LOC120568423



Basic Information


Item Value
gene id LOC120568423
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 15070483 ~ 15088029 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039815944.1
TTAACTTTTCGGGGAATTCTCTTTCACAACAATTAACTGGCTCTGATGTGAACTGGGCACCTCGCTCTGCTCTAGTATTTTAAGTCTTAACAAAATGTGTGTGAGAtatcttggatttgttcttttGGTTTGGTTCCCAGGAGGACTGCATTCACAAAGTGCAGGTCAGCCGTGTCGTGCTCTGACTCTTGATGGTGGTTATTTGGTCCCGGAAGAAAACACGTATTCTCATGAAGCCAACCTCACGTATGGCTGTGATAATGGACTTAAACCAGCAGTGGAGGGTTGGTGGGCCACAATCACATGTCAAAATGGTGAATGGTCGCCTAAACCACAGTGTATAGaTGAAAAAGCTTGCATTCCACCAGATATACCCAAtgcacaatacaaaaaaaacctcAGAGGTTGGTATAAGAACAATCAACGACTCAGGGTAAGATGTGACGAAGGATATGAACACAAAGGCAATGATGCTACAGCCATATGTACAAATGGAACATGGTCCTCTGTGCCGGTCTGTGAGAAAAGTATCAAAGCATGTGGTGAGCCCCCTAAAATCCCCCATGCAGTCATCATCCATCAGGTATACCATGAGTTGTTTGCTGCAGATTCAGTAGTGCAGTATGAATGTGAAGATGGATATACTGTAGAGGGAGGAGGAACCAAGGAATACATCACTTGCATGTCTGGAAGCTGGACTGAAGGCCCAATGTGCAACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcaggtggagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTCCATTCACAGCAGACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcaggtggagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTCCATTCACAGCAGGCAGAGGAACCAGACCAGAGAAGGGACTTTGTGGAGACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcaggtggagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTTCATTCACAGCAGTCATCCACTGTGGAGCATACCCAATCGTACCAAACGGTGATGTTGTGAAAGAAGATCCAATGTTTTTGAAATACCAATGCAATGCCTTTTATAAACAAGTGGGTTCAGACACCGTGAGGTGTCACAGTGAAGGCAACTGGTCACAACTACCCATCTGCCAAGAGGCATTCTGTGTCATAGATCTTGCTCAATATCCTGTGGGCGGTGTTAAACTATCTGGACGTGAATATGTAACTGAAGGAGAAACAAAGTACATTCAGTGTATCTGGAATTATTACAGCAGTCGTGTTCAGTGCATcaatagaacatttttttataCCCAGTGTTGTCATCACTATGACCATTACCGGGGAGCTTGCTCGTAAAGCACAGCCGACGATTCGCTGCTCGACTGACAACTAAAGCCAAGTTGGACACTTCTAAAATTCCTCCACCAGAAAACGATACCCAAAACATTATTGCTTTTTCATTTGGATCAagaatatatacacacaatgtTGGAGCTTATTTTTATGACAGGAACTCTTGATGTATTAATAACATGATCTGTACTTTTAAATAAAGTTGATATGTCAACAGCAGACTGAATAAAATGTTCACTATAGAAATCT
>XM_039815945.1
TTAACTTTTCGGGGAATTCTCTTTCACAACAATTAACTGGCTCTGATGTGAACTGGGCACCTCGCTCTGCTCTAGTATTTTAAGTCTTAACAAAATGTGTGTGAGAtatcttggatttgttcttttGGTTTGGTTCCCAGGAGGACTGCATTCACAAAGTGCAGGTCAGCCGTGTCGTGCTCTGACTCTTGATGGTGGTTATTTGGTCCCGGAAGAAAACACGTATTCTCATGAAGCCAACCTCACGTATGGCTGTGATAATGGACTTAAACCAGCAGTGGAGGGTTGGTGGGCCACAATCACATGTCAAAATGGTGAATGGTCGCCTAAACCACAGTGTATAGaTGAAAAAGCTTGCATTCCACCAGATATACCCAAtgcacaatacaaaaaaaacctcAGAGGTTGGTATAAGAACAATCAACGACTCAGGGTAAGATGTGACGAAGGATATGAACACAAAGGCAATGATGCTACAGCCATATGTACAAATGGAACATGGTCCTCTGTGCCGGTCTGTGAGAAAAGTATCAAAGCATGTGGTGAGCCCCCTAAAATCCCCCATGCAGTCATCATCCATCAGGTATACCATGAGTTGTTTGCTGCAGATTCAGTAGTGCAGTATGAATGTGAAGATGGATATACTGTAGAGGGAGGAGGAACCAAGGAATACATCACTTGCATGTCTGGAAGCTGGACTGAAGGCCCAATGTGCAACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcaggtggagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTCCATTCACAGCAGACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcaggtggagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTCCATTCACAGCAGGCAGAGGAACCAGACCAGAGAAGGGACTTTGTGGAGACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTTCATTCACAGCAGTCATCCACTGTGGAGCATACCCAATCGTACCAAACGGTGATGTTGTGAAAGAAGATCCAATGTTTTTGAAATACCAATGCAATGCCTTTTATAAACAAGTGGGTTCAGACACCGTGAGGTGTCACAGTGAAGGCAACTGGTCACAACTACCCATCTGCCAAGAGGCATTCTGTGTCATAGATCTTGCTCAATATCCTGTGGGCGGTGTTAAACTATCTGGACGTGAATATGTAACTGAAGGAGAAACAAAGTACATTCAGTGTATCTGGAATTATTACAGCAGTCGTGTTCAGTGCATcaatagaacatttttttataCCCAGTGTTGTCATCACTATGACCATTACCGGGGAGCTTGCTCGTAAAGCACAGCCGACGATTCGCTGCTCGACTGACAACTAAAGCCAAGTTGGACACTTCTAAAATTCCTCCACCAGAAAACGATACCCAAAACATTATTGCTTTTTCATTTGGATCAagaatatatacacacaatgtTGGAGCTTATTTTTATGACAGGAACTCTTGATGTATTAATAACATGATCTGTACTTTTAAATAAAGTTGATATGTCAACAGCAGACTGAATAAAATGTTCACTATAGAAATCT
>XM_039815946.1
TTAACTTTTCGGGGAATTCTCTTTCACAACAATTAACTGGCTCTGATGTGAACTGGGCACCTCGCTCTGCTCTAGTATTTTAAGTCTTAACAAAATGTGTGTGAGAtatcttggatttgttcttttGGTTTGGTTCCCAGGAGGACTGCATTCACAAAGTGCAGGTCAGCCGTGTCGTGCTCTGACTCTTGATGGTGGTTATTTGGTCCCGGAAGAAAACACGTATTCTCATGAAGCCAACCTCACGTATGGCTGTGATAATGGACTTAAACCAGCAGTGGAGGGTTGGTGGGCCACAATCACATGTCAAAATGGTGAATGGTCGCCTAAACCACAGTGTATAGaTGAAAAAGCTTGCATTCCACCAGATATACCCAAtgcacaatacaaaaaaaacctcAGAGGTTGGTATAAGAACAATCAACGACTCAGGGTAAGATGTGACGAAGGATATGAACACAAAGGCAATGATGCTACAGCCATATGTACAAATGGAACATGGTCCTCTGTGCCGGTCTGTGAGAAAAGTATCAAAGCATGTGGTGAGCCCCCTAAAATCCCCCATGCAGTCATCATCCATCAGGTATACCATGAGTTGTTTGCTGCAGATTCAGTAGTGCAGTATGAATGTGAAGATGGATATACTGTAGAGGGAGGAGGAACCAAGGAATACATCACTTGCATGTCTGGAAGCTGGACTGAAGGCCCAATGTGCAACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcaggtggagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTCCATTCACAGCAGACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcaggtggagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTCCATTCACAGCAGACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcaggtggagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTTCATTCACAGCAGTCATCCACTGTGGAGCATACCCAATCGTACCAAACGGTGATGTTGTGAAAGAAGATCCAATGTTTTTGAAATACCAATGCAATGCCTTTTATAAACAAGTGGGTTCAGACACCGTGAGGTGTCACAGTGAAGGCAACTGGTCACAACTACCCATCTGCCAAGAGGCATTCTGTGTCATAGATCTTGCTCAATATCCTGTGGGCGGTGTTAAACTATCTGGACGTGAATATGTAACTGAAGGAGAAACAAAGTACATTCAGTGTATCTGGAATTATTACAGCAGTCGTGTTCAGTGCATcaatagaacatttttttataCCCAGTGTTGTCATCACTATGACCATTACCGGGGAGCTTGCTCGTAAAGCACAGCCGACGATTCGCTGCTCGACTGACAACTAAAGCCAAGTTGGACACTTCTAAAATTCCTCCACCAGAAAACGATACCCAAAACATTATTGCTTTTTCATTTGGATCAagaatatatacacacaatgtTGGAGCTTATTTTTATGACAGGAACTCTTGATGTATTAATAACATGATCTGTACTTTTAAATAAAGTTGATATGTCAACAGCAGACTGAATAAAATGTTCACTATAGAAATCT
>XM_039815947.1
TTAACTTTTCGGGGAATTCTCTTTCACAACAATTAACTGGCTCTGATGTGAACTGGGCACCTCGCTCTGCTCTAGTATTTTAAGTCTTAACAAAATGTGTGTGAGAtatcttggatttgttcttttGGTTTGGTTCCCAGGAGGACTGCATTCACAAAGTGCAGGTCAGCCGTGTCGTGCTCTGACTCTTGATGGTGGTTATTTGGTCCCGGAAGAAAACACGTATTCTCATGAAGCCAACCTCACGTATGGCTGTGATAATGGACTTAAACCAGCAGTGGAGGGTTGGTGGGCCACAATCACATGTCAAAATGGTGAATGGTCGCCTAAACCACAGTGTATAGaTGAAAAAGCTTGCATTCCACCAGATATACCCAAtgcacaatacaaaaaaaacctcAGAGGTTGGTATAAGAACAATCAACGACTCAGGGTAAGATGTGACGAAGGATATGAACACAAAGGCAATGATGCTACAGCCATATGTACAAATGGAACATGGTCCTCTGTGCCGGTCTGTGAGAAAAGTATCAAAGCATGTGGTGAGCCCCCTAAAATCCCCCATGCAGTCATCATCCATCAGGTATACCATGAGTTGTTTGCTGCAGATTCAGTAGTGCAGTATGAATGTGAAGATGGATATACTGTAGAGGGAGGAGGAACCAAGGAATACATCACTTGCATGTCTGGAAGCTGGACTGAAGGCCCAATGTGCAACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcaggtggagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTCCATTCACAGCAGACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcaggtggagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTCCATTCACAGCAGACAGAGGAACCAGTTTAGGTACTGGAGATGATGGAGGTACATCTGGCAGCAGGAcaccacctgcagGATGGTCTGCCACCTCTGGCTCGaatgagagagacaggagacCTTCATTCACAGCAGTCATCCACTGTGGAGCATACCCAATCGTACCAAACGGTGATGTTGTGAAAGAAGATCCAATGTTTTTGAAATACCAATGCAATGCCTTTTATAAACAAGTGGGTTCAGACACCGTGAGGTGTCACAGTGAAGGCAACTGGTCACAACTACCCATCTGCCAAGAGGCATTCTGTGTCATAGATCTTGCTCAATATCCTGTGGGCGGTGTTAAACTATCTGGACGTGAATATGTAACTGAAGGAGAAACAAAGTACATTCAGTGTATCTGGAATTATTACAGCAGTCGTGTTCAGTGCATcaatagaacatttttttataCCCAGTGTTGTCATCACTATGACCATTACCGGGGAGCTTGCTCGTAAAGCACAGCCGACGATTCGCTGCTCGACTGACAACTAAAGCCAAGTTGGACACTTCTAAAATTCCTCCACCAGAAAACGATACCCAAAACATTATTGCTTTTTCATTTGGATCAagaatatatacacacaatgtTGGAGCTTATTTTTATGACAGGAACTCTTGATGTATTAATAACATGATCTGTACTTTTAAATAAAGTTGATATGTCAACAGCAGACTGAATAAAATGTTCACTATAGAAATCT

Function


GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko04979 Cholesterol metabolism
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039815944.1 True 1750 mRNA 0.45 15 15070483 15088029
XM_039815945.1 False 1744 mRNA 0.45 15 15070483 15088029
XM_039815946.1 False 1714 mRNA 0.45 14 15070483 15088029
XM_039815947.1 False 1708 mRNA 0.45 14 15070483 15088029

Neighbor


gene id symbol gene type direction distance location
cdc73 cdc73 coding upstream 8516 15027835 ~ 15061967 (+)
LOC120567612 LOC104945192,LOC104921265 coding upstream 67451 15001264 ~ 15003032 (+)
LOC120568793 rgs21,LOC103361784,LOC103139988,LOC107082594,LOC101157323,LOC107373725 coding upstream 74321 14994823 ~ 14996162 (+)
mier1b mier1 coding upstream 277845 14781744 ~ 14792638 (+)
dynlt5 tctex1d1,LOC100691399 coding upstream 290616 14777956 ~ 14779867 (+)
LOC120568425 NA coding downstream 1390 15089419 ~ 15093399 (+)
LOC120568427 NA coding downstream 9548 15097577 ~ 15111430 (+)
LOC120568088 NA coding downstream 40793 15128822 ~ 15138022 (+)
LOC120568090 NA coding downstream 60707 15148736 ~ 15151429 (+)
LOC120568935 tsc22d2,LOC104947426,LOC101076449,LOC102205509,LOC107559349 coding downstream 82863 15170892 ~ 15194493 (+)
G114747 LOC105904583 non-coding upstream 2032 15068149 ~ 15068451 (+)
G114746 NA non-coding upstream 4044 15066123 ~ 15066439 (+)
G114745 NA non-coding upstream 5090 15065090 ~ 15065393 (+)
G114650 NA non-coding upstream 258274 14811662 ~ 14812209 (+)
G114585 NA non-coding upstream 376581 14693566 ~ 14693902 (+)
G114793 NA non-coding downstream 73246 15161275 ~ 15251219 (+)
G114889 setd9,LOC102796737 non-coding downstream 328703 15416732 ~ 15418048 (+)
G114904 NA non-coding downstream 344642 15432671 ~ 15432944 (+)
G114905 NA non-coding downstream 348075 15436104 ~ 15437753 (+)
G114909 ripk2 non-coding downstream 356449 15444478 ~ 15455375 (+)
ro60 trove2 other upstream 44275 15013743 ~ 15026208 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other upstream 77400 14985777 ~ 14993083 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other upstream 774490 14287150 ~ 14295993 (+)
si:ch73-71c20.5 NA other upstream 1884119 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 1945020 13123030 ~ 13125463 (+)
G114789 NA other downstream 63767 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 250528 15338557 ~ 15368780 (+)
asip2b agrp2,LOC105941385,LOC102299529,LOC102795060,LOC103358555 other downstream 384673 15472702 ~ 15478462 (+)
zgc:153115 klf13,LOC104948390,LOC103358333,LOC101073550,LOC105030379,LOC106568757,LOC107752329 other downstream 432753 15520782 ~ 15528769 (+)
slc35a3b LOC103357859,LOC104957008,LOC101481522,LOC102792347 other downstream 466442 15554471 ~ 15568494 (+)

Expression



Co-expression Network