ndufv2 (ndufv2)


Basic Information

Item Value
gene id ndufv2
gene name ndufv2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16553745 ~ 16560428 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815833.1
TCACGTCAGACCCTCTCAATCGAGCGTCAAAACACTTGTGTTGATGTCGGACGCAGCTGTTGTCCTGTCCATTTGCTAACACATCAAACTTTAAGCCCCAAGATGTTTTTGTCTGCTGCAGTCCGCTCTGCAGTATCGCAGACGGTCAGGAGTCTGCATCGTTCTGCTGCACGCGCTGGAGCTGGTGGAATCTTTGTTCACAGAGATACTCCTGACAACAACTCAGATACTCCTTTTGACTTCACTgaggaaaacaaaaagAGGATTGAGGCTATCATTTCAATGTACCCTGTTGGACATAAGCAAGCAGCCACCATCCCAGTGTTGGATTTAGCCCAGAGGCAACATGGATGGCTCCCTATCTCCGCCATGAACAAGgTCGCTGAGGTGCTAGAAATTGCTCCAATGAGAGTGTATGAAGTAGCAACATTCTATACGATGTTCCTGCGTCAGCCTGTGGGAAAATACTTCATTCAGATCTGCACAACAACACCCTGCATGCTTTGCAACTCAGACAGCATCCTGGAGGCCATCCAAAACAAACTGGGTATCAAGGTTGGAGAGACTACTCCAGACAAGATGTTCACGCTAATAGAAGTGGAATGCCTAGGTGCCTGTGTAAATGCTCCAATGGTCCAGATCAACGACAACTATTATGAGGACCTCTCACCTAAGGACATTGAGGACATTATTGATGAACTTAAAGCAGGCAGAATCCCACCACCTGGGCCTAGGAACGGCCGTTTCTCCTGTGAGCCTGCAGGCGGATTGACTTCTCTGACAGAGCCTCCTAAAGGACCAGGCTTCGGTGTAAGACCGGACCTGTAGGCATTTTTGGGCCACCATCTGCTTTTATCAAAAGCCACTTGTCCCTGAAGCTGACATTATGCTTaatgttgtgtaaataaaatgttcatATACCTGTG

Function

symbol description
ndufv2 Predicted to enable 2 iron, 2 sulfur cluster binding activity; metal ion binding activity; and oxidoreductase activity. Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone. Predicted to be part of mitochondrial respiratory chain complex I. Is expressed in several structures, including alar plate midbrain region; digestive system; optic tectum; optic vesicle; and retina. Human ortholog(s) of this gene implicated in Parkinson's disease and nuclear type mitochondrial complex I deficiency 7. Orthologous to human NDUFV2 (NADH:ubiquinone oxidoreductase core subunit V2).

NR:

description
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0051537 2 iron, 2 sulfur cluster binding molecular_function

KEGG:

id description
K03943 NDUFV2; NADH dehydrogenase (ubiquinone) flavoprotein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815833.1 True 926 mRNA 0.48 8 16553745 16560428

Neighbor

gene id symbol gene type direction distance location
rab12 rab12 coding upstream 107203 16437581 ~ 16446542 (+)
LOC120568416 piezo2 coding upstream 124349 16344648 ~ 16429396 (+)
LOC120568300 gnal,LOC106520735 coding upstream 239944 16252963 ~ 16313801 (+)
pak1ip1 pak1ip1 coding upstream 327653 16222043 ~ 16226092 (+)
zfyve9a NA coding upstream 372891 16151205 ~ 16180854 (+)
ankrd12 ankrd12,LOC102778611 coding downstream 1768 16562196 ~ 16609463 (+)
twsg1a twsg1 coding downstream 53146 16613574 ~ 16628872 (+)
ralbp1 ralbp1,LOC102778314 coding downstream 69252 16629680 ~ 16639812 (+)
rab31 rab31,LOC108232866,LOC107383545 coding downstream 80386 16640814 ~ 16649143 (+)
vapal vapa coding downstream 90739 16651167 ~ 16679372 (+)
G115223 NA non-coding upstream 122090 16430161 ~ 16431655 (+)
G115208 NA non-coding upstream 175226 16289237 ~ 16378519 (+)
G115207 NA non-coding upstream 284916 16262657 ~ 16268829 (+)
G115136 NA non-coding upstream 304098 16242987 ~ 16249647 (+)
G115128 NA non-coding upstream 321269 16231698 ~ 16232476 (+)
G115295 NA non-coding downstream 46275 16606703 ~ 16608542 (+)
G115350 LOC104967252 non-coding downstream 200007 16760435 ~ 16821676 (+)
G115404 NA non-coding downstream 597200 17157628 ~ 17158200 (+)
G115437 LOC101466820,LOC102797643,LOC103353954,LOC100700019 non-coding downstream 608145 17168573 ~ 17169818 (+)
G115442 LOC103353955 non-coding downstream 622724 17183152 ~ 17186653 (+)
LOC120568419 LOC102779359 other upstream 26063 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 325194 16226307 ~ 16228551 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other upstream 632214 15865586 ~ 15921531 (+)
st6galnac3 st6galnac3 other upstream 710651 15764683 ~ 15843094 (+)
slc35a3b LOC103357859,LOC104957008,LOC101481522,LOC102792347 other upstream 985251 15554471 ~ 15568494 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other downstream 49948 16610376 ~ 16612206 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other downstream 846069 17406497 ~ 17483553 (+)
LOC120567767 NA other downstream 1466852 18027280 ~ 18029895 (+)
G115729 NA other downstream 1744721 18305149 ~ 18354344 (+)
skila skil,LOC102782637 other downstream 2006205 18566633 ~ 18602263 (+)

Expression


Co-expression Network