LOC120568381


Basic Information

Item Value
gene id LOC120568381
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 458451 ~ 512917 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815875.1
TGCAGCAAGTCAGAGTGTGTCCATCCGCTGTGCACTCTCAATGCTCCGCGGGCTTATAATTGATGCTGGAAACTTGATGTAATAAATCTTATATACAATCAGGACAGCGTCAGCAAATCTCTCTTCagacacatcatcacatcatcgcTACACAAAGATACAACACTGTAAACCTGAAGAAGAAAACTCCACGAGAAAGTTTTTTGGTGATTAAAAATGTTCCAAAGGATCATCAGTCTGCTGGTGCTTCTCATGGCTGCTTGTTCAGCTCAGAGCACAGCTCCAAAACCTCAGCTGAGGTTGGTAAATGGTAACACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGATGGTTGGGACATAAACGACGCCGAGGTGGTCTGCCGACAACTGAGATGTGGCCCCGTCCAGTCGGCAACTAGTTCTGCCTCCTTTGGAAAAAGCACCGGACCGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTGGACATCGAGGGTTTGGCACTCATAACTGCCGCCATCATGGAGTCATCTGTTCTGGtGTAGCTCCGAAACCTCAGCTGAGGTTGGTAAATGGTAGCACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGATGGTTGGGATATAAACAACGCCGAGGTGGTCTGCCGACAGATGAGATGTGGCCCCGTCCAGTCTGCAACTAGTTCTGCCTCCTTTGGACAAGGCACCGGACCGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGTTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGCAACCATGGTGAAGATGCTGGAGTCATCTGTTCTGgTGTAGCTCCAAAACCTCAGCTGAGGTTGGTAAATGGTAACACACCATGCTCTGGTAGAGTGGAGATCCTCCATAGAAACCAGTGGGGAACAGTGTGTGATGATAGTTGGGATGTAAACGACGCAGAGGTGGTCTGCCGACAGCTGAGATGTGGCTCCGTCCAGTCAGCAACTAGTTCTGCCTCCTTTGGACAAGGCACCGGACCGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGCAACCATGGTGAAGATGCTGGAGTCATCTGTTCTGAGCCGGAGTTGGTGTGTGGACAGGATTACCTGCGTCTGACAGTCCAGAAGAGGCAGTTGGAGGAACGAGGGCTGAACGCATCCTCCGCTCACCTGATCGACCCGCGCTGCCAGCAGCAGGTCGACCAGCAGGAGGCGATGTGGTACCTGGTGCAGCGAAGGCAGGGTATCTGTGGAAATGTGGTAGAGACAAATGGCTCCCACATTACGTACTCCAACATTTTGTTTGTGTACCCGTCTGATTGGTCCAACGACTCGCTCTCCATCCCGATGAGCTTCCCGTTCTCCTGCGTCTTCCCGCTCAATGACATCACCAGCCTCGGAGCCGCCATTCGATACCAGCTGCCAGATCGACtctttttgactggcaagatggacCGCAAGCCTAAACAACAACTGCTACAAGTCGGCTTGGTGGGTTCAGGTGACCCCACCAGGGCGCAGATGACTCTGTACAAGAGACCGGACTACAGCGAGCCGTTCCCCGCTGGCCCGGTCAGCCTGCCACTGGGCGCCGCCCTGCACGTCGGCGTCTCCGTGGAAAACTACGACAACAACCACTACGTGCTCCTTCTGGAGCACTGCTACGTCACAAACTCGTCCAGCGCCGATGATCCTGCCATATACGACCTGATCCAGAACAGGTGTCCAGTTGACCGTCGCCAGGTGAAGGTGGCGGAAAGCGGTGTGTCGCAGCGAGCTCGCTTCTCGGCGCTGCTCTTCCTCTACCACGAGACGTATAAGGACGTTTATCTGCACTGCCGGATCAGCCTGTGTGACCGGGACAGCGCCCCCTGCAGCCCTAACTGTTCCAGGCGACGCGCTCGGTCCGccacagcagccaatcagcttccAGTCACTGTTGGACCAATCAGATGGTCATAACAAGAGTGCTGAGGCTGCAGAGGAATCAACTTCCTGTTGCTGAGGCAGAGAATCTTTATTACTTCACTTTATTACACAACAGTTTGGGTATTTTCTAAAACAGCTTTTTTAATTGTCACATTGTCAGAATGACAAATTAACAAGAAAATTAAACTGAACATCTGACTTTGTTTttgtgatgaaaataaaaataaaagatgatGAACCTTT
>XM_039815876.1
agtcacaattaacagaatggaactatgactagaaatagtagttgtagtagttcatggtgtagaagggcactgcagggcgttacattTGATTTGGCATTGTTAGTGTCAGCAATCAGAAGTTCAGAGTATTATTAAACAGAGATTGAAGAAAAGAGGGCAAAAGCAAcgggagaaggagaggaaaggacGATAGTTTCACAAAATCCAAAGGAAAGTGGAAGAAATTAAATGtgcaggaaggagagaagaggcAATAATATCAAGACTTAGATTTTGGACACACTGGGTTAAACAGCACACTGTTTAAAGgtttttgataattaaaaatGTTCCAAAGGATCATcggtctgctgctgcttctcatGGCTGCTTGTTCAGCTCAGAGCACAGCTCCTTGGCTGAGGTTGGTAAATGGTAACACATCATGCAACGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGATGGTTGGGATATAAACGACGCCAAGGTGGTCTGCCGACAGCTGAGATGTGGCCCCGTCCAGTCTGCAACTAGTTCTGCCTCCTTTGGACAAGGCACCGGACAGATCTGGATGGATGATGTTACCTGTAAAGGCAACGAGTCTTTGTTATCAGAATGTGGACATCGAAGGTTTGGCACTCATAACTGCGGCCATGGTGAAGATGCTGGAGTCATCTGTTCTGAGCCGGAGTTGGTGTGTGGACAGGATTACCTGCGTCTGACAGTCCAGAAGAGGCAGTTGGAGGAACGAGGGCTGAACGCATCCTCCGCTCACCTGATCGACCCGCGCTGCCAGCAGCAGGTCGACCAGCAGGAGGCGATGTGGTACCTGGTGCAGCGAAGGCAGGGTATCTGTGGAAATGTGGTAGAGACAAATGGCTCCCACATTACGTACTCCAACATTTTGTTTGTGTACCCGTCTGATTGGTCCAACGACTCGCTCTCCATCCCGATGAGCTTCCCGTTCTCCTGCGTCTTCCCGCTCAATGACATCACCAGCCTCGGAGCCGCCATTCGATACCAGCTGCCAGATCGACtctttttgactggcaagatggacCGCAAGCCTAAACAACAACTGCTACAAGTCGGCTTGGTGGGTTCAGGTGACCCCACCAGGGCGCAGATGACTCTGTACAAGAGACCGGACTACAGCGAGCCGTTCCCCGCTGGCCCGGTCAGCCTGCCACTGGGCGCCGCCCTGCACGTCGGCGTCTCCGTGGAAAACTACGACAACAACCACTACGTGCTCCTTCTGGAGCACTGCTACGTCACAAACTCGTCCAGCGCCGATGATCCTGCCATATACGACCTGATCCAGAACAGGTGTCCAGTTGACCGTCGCCAGGTGAAGGTGGCGGAAAGCGGTGTGTCGCAGCGAGCTCGCTTCTCGGCGCTGCTCTTCCTCTACCACGAGACGTATAAGGACGTTTATCTGCACTGCCGGATCAGCCTGTGTGACCGGGACAGCGCCCCCTGCAGCCCTAACTGTTCCAGGCGACGCGCTCGGTCCGccacagcagccaatcagcttccAGTCACTGTTGGACCAATCAGATGGTCATAACAAGAGTGCTGAGGCTGCAGAGGAATCAACTTCCTGTTGCTGAGGCAGAGAATCTTTATTACTTCACTTTATTACACAACAGTTTGGGTATTTTCTAAAACAGCTTTTTTAATTGTCACATTGTCAGAATGACAAATTAACAAGAAAATTAAACTGAACATCTGACTTTGTTTttgtgatgaaaataaaaataaaagatgatGAACCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815875.1 True 2331 mRNA 0.51 13 458451 512917
XM_039815876.1 False 1796 mRNA 0.50 10 458451 476188

Neighbor

gene id symbol gene type direction distance location
LOC120568382 NA coding downstream 5370 435287 ~ 453081 (-)
LOC120568383 NA coding downstream 25268 419901 ~ 433183 (-)
LOC120568379 NA coding downstream 40750 399034 ~ 417701 (-)
LOC120569047 LOC100692494,LOC102787312,LOC101472913,LOC107080869 coding downstream 60947 388691 ~ 397504 (-)
LOC120569059 NA coding downstream 131072 326426 ~ 327379 (-)
LOC120568477 NA coding upstream 10352 523269 ~ 531734 (-)
LOC120568671 LOC103374724,LOC100692224,LOC102307095 coding upstream 21791 534708 ~ 545516 (-)
amph amph coding upstream 80990 593907 ~ 623130 (-)
inhbab NA coding upstream 119770 632687 ~ 638896 (-)
LOC120568738 LOC106676760 coding upstream 163414 676331 ~ 677734 (-)
G110898 NA non-coding downstream 61260 375313 ~ 397191 (-)
G110895 NA non-coding downstream 85760 267135 ~ 372691 (-)
G110896 NA non-coding downstream 189052 256381 ~ 269399 (-)
G110899 NA non-coding downstream 197503 260603 ~ 260948 (-)
G110878 NA non-coding downstream 260215 197870 ~ 198236 (-)
LOC120567842 NA non-coding upstream 35418 548335 ~ 548652 (-)
G110946 NA non-coding upstream 164901 677818 ~ 767571 (-)
G110964 NA non-coding upstream 243004 755921 ~ 796589 (-)
G110958 NA non-coding upstream 293345 806262 ~ 808340 (-)
G110977 NA non-coding upstream 298529 811446 ~ 812017 (-)
G110889 LOC100692763,LOC108229211,LOC107383400 other downstream 75786 375712 ~ 382665 (-)
adhfe1 adhfe1 other downstream 156309 258075 ~ 302142 (-)
LOC120567755 NA other downstream 215352 235257 ~ 243099 (-)
G110840 NA other downstream 283586 57407 ~ 174865 (-)
G110957 NA other upstream 241346 754263 ~ 766300 (-)
G110988 NA other upstream 336265 849182 ~ 849492 (-)
G111136 NA other upstream 492154 1005071 ~ 1005925 (-)
G111133 NA other upstream 495316 1008233 ~ 1100670 (-)
G111134 NA other upstream 495977 1008894 ~ 1010100 (-)

Expression


Co-expression Network