LOC120568383


Basic Information

Item Value
gene id LOC120568383
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 419901 ~ 433183 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815879.1
GAGCTGCAGTTAAGAAGAGCTTTCCCAGAAATATGTTATTATACGGAGGATCTGAGACTGGCTGAAGTCTGTAAACCTGAAGAAGAAAACTCCATGAGAAAGTTTTTTGGTGATTAAAAATGTTCCAAAGGATCATcggtctgctgctgcttctcatGGCTGCTTGTTCAGCTCAGAGCACAGGTGAGTTTACAAGGGAGTCCACAGATGTCAACACCATGGTGTGTAATACCTGCGCTGAAGGTGAGACCTGCGTGAGCGACGACAAGATCAACTGGAGGTGTGGGCAGCCGGATGTCAACACCATGGTGTGTAATACCTGCGCTGAAGGTGAGACCAGTGTGAGCGACGACAAGATCAACTGGAGGTCTGGCCAGCCAGCTCTGAAACCTCAGCTGAGGTTGGTAAATGGTAGCACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGACGCTTGGGATATAAACGATGCCAAGGTGGTCTGCCGACAGATGAGATGTGGCCCCGTCCAGTCAGCAACTATTTCTGCCTCCTTTGGACAAGGCACCGGACCGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGCCACCATGGTGAAGATGCTGGAGTCATCTGTTCTGCTCCGACGGTGAGATTGGTCAATGGTAACACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTTTGTGATGATGGTTGGGACATAAATGACGCCAGGGTGGTCTGCCAACAACTGAGATGTGGCCCCGTCCAGTCGGCAACTAGTTCTGCCAACTTTGGACAAGGCACCGGACCGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGCGGCCATGGTGAAGATGCTGGAGTCATCTGTTCTGCGCCGAAATCTCAGCTGAGGTTGGTAAATGGTAACACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGATAGTTGGGATATCAATGACGCAAAGGTGGTCTGCCGACAGATGAGATGTGGCCCCGTTCAGTCAGCAACTAGTTCTGCCTCCTTTGGACCAGGCACCGGACAGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGCGGCCATGGTGAAGATGCTGGAGTCATCTGTTCTGGTGTAGCACCGGCGGTGAGGTTGGTAAATGGTAACACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGATGATTGGGACATAGACGACGCCAGGGTGGTCTGCCGACAGCTGAGATGTGGCCCCGTCCAGTATGCAACTAGTTCTGCCTCCTTTGGACAAGGCACCGGACCGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGTGGCCATGGTGAAGATGCTGGAGTCATCTGTTCTGGTGGACGCGGATGATGCCAAGCCTCAgctggaggagaaggaggggcAGGACGAGTACTCCCAGCTGCAGATGCCCGAGTGATTGGTCCATCCAGCTCCTTCATTAGCATATCTGACCCATATCCTGTAGCAGCGCTGGGCAGACGGACTGAACACGCTTCTGAAATCttgtttttataaatctttgtattttctgtttctctgtctgtctgaagaTCACACTAACTGTCTGCTCTGTCTTCCTGATGAATCTGTCTATCATTAAAGGCACATTTTATCTTTAAAATAA
>XM_039815880.1
GAGCTGCAGTTAAGAAGAGCTTTCCCAGAAATATGTTATTATACGGAGGATCTGAGACTGGCTGAAGTCTGTAAACCTGAAGAAGAAAACTCCATGAGAAAGTTTTTTGGTGATTAAAAATGTTCCAAAGGATCATcggtctgctgctgcttctcatGGCTGCTTGTTCAGCTCAGAGCACAGATGTCAACACCATGGTGTGTAATACCTGCGCTGAAGGTGAGACCTGCGTGAGCGACGACAAGATCAACTGGAGGTGTGGGCAGCCGGATGTCAACACCATGGTGTGTAATACCTGCGCTGAAGGTGAGACCAGTGTGAGCGACGACAAGATCAACTGGAGGTCTGGCCAGCCAGCTCTGAAACCTCAGCTGAGGTTGGTAAATGGTAGCACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGACGCTTGGGATATAAACGATGCCAAGGTGGTCTGCCGACAGATGAGATGTGGCCCCGTCCAGTCAGCAACTATTTCTGCCTCCTTTGGACAAGGCACCGGACCGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGCCACCATGGTGAAGATGCTGGAGTCATCTGTTCTGCTCCGACGGTGAGATTGGTCAATGGTAACACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTTTGTGATGATGGTTGGGACATAAATGACGCCAGGGTGGTCTGCCAACAACTGAGATGTGGCCCCGTCCAGTCGGCAACTAGTTCTGCCAACTTTGGACAAGGCACCGGACCGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGCGGCCATGGTGAAGATGCTGGAGTCATCTGTTCTGCGCCGAAATCTCAGCTGAGGTTGGTAAATGGTAACACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGATAGTTGGGATATCAATGACGCAAAGGTGGTCTGCCGACAGATGAGATGTGGCCCCGTTCAGTCAGCAACTAGTTCTGCCTCCTTTGGACCAGGCACCGGACAGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGCGGCCATGGTGAAGATGCTGGAGTCATCTGTTCTGGTGTAGCACCGGCGGTGAGGTTGGTAAATGGTAACACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGATGATTGGGACATAGACGACGCCAGGGTGGTCTGCCGACAGCTGAGATGTGGCCCCGTCCAGTATGCAACTAGTTCTGCCTCCTTTGGACAAGGCACCGGACCGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGTGGCCATGGTGAAGATGCTGGAGTCATCTGTTCTGGTGGACGCGGATGATGCCAAGCCTCAgctggaggagaaggaggggcAGGACGAGTACTCCCAGCTGCAGATGCCCGAGTGATTGGTCCATCCAGCTCCTTCATTAGCATATCTGACCCATATCCTGTAGCAGCGCTGGGCAGACGGACTGAACACGCTTCTGAAATCttgtttttataaatctttgtattttctgtttctctgtctgtctgaagaTCACACTAACTGTCTGCTCTGTCTTCCTGATGAATCTGTCTATCATTAAAGGCACATTTTATCTTTAAAATAA
>XM_039815881.1
GACAGAGCTGCAGTTAAGAAGAGCTTTCCCAGAAATATGTTATTATACGGAGGATCTGAGACTGGCTGAAGTCTGTAAACCTGAAGAAGAAAACTCCATGAGAAAGTTTTTTGGTGATTAAAAATGTTCCAAAGGATCATcggtctgctgctgcttctcatGGCTGCTTGTTCAGCTCAGAGCACAGGTGAGTTTACAAGGGAGTCCACAGATGTCAACACCATGGTGTGTAATACCTGCGCTGAAGGTGAGACCTGCGTGAGCGACGACAAGATCAACTGGAGGTGTGGGCAGCCGGATGTCAACACCATGGTGTGTAATACCTGCGCTGAAGGTGAGACCAGTGTGAGCGACGACAAGATCAACTGGAGGTCTGGCCAGCCAGCTCTGAAACCTCAGCTGAGGTTGGTAAATGGTAGCACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGACGCTTGGGATATAAACGATGCCAAGGTGGTCTGCCGACAGATGAGATGTGGCCCCGTCCAGTCAGCAACTATTTCTGCCTCCTTTGGACAAGGCACCGGACCGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGCCACCATGGTGAAGATGCTGGAGTCATCTGTTCTGCTCCGACGCTGAGGTTGGTAAATGGTAACACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGATAGTTGGGATATCAATGACGCAAAGGTGGTCTGCCGACAGATGAGATGTGGCCCCGTTCAGTCAGCAACTAGTTCTGCCTCCTTTGGACCAGGCACCGGACAGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGCGGCCATGGTGAAGATGCTGGAGTCATCTGTTCTGGTGTAGCACCGGCGGTGAGGTTGGTAAATGGTAACACACCATGCTCTGGTAGAGTGGAGATCCTCCATAACAACCAGTGGGGAACAGTGTGTGATGATGATTGGGACATAGACGACGCCAGGGTGGTCTGCCGACAGCTGAGATGTGGCCCCGTCCAGTATGCAACTAGTTCTGCCTCCTTTGGACAAGGCACCGGACCGATCTGGATGGATGATGTTGCCTGTACAGGCAGCGAGTCTTTGCTATCAGAATGTCGACATCCAGGGTTTGGCACTCATAACTGTGGCCATGGTGAAGATGCTGGAGTCATCTGTTCTGGTGGACGCGGATGATGCCAAGCCTCAgctggaggagaaggaggggcAGGACGAGTACTCCCAGCTGCAGATGCCCGAGTGATTGGTCCATCCAGCTCCTTCATTAGCATATCTGACCCATATCCTGTAGCAGCGCTGGGCAGACGGACTGAACACGCTTCTGAAATCttgtttttataaatctttgtattttctgtttctctgtctgtctgaagaTCACACTAACTGTCTGCTCTGTCTTCCTGATGAATCTGTCTATCATTAAAGGCACATTTTATCTTTAAAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815879.1 True 1935 mRNA 0.50 9 419901 433179
XM_039815880.1 False 1911 mRNA 0.50 9 419901 433179
XM_039815881.1 False 1621 mRNA 0.50 9 419901 433183

Neighbor

gene id symbol gene type direction distance location
LOC120568379 NA coding downstream 2200 399034 ~ 417701 (-)
LOC120569047 LOC100692494,LOC102787312,LOC101472913,LOC107080869 coding downstream 22397 388691 ~ 397504 (-)
LOC120569059 NA coding downstream 92522 326426 ~ 327379 (-)
LOC120567752 NA coding downstream 109839 309109 ~ 310062 (-)
LOC120568960 LOC103372168,LOC101474198,LOC102083149 coding downstream 329959 64577 ~ 89942 (-)
LOC120568382 NA coding upstream 2104 435287 ~ 453081 (-)
LOC120568381 NA coding upstream 25268 458451 ~ 512917 (-)
LOC120568477 NA coding upstream 90086 523269 ~ 531734 (-)
LOC120568671 LOC103374724,LOC100692224,LOC102307095 coding upstream 101525 534708 ~ 545516 (-)
amph amph coding upstream 160724 593907 ~ 623130 (-)
G110898 NA non-coding downstream 22710 375313 ~ 397191 (-)
G110895 NA non-coding downstream 47210 267135 ~ 372691 (-)
G110896 NA non-coding downstream 150502 256381 ~ 269399 (-)
G110899 NA non-coding downstream 158953 260603 ~ 260948 (-)
G110878 NA non-coding downstream 221665 197870 ~ 198236 (-)
G110925 NA non-coding upstream 64361 497544 ~ 543185 (-)
LOC120567842 NA non-coding upstream 115152 548335 ~ 548652 (-)
G110946 NA non-coding upstream 244635 677818 ~ 767571 (-)
G110964 NA non-coding upstream 322738 755921 ~ 796589 (-)
G110958 NA non-coding upstream 373079 806262 ~ 808340 (-)
G110889 LOC100692763,LOC108229211,LOC107383400 other downstream 37236 375712 ~ 382665 (-)
adhfe1 adhfe1 other downstream 117759 258075 ~ 302142 (-)
LOC120567755 NA other downstream 176802 235257 ~ 243099 (-)
G110840 NA other downstream 245036 57407 ~ 174865 (-)
G110957 NA other upstream 321080 754263 ~ 766300 (-)
G110988 NA other upstream 415999 849182 ~ 849492 (-)
G111136 NA other upstream 571888 1005071 ~ 1005925 (-)
G111133 NA other upstream 575050 1008233 ~ 1100670 (-)
G111134 NA other upstream 575711 1008894 ~ 1010100 (-)

Expression


Co-expression Network