ralbp1 (ralbp1,LOC102778314)


Basic Information

Item Value
gene id ralbp1
gene name ralbp1,LOC102778314
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16629680 ~ 16639812 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815836.1
AAGCGTTCGCTTTCGAACTACATTTCCTATCAAGCACTTCGGCTGTGGCGCAAGCGCAGATGGGTTTATTTAGTGTAGAGACAACCGGAAGCTCCACTCTGAAATTGACCGAACGGGATAGTTCTTGGTGTGATGGAGAGGTGATGTGCCAGTCAGAGGAGTGACAAGGCCAGAGCAGCCATGACTGAGTGCTTCCTGCCCCCCAGCAGCAGCCCTGCAGAGCAGCGCAGGGCTGAGCACCCAGGGGGCGTGGCCCGCACCCCCAGCTCTGAGGAGATCAGTCCCACCAAGTTTCCCGGCTTGTACCGCACCGGCGAACCGTCGCCGCCTCATGATGGCCATCACCACGAGGCACCTGACGCCTACGTCTCAGACGATGACAAAGAGCACagcaagaagaagaacaagttcaagaagaaggagaaaaggACGGAAGGCTACGCCGCTTTCCAGGAGGACAGTTCAGCAGACGAAGCAGAAAGCCCGTCCAAGATGAAGCGCTCCAAGGGGATCCATGTGTTCAAGAAGCCCAGCTTCTccaagaagaaggagaaggactTCAAGGTAAAGGAGAAGGGCCCCAAAGAGGACAAAGCTAAGGACAAGAAATCTAAGGACCTGACGGCTGCAGATGTGGTTAAACAatggaaggagaagaagaagaagaagaaaccgaCAACAGAGGCCGAGCCAGTCCCAGTGGAGATCCCCACCTTCAGGCCCATCTTTGGAGCACCTCTGACTGAAGCTGTCAAGAGGACGGCTCTGTATGATGGCATCCAGCTGCCAGCCGTCTTCAGAGAATGTTTGGACTACATTGAAAGTTATGGCATGAAGTGTGAAGGCATCTACCGGGTTTCAGGTATGAAGTCCAAAGTGGATGAATTGAAGGCAGCATATGACCGTGAGGAGTGCCCCTGCCTGGAGGAGTATGACCCCCACACGGTTGCCAGCCTACTGAAGCAGTACCTACGCGAGCTGCCAGATATCCTGTTGGGCCGAGATCTGGCCCAGCGCTTTGAGGACGCCTGCGGTCGGCAGGTGGAGGCGGAGAAGATGGCGGAGTTCCAGAGGCTGCTGACCGAGGTGACGCCGGAGAGCCGACTTCTTCTCTCCTGGCTTATCACGCACATGGACCACGTCATCGCCAGGGAGGCGGACACCAAgatgaatattcagaatatCTCCATCGTCCTTAACCCAACCATACAGATTGGGAATCGTGTTCTTTACATGTTCTTCACACACGTGAGGGAGCTGTTTGGAGACGTAGTCCTGAAGCCGGTGGTGCGGCCACTCCGCTGGTCCAACATGGCAACCATGCCGGCGCTGCCTGAGACCCAGGAGAACATCAAAGAGGAGATCCGACGACAGgaGTTCCTGCTGAACTGCCTGCACAGGGACCTGCAGGCAGGGGTGAAGGACTTATCTAAAGAAGAGCGGCTCTGGGAGGTTCAGAGAATCCTGACTGCGCTAAAACGCAAACTGAGGGAGGCCAAACGACAGGAGTGTGAGAGTAAGATAGCCCAGGAGATAGCAAGCCTCTCAAAGGAGGATGTTTCAAAAGAGGAAATGACTGAGAATGAAGAGGAAGTCATTAACCTCCTCTTAGCACAGGAAAATGAGATCCTAACAGAGCAGGAGGAGCTGATCTCTCTTGAGCAGGTGCTTCGTAGACAGATTGCTACTGAGAAGGAAGAAATCGAGAGACTGCGAGCAGAGATTGCAGACATACAGAGCGTTGTATTCCTCAGCCGGCAGCAGGGGCGCAGTGAGACAGAGGAATATTCGTCAGACAGTGAAAGTGAGAGTGAAGATGAGGAAGAGCTGCAGATGATTCTGGAAGACCTGCAGAAGCAAAATGAGGAACTGGAgAACAAAAATACCCACCTGAACCAGGCCATCCACGAGGAGCAGGAAGCCATCTTGGAGCTCCGCGTTCAGCTTCGCCTCCTGCACAGCCACAAACTGCAGCAGGAACTGACCGTCCAGCCGCCGGTGGAGCAGGCCCCGCCCACGCAGCCCAGCCCGGAGCCCCGCACCGAGGAGCAGACCAAATGTTTGGTTGCCGCGGTGGCTGCCGGTGCAGACGCCGCTGCCTCTGTCAATGGCAAGGCAGCTAAGGATCCTTCAAAGCCCTCACCGAACAAAGACAGGAGGGACACCAACATGTGAAATATCATCTCAGTGATGCGTTTGGTGGCTCGGTGCTGCCGTACGTCTCTACCGCTGGTCAGTTGTCCTGTAGCGTCACTTGTCATCCACTGGAGATTTCACTTTGCTGGATCCATGAGTTCGTTAGTAATTGTGTCCACCAAGTGGCAGCCATGGAAAAATCTGTTGTACTGTCTTTGGCGTCCTGACCCTTTTTTAGCAGGAATCAAAAACCTTGTTTCTCATTTTTCaatgcaaaacacaaaaaactagAAAAGCTGATGTAGTGGACAACTGGCTACTACTGTGAGAGACTAGGTGGACCATATTATCAAATCCACAGTGCCAAGCCTGTATGAAGGTAGAAGGGGGGGGGCGGGATTAAGGCATTCATAAAGCATGTAGGGGGAAGGaagagagtttaaaaaaaaaaaaaaaaaaaagtaaatgtcagGCACCTTGCCAGTTTGTGACATAAAGCTTATTTTTTTGCTGGTAAGGGCTCAAGTGATGAACGTAGACCAGATATATCCCTCATCTTAGGAAAGAGACCACTGTGCCATAACCGAAGATCCCAGACTGGACACATTTCCCCAGAGAACCACTAATACAAAAGCTCTTTGAATAATGAAGAATTTATGATTGGTCtatctatatattatatatttaagtagtATTCTGAAGAATACGGACGACTATTCAAGAAATACATTGATTGAAGTAACGGCTTTTTAGTAATATATAAATttatgtataaatataaatgtagaggctttcttttctttgaacAGCAGCTGCACGTAAACACAGTGGCGTTGTGCCTCGCAACTGACCAGTGGATGAAAACCTGAACGGCAAACAAATACGCAACAAAAGTATATTCATCACTGGATAATATAGATAGACAAACAGCTGGAGGCCACATTGTTACAGTCACACTTTGCTCTGTAGTGCAATCAtcttctctctgcttctcttgcACGAACAAGTAAACGtggaaaattacatttctgCAGTTTTATGATGGAACAACAAATCTGTAGCGATGATTATTGTCGCCAAAATGTGTGCCGAGACACGCAGGAGGcttatttagttttgttgtgtatttgatCGTGTTTTTTAACTCTTGATGTGTGGAGTTATATTTCATGGCATCAGTTgaaagtaagtaaaaaaaaaaaaaaaaaaaacttaaagatTACAAGtcaatcatttaatttcatCACTGATCCATGACTATTGCAAAGTACTGTCATCGCTCAGTGATATTTAAAGCAAAGGCATGGCCTGACTTACTTACCATTTGTGTATATCAATGTAAAATtgcaaacatactgtattttcagCTCCTATGTtttgtcacgttattttttttaaatattaataatgaCCTGTATGGAGTATGCTAGTGTAACTGCCCCAGCTTTGGTCACGGGCAAATCAAAGCAATCTCATCTGGACTCATGATTCAACATGTTATTAATCCTGTGACTGAAACAGATAAGTGCTAGATTGGGCTCAGAAGCTTCTCATGAGGTTATTTTCATATTGTTCCAAGCTTTTGTAGCTTATTGTTGCAGACAGAATAATGCTGTGAAGAATAAAGTGTTGATCTGAGTAACTTA
>XM_039815837.1
AAGCGTTCGCTTTCGAACTACATTTCCTATCAAGCACTTCGGCTGTGGCGCAAGCGCAGATGGGTTTATTTAGTGTAGAGACAACCGGAAGCTCCACTCTGAAATTGACCGAACGGGATAGTTCTTGGTGTGATGGAGAGGTGATGTGCCAGTCAGAGGAGTGACAAGGCCAGAGCAGCCATGACTGAGTGCTTCCTGCCCCCCAGCAGCAGCCCTGCAGAGCAGCGCAGGGCTGAGCACCCAGGGGGCGTGGCCCGCACCCCCAGCTCTGAGGAGATCAGTCCCACCAAGTTTCCCGGCTTGTACCGCACCGGCGAACCGTCGCCGCCTCATGATGGCCATCACCACGAGGCACCTGACGCCTACGTCTCAGACGATGACAAAGAGCACagcaagaagaagaacaagttcaagaagaaggagaaaaggACGGAAGGCTACGCCGCTTTCCAGGAGGACAGTTCAGCAGACGAAGCAGAAAGCCCGTCCAAGATGAAGCGCTCCAAGGGGATCCATGTGTTCAAGAAGCCCAGCTTCTccaagaagaaggagaaggactTCAAGGTAAAGGAGAAGGGCCCCAAAGAGGACAAAGCTAAGGACAAGAAATCTAAGGACCTGACGGCTGCAGATGTGGTTAAACAatggaaggagaagaagaagaagaagaaaccgaCAACAGAGGCCGAGCCAGTCCCAGTGGAGATCCCCACCTTCAGGCCCATCTTTGGAGCACCTCTGACTGAAGCTGTCAAGAGGACGGCTCTGTATGATGGCATCCAGCTGCCAGCCGTCTTCAGAGAATGTTTGGACTACATTGAAAGTTATGGCATGAAGTGTGAAGGCATCTACCGGGTTTCAGGTATGAAGTCCAAAGTGGATGAATTGAAGGCAGCATATGACCGTGAGGAGTGCCCCTGCCTGGAGGAGTATGACCCCCACACGGTTGCCAGCCTACTGAAGCAGTACCTACGCGAGCTGCCAGATATCCTGTTGGGCCGAGATCTGGCCCAGCGCTTTGAGGACGCCTGCGGTCGGCAGGTGGAGGCGGAGAAGATGGCGGAGTTCCAGAGGCTGCTGACCGAGGTGACGCCGGAGAGCCGACTTCTTCTCTCCTGGCTTATCACGCACATGGACCACGTCATCGCCAGGGAGGCGGACACCAAgatgaatattcagaatatCTCCATCGTCCTTAACCCAACCATACAGATTGGGAATCGTGTTCTTTACATGTTCTTCACACACGTGAGGGAGCTGTTTGGAGACGTAGTCCTGAAGCCGGTGGTGCGGCCACTCCGCTGGTCCAACATGGCAACCATGCCGGCGCTGCCTGAGACCCAGGAGAACATCAAAGAGGAGATCCGACGACAGgaGTTCCTGCTGAACTGCCTGCACAGGGACCTGCAGGCAGGGGTGAAGGACTTATCTAAAGAAGAGCGGCTCTGGGAGGTTCAGAGAATCCTGACTGCGCTAAAACGCAAACTGAGGGAGGCCAAACGACAGGAGTGTGAGAGTAAGATAGCCCAGGAGATAGCAAGCCTCTCAAAGGAGGATGTTTCAAAAGAGGAAATGACTGAGAATGAAGAGGAAGTCATTAACCTCCTCTTAGCACAGGAAAATGAGATCCTAACAGAGCAGGAGGAGCTGATCTCTCTTGAGCAGGTGCTTCGTAGACAGATTGCTACTGAGAAGGAAGAAATCGAGAGACTGCGAGCAGAGATTGCAGACATACAGAGCCGGCAGCAGGGGCGCAGTGAGACAGAGGAATATTCGTCAGACAGTGAAAGTGAGAGTGAAGATGAGGAAGAGCTGCAGATGATTCTGGAAGACCTGCAGAAGCAAAATGAGGAACTGGAgAACAAAAATACCCACCTGAACCAGGCCATCCACGAGGAGCAGGAAGCCATCTTGGAGCTCCGCGTTCAGCTTCGCCTCCTGCACAGCCACAAACTGCAGCAGGAACTGACCGTCCAGCCGCCGGTGGAGCAGGCCCCGCCCACGCAGCCCAGCCCGGAGCCCCGCACCGAGGAGCAGACCAAATGTTTGGTTGCCGCGGTGGCTGCCGGTGCAGACGCCGCTGCCTCTGTCAATGGCAAGGCAGCTAAGGATCCTTCAAAGCCCTCACCGAACAAAGACAGGAGGGACACCAACATGTGAAATATCATCTCAGTGATGCGTTTGGTGGCTCGGTGCTGCCGTACGTCTCTACCGCTGGTCAGTTGTCCTGTAGCGTCACTTGTCATCCACTGGAGATTTCACTTTGCTGGATCCATGAGTTCGTTAGTAATTGTGTCCACCAAGTGGCAGCCATGGAAAAATCTGTTGTACTGTCTTTGGCGTCCTGACCCTTTTTTAGCAGGAATCAAAAACCTTGTTTCTCATTTTTCaatgcaaaacacaaaaaactagAAAAGCTGATGTAGTGGACAACTGGCTACTACTGTGAGAGACTAGGTGGACCATATTATCAAATCCACAGTGCCAAGCCTGTATGAAGGTAGAAGGGGGGGGGCGGGATTAAGGCATTCATAAAGCATGTAGGGGGAAGGaagagagtttaaaaaaaaaaaaaaaaaaaagtaaatgtcagGCACCTTGCCAGTTTGTGACATAAAGCTTATTTTTTTGCTGGTAAGGGCTCAAGTGATGAACGTAGACCAGATATATCCCTCATCTTAGGAAAGAGACCACTGTGCCATAACCGAAGATCCCAGACTGGACACATTTCCCCAGAGAACCACTAATACAAAAGCTCTTTGAATAATGAAGAATTTATGATTGGTCtatctatatattatatatttaagtagtATTCTGAAGAATACGGACGACTATTCAAGAAATACATTGATTGAAGTAACGGCTTTTTAGTAATATATAAATttatgtataaatataaatgtagaggctttcttttctttgaacAGCAGCTGCACGTAAACACAGTGGCGTTGTGCCTCGCAACTGACCAGTGGATGAAAACCTGAACGGCAAACAAATACGCAACAAAAGTATATTCATCACTGGATAATATAGATAGACAAACAGCTGGAGGCCACATTGTTACAGTCACACTTTGCTCTGTAGTGCAATCAtcttctctctgcttctcttgcACGAACAAGTAAACGtggaaaattacatttctgCAGTTTTATGATGGAACAACAAATCTGTAGCGATGATTATTGTCGCCAAAATGTGTGCCGAGACACGCAGGAGGcttatttagttttgttgtgtatttgatCGTGTTTTTTAACTCTTGATGTGTGGAGTTATATTTCATGGCATCAGTTgaaagtaagtaaaaaaaaaaaaaaaaaaaacttaaagatTACAAGtcaatcatttaatttcatCACTGATCCATGACTATTGCAAAGTACTGTCATCGCTCAGTGATATTTAAAGCAAAGGCATGGCCTGACTTACTTACCATTTGTGTATATCAATGTAAAATtgcaaacatactgtattttcagCTCCTATGTtttgtcacgttattttttttaaatattaataatgaCCTGTATGGAGTATGCTAGTGTAACTGCCCCAGCTTTGGTCACGGGCAAATCAAAGCAATCTCATCTGGACTCATGATTCAACATGTTATTAATCCTGTGACTGAAACAGATAAGTGCTAGATTGGGCTCAGAAGCTTCTCATGAGGTTATTTTCATATTGTTCCAAGCTTTTGTAGCTTATTGTTGCAGACAGAATAATGCTGTGAAGAATAAAGTGTTGATCTGAGTAACTTA

Function

symbol description
ralbp1 Predicted to enable GTPase activator activity. Predicted to be involved in endocytosis; positive regulation of GTPase activity; and small GTPase mediated signal transduction. Predicted to act upstream of or within signal transduction. Predicted to be active in membrane. Is expressed in central nervous system; midbrain; midbrain neural keel; and neural plate. Human ortholog(s) of this gene implicated in pancreatic adenocarcinoma. Orthologous to human RALBP1 (ralA binding protein 1).

NR:

description
ralA-binding protein 1

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component

KEGG:

id description
K08773 RALBP1; RalA-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815836.1 True 3782 mRNA 0.48 10 16629680 16639812
XM_039815837.1 False 3767 mRNA 0.48 10 16629680 16639812

Neighbor

gene id symbol gene type direction distance location
twsg1a twsg1 coding upstream 808 16613574 ~ 16628872 (+)
ankrd12 ankrd12,LOC102778611 coding upstream 20217 16562196 ~ 16609463 (+)
ndufv2 ndufv2 coding upstream 69252 16553745 ~ 16560428 (+)
rab12 rab12 coding upstream 183138 16437581 ~ 16446542 (+)
LOC120568416 piezo2 coding upstream 200284 16344648 ~ 16429396 (+)
rab31 rab31,LOC108232866,LOC107383545 coding downstream 1002 16640814 ~ 16649143 (+)
vapal vapa coding downstream 11355 16651167 ~ 16679372 (+)
rheb rheb,LOC106516909,LOC108232948,LOC106592571,LOC106596806 coding downstream 393064 17032876 ~ 17039104 (+)
LOC120567614 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 coding downstream 403249 17043061 ~ 17045062 (+)
LOC120568716 acvr2b,LOC106516905,LOC108232890 coding downstream 407882 17047694 ~ 17060749 (+)
G115295 NA non-coding upstream 21138 16606703 ~ 16608542 (+)
G115223 NA non-coding upstream 198025 16430161 ~ 16431655 (+)
G115208 NA non-coding upstream 251161 16289237 ~ 16378519 (+)
G115207 NA non-coding upstream 360851 16262657 ~ 16268829 (+)
G115136 NA non-coding upstream 380033 16242987 ~ 16249647 (+)
G115350 LOC104967252 non-coding downstream 120623 16760435 ~ 16821676 (+)
G115404 NA non-coding downstream 517816 17157628 ~ 17158200 (+)
G115437 LOC101466820,LOC102797643,LOC103353954,LOC100700019 non-coding downstream 528761 17168573 ~ 17169818 (+)
G115442 LOC103353955 non-coding downstream 543340 17183152 ~ 17186653 (+)
G115445 NA non-coding downstream 564851 17204663 ~ 17210211 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 17474 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 101998 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 401129 16226307 ~ 16228551 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other upstream 708149 15865586 ~ 15921531 (+)
st6galnac3 st6galnac3 other upstream 786586 15764683 ~ 15843094 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other downstream 766685 17406497 ~ 17483553 (+)
LOC120567767 NA other downstream 1387468 18027280 ~ 18029895 (+)
G115729 NA other downstream 1665337 18305149 ~ 18354344 (+)
skila skil,LOC102782637 other downstream 1926821 18566633 ~ 18602263 (+)
LOC120568691 NA other downstream 2020617 18660429 ~ 18674140 (+)

Expression


Co-expression Network