTCAAAGTAGGTGCAAGTGTGTAAAATAAGGTATAGTATTTTTGCAGATATTTTATCAATTGTACGTTTTATTAGGAATGAGTGCAGTATTTGTTGATGAATGTGAAATGGGTGAATCTTTGATGGTTAAACAATCATATCACTTGA

Function

symbol description
gorasp1 Predicted to enable metal ion binding activity. Involved in establishment of protein localization to plasma membrane and negative regulation of dendrite morphogenesis. Located in Golgi apparatus.

NR:

description
Golgi reassembly-stacking protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815777.1 True 3277 mRNA 0.46 9 12961268 12966562

Neighbor

gene id symbol gene type direction distance location
oxsr1a LOC104927954,LOC103360287,LOC100697833,LOC102210831,LOC102290626 coding upstream 59843 12888543 ~ 12901425 (+)
ctdsplb LOC103360289,LOC102790982 coding upstream 92126 12855102 ~ 12869142 (+)
LOC120567759 vipr1,LOC106517907,LOC107384262 coding upstream 124286 12813318 ~ 12836982 (+)
eif2b5 eif2b5 coding upstream 160198 12795403 ~ 12801070 (+)
LOC120568999 LOC104956575,LOC101467645 coding upstream 166494 12789847 ~ 12794774 (+)
LOC120567919 LOC104962026,LOC103362208,LOC102293788,LOC102208917,LOC101474809 coding downstream 12531 12979093 ~ 13025931 (+)
LOC120567922 NA coding downstream 66877 13033439 ~ 13037812 (+)
LOC120567921 LOC103362241,LOC104934209,LOC101483427 coding downstream 72328 13038890 ~ 13045691 (+)
col6a2 col6a2 coding downstream 115181 13081743 ~ 13096416 (+)
zgc:162816 LOC103362211,LOC102298354,LOC107097021 coding downstream 134840 13101402 ~ 13105801 (+)
G113956 NA non-coding upstream 86958 12861625 ~ 12874310 (+)
G113938 NA non-coding upstream 181870 12778340 ~ 12779398 (+)
G113852 NA non-coding upstream 333749 12626079 ~ 12627519 (+)
G113843 LOC104931181,LOC104949953,LOC107384241,LOC103360313 non-coding upstream 358346 12601183 ~ 12602922 (+)
G113811 NA non-coding upstream 604547 12356340 ~ 12356721 (+)
G114000 NA non-coding downstream 60517 13027079 ~ 13028170 (+)
G114008 LOC104953400 non-coding downstream 185537 13152099 ~ 13153594 (+)
G114033 NA non-coding downstream 229699 13196261 ~ 13198734 (+)
G114035 NA non-coding downstream 233206 13199768 ~ 13200746 (+)
G114037 NA non-coding downstream 238263 13204825 ~ 13207023 (+)
LOC120569010 NA other upstream 919 12952548 ~ 12960349 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other upstream 42070 12911439 ~ 12919198 (+)
LOC120568152 LOC104963178 other upstream 54025 12901539 ~ 12907243 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other upstream 361428 12582642 ~ 12599840 (+)
LOC120568189 nop9 other upstream 794991 12157449 ~ 12166277 (+)
col6a1 col6a1 other downstream 44013 13010575 ~ 13074594 (+)
rpl37a rpl37a,RPL37A other downstream 148034 13114596 ~ 13117356 (+)
ndufb3 ndufb3 other downstream 156468 13123030 ~ 13125463 (+)
si:ch73-71c20.5 NA other downstream 216722 13183284 ~ 13186364 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other downstream 1320588 14287150 ~ 14295993 (+)

Expression


Co-expression Network