XLOC_004735


Basic Information

Item Value
gene id XLOC_004735
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 25502406 ~ 25504380 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010742
gtttggtacagcatattatttgcagtaaataattgaactgaacaatTCTGCCTCATTGTTAGatcctgtgtgtttgttttcatcatgTGACCCTCCCCATGTGCTCTTTTGTTCTAGTTCCCGCCATTAGTTAATGTTCATCTGTTCCACCTGTTTTTTTGCCCCTGTGTGTGATcagttcatcatcatcatcatcctctgtATTTATATCCCTTACTTTGGTTTAGTCATTGTCCGGTATTTTCTACGTTGATGCTAGCAGAGCACTGTCGTCTGAAGATAGTCCCCGGGGCAATCTCGCCGCCTGTGTGAAGTGGACACTGGCGAGGAATCGATCATCGTTCGTCAACTGTGCGGAGGAAGAACTCATCAGTGCCACTCCTTACCCAGTGACCAACCCAACAAACATCTGCTGGGAGTGTGTGCCAGAGCCCATCGCAGACGGAAAGCCACCCGCGATATGTGACCCATCGCCATCAAGAGCGTCAGAGAGGAACATTACCGAGCAGGAGGAGCTCAACCAGCCGGCCTCAGCTCTCCGACCCAACGGCTCAACGTTAGCTCTCTTCTCATCTCCTCCATGGACCGTCAGCCCACCAGCTCCACCTGGCTTACTTCTTCCCTCTTCTCCGTCTTGGTCAGTTGTCACTCTGCCTCCACCTCTGGACTTTGCTCCTCCGGTTGCGCCTCATTCCTCCATCCTGCACCGTTAAGCTCCTCCTTCCCTCAAGCTACGCCTCGGTCCTCTGTTGCTCTGGCTTCGCCGCGGGTTTCCAGACCTGTGTCGTCGCTTGGTCGTGTGAGCCTTCCACTCCACCTCGGCCCTCCGGGACCTCAATGTCACTTACG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010742 True 849 lncRNA 0.52 2 25502406 25504380

Neighbor

gene id symbol gene type direction distance location
XLOC_004734 ppm1bb coding upstream 15162 25432626 ~ 25487244 (+)
XLOC_004733 CR932077.1 coding upstream 72035 25312018 ~ 25430371 (+)
XLOC_004732 mta3 coding upstream 217896 25223799 ~ 25284510 (+)
XLOC_004731 CR848736.1 coding upstream 287679 25201543 ~ 25214727 (+)
XLOC_004730 pigf coding upstream 391432 25097754 ~ 25110974 (+)
XLOC_004736 six3b coding downstream 96305 25600685 ~ 25603341 (+)
XLOC_004737 prkcea coding downstream 136100 25640480 ~ 25770232 (+)
XLOC_004738 CR932018.1 coding downstream 143747 25648127 ~ 25648243 (+)
XLOC_004739 epas1a coding downstream 271354 25775734 ~ 25830268 (+)
XLOC_004740 glud1b coding downstream 341114 25845494 ~ 25881944 (+)
XLOC_004728 CR385067.1 non-coding upstream 427286 25073305 ~ 25075120 (+)
XLOC_004726 NA non-coding upstream 557902 24944172 ~ 24944504 (+)
XLOC_004724 BX255907.1 non-coding upstream 936814 24565478 ~ 24565592 (+)
XLOC_004744 NA non-coding downstream 984973 26489353 ~ 26491973 (+)
XLOC_004748 NA non-coding downstream 1085264 26589644 ~ 26593298 (+)
XLOC_004751 NA non-coding downstream 1187439 26691819 ~ 26692051 (+)
XLOC_004752 NA non-coding downstream 1233051 26737431 ~ 26834192 (+)

Expression


Co-expression Network