acss2l (LOC100697261)


Basic Information

Item Value
gene id acss2l
gene name LOC100697261
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16541130 ~ 16562163 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815831.1
CAGCAAAATATGCAAGCTTCGTTCTCATTGGTCGAGGAGAGTCACGTGACCGCCTGAGCCCCACCGAGCTTATAAGGTCTCCGTCTGCTGGACAGACTGTAGATGGaCCACACATCACCCTTCCTGTCAGTGTCAAATCAAACCTCCTGGTGCCTGCATGAATCCCCAGCATTCATCTGGTACTGCACACTTTCTCCACCTCCTTGCTTGGGAAAATAATGCGATCAACAGGCCAGGGAGGGCTCACCCAATGAAAAAGTGGGAGTGCCGAACCCTGCTAGTCGATTGGCTGCCCTGGCCCTAAGAAGACCTGCAGCTCAGGGATTAGAGATTTCATAGGCCTGTCTGCATCTGTCCTTTCACAATGGTTGTTACTGAATCCCAGGACAAAATGTACTACCCTCCTGATGACCTAAAGAGGGATGCTCATGTGCCTGATTTTAACTCCTATCTGGCACTGTACAGGAAGTCTCTTGAGAATCCAGAAGCTTTTTGGAAGGAGGTTGCTGATGACTTATTTTGGAAGAAGCCAGCAACAGGACCAATGCTGCAGTACAACTTTGATGTGACAATAGGGAACATTTATGTCAAATGCATGGAAGGGGCTAAAACCAACATGTGCTATAATGTCCTGGACAGGCTTGTGAAGGAGAGGAATCTTGGTGAAAAGGTTGCCTATTACTGGGAGGGGAACTCACCTGACCACCACATGGCCATCACTTACAGCCAGCTGCTGAGCCAGGTCTGCCGCTGTGCTAATGTCCTCAAGAAAATGGGTgtaaaaaaaggagacagggtGTCTATTTACCTTCCCATGATCCCAGAGCTGGTTTACACTATGTTGGCCTGTGCAAGGATAGGCGCTGTTCACTCCATTGTGTTTGCAGGCTTCTCCTCTGAGTCTCTGTGTGAGAGGATCATGGATGCCCAGAGCAGTGTTCTGGTGACAGCAGATGGTGTTTATAGAGGAGAGAAGCTGATCAACCTGAAACAGATTGCGGACGAGGCTCTGGAGAAGTGCAGGGAAATagCGTCACCTAGTGTCACTAAATGCCTCATCATCGAGCATCATGCACTCAGGATAAAAAGTGGAGCTGCATGCAACAAACTACAGACCCCCTGGGACTCAGAATGTGATGTGTGGTGGGAGGAGGCGATGAGAGACTCTCCTGAAGAGTGTGAACCTGAGTGGCTGGATGCTGAGGACCCGCTGTTTATCCTCTACACCAGCGGCTCCACTGGCAAACCCAAGGGTGTTCTCCACACTGTTGCCGGGTATCTGCTCTACACGTCGCTGACCTTCAAGTATGTTTTTGACCATCACCATGACGATGTGTACTGGTGCACCGCCGATATCGGCTGGATCACCGGCCACTCCTACATCACCTACGGCCCCCTTGCGAATGGCGCCACAAGTGTCCTATTTGAAGGTATTCCAGTTCACCCTCATGTTGGCCGGTTCTGGGAGATCATTGAGAAGTACAAAGTGACCAAGTTCTACACAGCTCCGACAGCCATCCGCCTGCTGATGAAGTACGGACGGGAACCGCTGCAGAAGTATGACCTCTCCAGCCTGAGGATTCTGGGTACTGTTGGTGAGCCGATCAACCCAGAGGCGTGGCAGTGGTACCACGAGGCCGTCGGTAAGGGCAGATGTCCCGTGGTCGACACTTTCTGGCAGACAGAGACCGGAGGTCATGTTTTgactcctctgcctgctgccaCGCCACTGAAACCAGGCTCTGCTACCTTTCCTTTCTTCGGGGTAGAGCCCACAATCCTCAACGAACACGGAGAGGAACTGGAAGGCGAGGCTGAGGGTTATCTTGTATTCAGGAGGCCCTGGCCTGGAATAATGCGCACTGTGTACAGAAACCATGAACGCTTCGAGAACACCTATTTCAAGAAGTTCCCAGGCTTCTATGTAACTGGTGATGGCTGCAGGCGGGATAAAGACGGCTATTACTGGATCACAGGAAGAATAGACGACATGCTGAATGTGTCAGGCCACCTGATGAGCACAGCGGAGGTGGAAGCGGCTCTGACGGAGCACCCGGCTGTGGCGGAGGCTGCGGTGGTGAGTCGGCCTCACAAGGTGAAGGGCGAGTGTCTGTACTGCTTCGTCAGCCTCAAAGACAGCAGGGAGTTTACCCACACACTGGTGGAGGAGCTCAAGAGACTGGTGAGAGAGAAAATCGGACCAATCGCCACGCCAGACTTCATTCAAAATGCTCCAGCGCTGCCGAAGACTCGCTCAGGGAAGATCATGAGGCGAATCCTCCGGCAGATCGCACGCAATGAGAAGGACCTGGGTGACCTTTCGACTCTGGCCGACCCGAAGGTGGTGGAGGAGCTGTTCAGCCAGAGATGTGAAGCTGCAGCCTGAACaaatctctcgctctctctctcgctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcatgcaaCAGTACacatgaaaacatttacaaactgCTGGTTTCAGATCAGCAAGTGCACTTTTGGGATTCAATGAAGGGGCTGGGATCAGAAATGTATACCACTGACACTGAGACATTTAAAGTGTTgttttatgtgaaaaaaagaaaaaagtagttTCTTTAATTTAGTTGTTGCTTTGCATTTGGGCCAAGATGTCAAACAAACTAGACACACTATTACTAACTTTTATATTTTCATAAAAGTCTTTTCATGTCTCATATCGTTGTAAGAGGAAGTtaatcttttctctctttttaaatctttaaataaaatagTCAGCTTTGCACACAG
>XM_039815832.1
TTAACTCTTTGTTTTATCGATGCTaCCACACATCACCCTTCCTGTCAGTGTCAAATCAAACCTCCTGGTGCCTGCATGAATCCCCAGCATTCATCTGGTACTGCACACTTTCTCCACCTCCTTGCTTGGGAAAATAATGCGATCAACAGGCCAGGGAGGGCTCACCCAATGAAAAAGTGGGAGTGCCGAACCCTGCTAGTCGATTGGCTGCCCTGGCCCTAAGAAGACCTGCAGCTCAGGGATTAGAGATTTCATAGGCCTGTCTGCATCTGTCCTTTCACAATGGTTGTTACTGAATCCCAGGACAAAATGTACTACCCTCCTGATGACCTAAAGAGGGATGCTCATGTGCCTGATTTTAACTCCTATCTGGCACTGTACAGGAAGTCTCTTGAGAATCCAGAAGCTTTTTGGAAGGAGGTTGCTGATGACTTATTTTGGAAGAAGCCAGCAACAGGACCAATGCTGCAGTACAACTTTGATGTGACAATAGGGAACATTTATGTCAAATGCATGGAAGGGGCTAAAACCAACATGTGCTATAATGTCCTGGACAGGCTTGTGAAGGAGAGGAATCTTGGTGAAAAGGTTGCCTATTACTGGGAGGGGAACTCACCTGACCACCACATGGCCATCACTTACAGCCAGCTGCTGAGCCAGGTCTGCCGCTGTGCTAATGTCCTCAAGAAAATGGGTgtaaaaaaaggagacagggtGTCTATTTACCTTCCCATGATCCCAGAGCTGGTTTACACTATGTTGGCCTGTGCAAGGATAGGCGCTGTTCACTCCATTGTGTTTGCAGGCTTCTCCTCTGAGTCTCTGTGTGAGAGGATCATGGATGCCCAGAGCAGTGTTCTGGTGACAGCAGATGGTGTTTATAGAGGAGAGAAGCTGATCAACCTGAAACAGATTGCGGACGAGGCTCTGGAGAAGTGCAGGGAAATagCGTCACCTAGTGTCACTAAATGCCTCATCATCGAGCATCATGCACTCAGGATAAAAAGTGGAGCTGCATGCAACAAACTACAGACCCCCTGGGACTCAGAATGTGATGTGTGGTGGGAGGAGGCGATGAGAGACTCTCCTGAAGAGTGTGAACCTGAGTGGCTGGATGCTGAGGACCCGCTGTTTATCCTCTACACCAGCGGCTCCACTGGCAAACCCAAGGGTGTTCTCCACACTGTTGCCGGGTATCTGCTCTACACGTCGCTGACCTTCAAGTATGTTTTTGACCATCACCATGACGATGTGTACTGGTGCACCGCCGATATCGGCTGGATCACCGGCCACTCCTACATCACCTACGGCCCCCTTGCGAATGGCGCCACAAGTGTCCTATTTGAAGGTATTCCAGTTCACCCTCATGTTGGCCGGTTCTGGGAGATCATTGAGAAGTACAAAGTGACCAAGTTCTACACAGCTCCGACAGCCATCCGCCTGCTGATGAAGTACGGACGGGAACCGCTGCAGAAGTATGACCTCTCCAGCCTGAGGATTCTGGGTACTGTTGGTGAGCCGATCAACCCAGAGGCGTGGCAGTGGTACCACGAGGCCGTCGGTAAGGGCAGATGTCCCGTGGTCGACACTTTCTGGCAGACAGAGACCGGAGGTCATGTTTTgactcctctgcctgctgccaCGCCACTGAAACCAGGCTCTGCTACCTTTCCTTTCTTCGGGGTAGAGCCCACAATCCTCAACGAACACGGAGAGGAACTGGAAGGCGAGGCTGAGGGTTATCTTGTATTCAGGAGGCCCTGGCCTGGAATAATGCGCACTGTGTACAGAAACCATGAACGCTTCGAGAACACCTATTTCAAGAAGTTCCCAGGCTTCTATGTAACTGGTGATGGCTGCAGGCGGGATAAAGACGGCTATTACTGGATCACAGGAAGAATAGACGACATGCTGAATGTGTCAGGCCACCTGATGAGCACAGCGGAGGTGGAAGCGGCTCTGACGGAGCACCCGGCTGTGGCGGAGGCTGCGGTGGTGAGTCGGCCTCACAAGGTGAAGGGCGAGTGTCTGTACTGCTTCGTCAGCCTCAAAGACAGCAGGGAGTTTACCCACACACTGGTGGAGGAGCTCAAGAGACTGGTGAGAGAGAAAATCGGACCAATCGCCACGCCAGACTTCATTCAAAATGCTCCAGCGCTGCCGAAGACTCGCTCAGGGAAGATCATGAGGCGAATCCTCCGGCAGATCGCACGCAATGAGAAGGACCTGGGTGACCTTTCGACTCTGGCCGACCCGAAGGTGGTGGAGGAGCTGTTCAGCCAGAGATGTGAAGCTGCAGCCTGAACaaatctctcgctctctctctcgctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcatgcaaCAGTACacatgaaaacatttacaaactgCTGGTTTCAGATCAGCAAGTGCACTTTTGGGATTCAATGAAGGGGCTGGGATCAGAAATGTATACCACTGACACTGAGACATTTAAAGTGTTgttttatgtgaaaaaaagaaaaaagtagttTCTTTAATTTAGTTGTTGCTTTGCATTTGGGCCAAGATGTCAAACAAACTAGACACACTATTACTAACTTTTATATTTTCATAAAAGTCTTTTCATGTCTCATATCGTTGTAAGAGGAAGTtaatcttttctctctttttaaatctttaaataaaatagTCAGCTTTGCACACAG

Function

NR:

description
acetyl-coenzyme A synthetase, cytoplasmic-like

GO: NA

KEGG:

id description
K01895 ACSS1_2, acs; acetyl-CoA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815831.1 True 2802 mRNA 0.50 20 16541130 16562163
XM_039815832.1 False 2720 mRNA 0.50 20 16541130 16562040

Neighbor

gene id symbol gene type direction distance location
napgb napg,LOC102781071 coding downstream 104889 16430142 ~ 16436241 (-)
LOC120568161 LOC104950912 coding downstream 298433 16227938 ~ 16242697 (-)
LOC120567616 LOC103355753,LOC107095425,LOC101067060,LOC108232884 coding downstream 332153 16202077 ~ 16208977 (-)
txndc12 txndc12 coding downstream 397444 16137864 ~ 16143686 (-)
slc25a24l LOC105932242,LOC107095427,LOC104957513,LOC102785394,LOC101478509 coding downstream 429694 16104772 ~ 16111436 (-)
LOC120568912 apcdd1,LOC102777074 coding upstream 123317 16685480 ~ 16712264 (-)
LOC120568957 LOC103353943 coding upstream 189830 16751993 ~ 16754766 (-)
LOC120567917 tmem200c,LOC104967041 coding upstream 252529 16814692 ~ 16820034 (-)
LOC120568369 ptprm,LOC102799796 coding upstream 285647 16847810 ~ 17015626 (-)
LOC120567671 lrrc30,LOC104932041,LOC103353948 coding upstream 458572 17020735 ~ 17022393 (-)
G115278 mtcl1 non-coding downstream 28235 16508577 ~ 16512895 (-)
G115240 NA non-coding downstream 224158 16316651 ~ 16316972 (-)
G115200 NA non-coding downstream 295237 16243792 ~ 16245893 (-)
G115192 NA non-coding downstream 318696 16221788 ~ 16222434 (-)
G115191 NA non-coding downstream 321020 16219894 ~ 16220110 (-)
G115323 NA non-coding upstream 50865 16613028 ~ 16614925 (-)
G115331 NA non-coding upstream 188737 16750900 ~ 16751275 (-)
LOC120569046 NA non-coding upstream 261139 16823302 ~ 16824660 (-)
G115391 NA non-coding upstream 474703 17036866 ~ 17039107 (-)
G115428 LOC103353952,LOC107089435 non-coding upstream 550553 17112716 ~ 17114744 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other downstream 205174 16330952 ~ 16335956 (-)
mppe1 mppe1,LOC102781954 other downstream 213704 16317418 ~ 16327426 (-)
cc2d1b cc2d1b other downstream 339432 16182654 ~ 16201698 (-)
G115164 btf3l4 other downstream 393009 16144160 ~ 16148121 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other downstream 1236520 15290082 ~ 15304610 (-)
G115312 ralbp1,LOC102778314 other upstream 74945 16637108 ~ 16639812 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other upstream 194168 16756331 ~ 16811918 (-)
ly97.3 NA other upstream 477637 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other upstream 480963 17043126 ~ 17045062 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 1490821 18052984 ~ 18058159 (-)

Expression


Co-expression Network