cdc20 (cdc20,LOC102779045)


Basic Information

Item Value
gene id cdc20
gene name cdc20,LOC102779045
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24138155 ~ 24142097 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815959.1
GCGTCAACGTCACGAAATTCAAAATttagaaagagaagagagaacgGTCGGTGTTGCTCCGGTGTATTCCACGTTTTCTTGAAGAAGTGAGCTCGTTCTGTTAATTTTGAGGTTTCAGAAGGGCAATATTTGACGGTCGTGTGAAAACCTGGATATAATGGCGCAGTTTGGGTTTGAGAACGACATCCATAGCATCTTGAAGCTGGATATGCCCATCACAAACGCTCCTATGGCAAGGTGGCAGAGGAAGGCTAGCTCATCAAACTCATCCGCCTTGAACGGATTGTCTCCTGGCAAATCTGCCAATGTGTCGCTCAGTTCATCAAAAACGCCAAGCAAAACACCAGgcaaaaataaaaagcagacaCCATCTAAGATGGGGGGCGACCGCTTCATTCCCACCAGAAACAGCAAACAAATggatgtggcaagttttctgcTCTCAAAAGAGAATGAGCCTGTGGACGCAAACAATACAGCTGGAACATCAGAAAGCCAGAAAGCATGGTCTATGTCCCTAAATGGATACAACATTGATGATGCAAAGATCCTTCACCTTGGAGGGAAACCACTGAATGCTCCAGAAGGCTATCAAAACAACTTGAAAGTCCTCTACAGTCAGGGTGCAACCCCTGCCTCTGTCAAAAAGACTAGATACATATCTTCAACTCCTGACAAAATCCTGGATGCTCCTGATCTTCGAAATGATTTCTATTTGAATCTGATTGACTGGAGCAGTCGGAATGTTCTCGCTGTGGCACTTCATAACAGTGTTTACCTGTTGGATGCCTCTCAAGGAGACATCACTCTCCTCATGAGGTTGGAGAGTGAGGACATCTACATCTGCTCACTATCCTGGACCAAAGAGGGAACCTACCTAGCTATCGGCACCAGTGACTGCAAAATTCAGtTGTGGGACGTTTACAACCAGAAGCGTCTACGCAGCTTGGCCAGCCATACGTCTAGAGTTGCTTCACTGAGCTGGAATGACCATGTTCTCACCAggtacttcttttttttttttttttttttctcatcattTATGATAATAGACAAACTTGCAATTTCAATTGTGTGTTGGACTCATGTTTCTTTCCCTAGTGGCTCGAGATCAGGACACATCCACCATCATGATGTGAGGGTGGCAGACCACCACATCTTTACGCTTACTGGTCACTCACAGGAGGTGTGTGGGCTTAAGTGGTCACCTGATGGACGATACCTGGCCAGTGGAGGCAATGATAACTTGGTTTATGTATGGCCACGTATGCAGGAGGGCACCAACACTAACTCTGTCCAATGCTGGAGTGATCATCAAGGAGCTGTGAAGGCTTTGGCCTGGTGTCCATGGCAGCCAAATATCCTTGCATCTGGAGGTGGTACCAGTGACCGTCACATCCGCATCTGGAATGTTAACAGTGGCTCCTGCATCAGTTCACTTGACACTCAGTCTCAGatCTCGTCACTGTTGTTTTCACCCAACTACAAAGAACTTGTCTCTGCCCATGGATATGCCCACAACAATGTTGTTATCTGGAAGTACCCTGCTCTCACCAGGGTTGCAGAGCTCAAGGGCCACGAGGACAGAGTGCTCAGTTTGATTCTGAGTCCAGACTGCTCCACTATTGCGACTGTTGCTGGAGATGAGACTATCCGCATGTGGAAGAGCTTTGAAGTGGATCCTGTTAAGAAGGCCAAGGAGAGGCTGGTCAAGTCAACTAGCAGTGTAATTCATCAGTCAATCAGATAGTTTGCTCTgtgtgtagtttatttatttttataaaggtGTTTTGgtaatgtgcttttttttttaaatctacaaAGATGTACATGGTTTTAGATGTAACTGGCAGTTTACAGCTCCCATTGATGTAATGGGTGGTTGGTCTCAGTTGTTGAAACAGGTCTGTTAATGTGGTAAGTTGAGtggcttttttttgggggggggggggttaagcaATCCAATGTATTTAACTTTTATTAAAAACTAGGGATGCATTGTATACCACAGACTAGTTTATAAATAAATGCTTATAAATAAATGGTTTGATTAATGTGCTGTCGTGTATTGGTACTGCCATGGTGCAAACTGTAGGGCTTATATCAATTCACATGTAGTGATAACTATTATCTCCCCCAGTTCCTCATGGTAATGCCTGCCAAACCAACAGAATACAAATTCCATGTTTATCCTGCAAATATGTTATTTGTTAGCTTAGCTGTGGTTTAAGGTTTAAAAGGCAGTCTTCTCAAAAGTTTACTGGTGGTGTTAGTCTGAATCTGGTTGCTGTGTATTCTGTAGAAATTGCCTTATGACCTGTAGAGGTCACTCTCTGAAGTTtaacaaattgttgcagatgTATTGGAACTGAGGTTTAGAGTATAAGCTAATATAAAGTGTCACTTCTTAATTTCTAAT
>XM_039815960.1
TAAACCGTGTGGCGTCAACGTCACGAAATTCAAAATttagaaagagaagagagaacgGTCGGTGTTGCTCCGGTGTATTCCACGTTTTCTTGAAGAAGTCGTGTGAAAACCTGGATATAATGGCGCAGTTTGGGTTTGAGAACGACATCCATAGCATCTTGAAGCTGGATATGCCCATCACAAACGCTCCTATGGCAAGGTGGCAGAGGAAGGCTAGCTCATCAAACTCATCCGCCTTGAACGGATTGTCTCCTGGCAAATCTGCCAATGTGTCGCTCAGTTCATCAAAAACGCCAAGCAAAACACCAGgcaaaaataaaaagcagacaCCATCTAAGATGGGGGGCGACCGCTTCATTCCCACCAGAAACAGCAAACAAATggatgtggcaagttttctgcTCTCAAAAGAGAATGAGCCTGTGGACGCAAACAATACAGCTGGAACATCAGAAAGCCAGAAAGCATGGTCTATGTCCCTAAATGGATACAACATTGATGATGCAAAGATCCTTCACCTTGGAGGGAAACCACTGAATGCTCCAGAAGGCTATCAAAACAACTTGAAAGTCCTCTACAGTCAGGGTGCAACCCCTGCCTCTGTCAAAAAGACTAGATACATATCTTCAACTCCTGACAAAATCCTGGATGCTCCTGATCTTCGAAATGATTTCTATTTGAATCTGATTGACTGGAGCAGTCGGAATGTTCTCGCTGTGGCACTTCATAACAGTGTTTACCTGTTGGATGCCTCTCAAGGAGACATCACTCTCCTCATGAGGTTGGAGAGTGAGGACATCTACATCTGCTCACTATCCTGGACCAAAGAGGGAACCTACCTAGCTATCGGCACCAGTGACTGCAAAATTCAGtTGTGGGACGTTTACAACCAGAAGCGTCTACGCAGCTTGGCCAGCCATACGTCTAGAGTTGCTTCACTGAGCTGGAATGACCATGTTCTCACCAggtacttcttttttttttttttttttttctcatcattTATGATAATAGACAAACTTGCAATTTCAATTGTGTGTTGGACTCATGTTTCTTTCCCTAGTGGCTCGAGATCAGGACACATCCACCATCATGATGTGAGGGTGGCAGACCACCACATCTTTACGCTTACTGGTCACTCACAGGAGGTGTGTGGGCTTAAGTGGTCACCTGATGGACGATACCTGGCCAGTGGAGGCAATGATAACTTGGTTTATGTATGGCCACGTATGCAGGAGGGCACCAACACTAACTCTGTCCAATGCTGGAGTGATCATCAAGGAGCTGTGAAGGCTTTGGCCTGGTGTCCATGGCAGCCAAATATCCTTGCATCTGGAGGTGGTACCAGTGACCGTCACATCCGCATCTGGAATGTTAACAGTGGCTCCTGCATCAGTTCACTTGACACTCAGTCTCAGatCTCGTCACTGTTGTTTTCACCCAACTACAAAGAACTTGTCTCTGCCCATGGATATGCCCACAACAATGTTGTTATCTGGAAGTACCCTGCTCTCACCAGGGTTGCAGAGCTCAAGGGCCACGAGGACAGAGTGCTCAGTTTGATTCTGAGTCCAGACTGCTCCACTATTGCGACTGTTGCTGGAGATGAGACTATCCGCATGTGGAAGAGCTTTGAAGTGGATCCTGTTAAGAAGGCCAAGGAGAGGCTGGTCAAGTCAACTAGCAGTGTAATTCATCAGTCAATCAGATAGTTTGCTCTgtgtgtagtttatttatttttataaaggtGTTTTGgtaatgtgcttttttttttaaatctacaaAGATGTACATGGTTTTAGATGTAACTGGCAGTTTACAGCTCCCATTGATGTAATGGGTGGTTGGTCTCAGTTGTTGAAACAGGTCTGTTAATGTGGTAAGTTGAGtggcttttttttgggggggggggggttaagcaATCCAATGTATTTAACTTTTATTAAAAACTAGGGATGCATTGTATACCACAGACTAGTTTATAAATAAATGCTTATAAATAAATGGTTTGATTAATGTGCTGTCGTGTATTGGTACTGCCATGGTGCAAACTGTAGGGCTTATATCAATTCACATGTAGTGATAACTATTATCTCCCCCAGTTCCTCATGGTAATGCCTGCCAAACCAACAGAATACAAATTCCATGTTTATCCTGCAAATATGTTATTTGTTAGCTTAGCTGTGGTTTAAGGTTTAAAAGGCAGTCTTCTCAAAAGTTTACTGGTGGTGTTAGTCTGAATCTGGTTGCTGTGTATTCTGTAGAAATTGCCTTATGACCTGTAGAGGTCACTCTCTGAAGTTtaacaaattgttgcagatgTATTGGAACTGAGGTTTAGAGTATAAGCTAATATAAAGTGTCACTTCTTAATTTCTAAT
>XM_039815961.1
GCGTCAACGTCACGAAATTCAAAATttagaaagagaagagagaacgGTCGGTGTTGCTCCGGTGTATTCCACGTTTTCTTGAAGAAGTGAGCTCGTTCTGTTAATTTTGAGGTTTCAGAAGGGCAATATTTGACGGTCGTGTGAAAACCTGGATATAATGGCGCAGTTTGGGTTTGAGAACGACATCCATAGCATCTTGAAGCTGGATATGCCCATCACAAACGCTCCTATGGCAAGGTGGCAGAGGAAGGCTAGCTCATCAAACTCATCCGCCTTGAACGGATTGTCTCCTGGCAAATCTGCCAATGTGTCGCTCAGTTCATCAAAAACGCCAAGCAAAACACCAGgcaaaaataaaaagcagacaCCATCTAAGATGGGGGGCGACCGCTTCATTCCCACCAGAAACAGCAAACAAATggatgtggcaagttttctgcTCTCAAAAGAGAATGAGCCTGTGGACGCAAACAATACAGCTGGAACATCAGAAAGCCAGAAAGCATGGTCTATGTCCCTAAATGGATACAACATTGATGATGCAAAGATCCTTCACCTTGGAGGGAAACCACTGAATGCTCCAGAAGGCTATCAAAACAACTTGAAAGTCCTCTACAGTCAGGGTGCAACCCCTGCCTCTGTCAAAAAGACTAGATACATATCTTCAACTCCTGACAAAATCCTGGATGCTCCTGATCTTCGAAATGATTTCTATTTGAATCTGATTGACTGGAGCAGTCGGAATGTTCTCGCTGTGGCACTTCATAACAGTGTTTACCTGTTGGATGCCTCTCAAGGAGACATCACTCTCCTCATGAGGTTGGAGAGTGAGGACATCTACATCTGCTCACTATCCTGGACCAAAGAGGGAACCTACCTAGCTATCGGCACCAGTGACTGCAAAATTCAGtTGTGGGACGTTTACAACCAGAAGCGTCTACGCAGCTTGGCCAGCCATACGTCTAGAGTTGCTTCACTGAGCTGGAATGACCATGTTCTCACCAgTGGCTCGAGATCAGGACACATCCACCATCATGATGTGAGGGTGGCAGACCACCACATCTTTACGCTTACTGGTCACTCACAGGAGGTGTGTGGGCTTAAGTGGTCACCTGATGGACGATACCTGGCCAGTGGAGGCAATGATAACTTGGTTTATGTATGGCCACGTATGCAGGAGGGCACCAACACTAACTCTGTCCAATGCTGGAGTGATCATCAAGGAGCTGTGAAGGCTTTGGCCTGGTGTCCATGGCAGCCAAATATCCTTGCATCTGGAGGTGGTACCAGTGACCGTCACATCCGCATCTGGAATGTTAACAGTGGCTCCTGCATCAGTTCACTTGACACTCAGTCTCAGatCTCGTCACTGTTGTTTTCACCCAACTACAAAGAACTTGTCTCTGCCCATGGATATGCCCACAACAATGTTGTTATCTGGAAGTACCCTGCTCTCACCAGGGTTGCAGAGCTCAAGGGCCACGAGGACAGAGTGCTCAGTTTGATTCTGAGTCCAGACTGCTCCACTATTGCGACTGTTGCTGGAGATGAGACTATCCGCATGTGGAAGAGCTTTGAAGTGGATCCTGTTAAGAAGGCCAAGGAGAGGCTGGTCAAGTCAACTAGCAGTGTAATTCATCAGTCAATCAGATAGTTTGCTCTgtgtgtagtttatttatttttataaaggtGTTTTGgtaatgtgcttttttttttaaatctacaaAGATGTACATGGTTTTAGATGTAACTGGCAGTTTACAGCTCCCATTGATGTAATGGGTGGTTGGTCTCAGTTGTTGAAACAGGTCTGTTAATGTGGTAAGTTGAGtggcttttttttgggggggggggggttaagcaATCCAATGTATTTAACTTTTATTAAAAACTAGGGATGCATTGTATACCACAGACTAGTTTATAAATAAATGCTTATAAATAAATGGTTTGATTAATGTGCTGTCGTGTATTGGTACTGCCATGGTGCAAACTGTAGGGCTTATATCAATTCACATGTAGTGATAACTATTATCTCCCCCAGTTCCTCATGGTAATGCCTGCCAAACCAACAGAATACAAATTCCATGTTTATCCTGCAAATATGTTATTTGTTAGCTTAGCTGTGGTTTAAGGTTTAAAAGGCAGTCTTCTCAAAAGTTTACTGGTGGTGTTAGTCTGAATCTGGTTGCTGTGTATTCTGTAGAAATTGCCTTATGACCTGTAGAGGTCACTCTCTGAAGTTtaacaaattgttgcagatgTATTGGAACTGAGGTTTAGAGTATAAGCTAATATAAAGTGTCACTTCTTAATTTCTAAT

Function

symbol description
cdc20 Predicted to enable anaphase-promoting complex binding activity and ubiquitin ligase activator activity. Predicted to be involved in anaphase-promoting complex-dependent catabolic process and positive regulation of anaphase-promoting complex-dependent catabolic process. Predicted to act upstream of or within cell division and positive regulation of ubiquitin protein ligase activity. Predicted to be part of anaphase-promoting complex. Is expressed in proliferative region. Orthologous to human CDC20 (cell division cycle 20).

NR:

description
cell division cycle protein 20 homolog

GO:

id name namespace
GO:0051301 cell division biological_process

KEGG:

id description
K03363 CDC20; cell division cycle 20, cofactor of APC complex

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815959.1 True 2419 mRNA 0.43 10 24138166 24142097
XM_039815960.1 False 2381 mRNA 0.44 10 24138155 24142097
XM_039815961.1 False 2323 mRNA 0.44 11 24138166 24142097

Neighbor

gene id symbol gene type direction distance location
LOC120569088 NA coding upstream 48213 24083696 ~ 24089942 (+)
LOC120568612 NA coding upstream 81080 24054779 ~ 24057075 (+)
clcn2a clcn2,LOC102213982,LOC102290034 coding upstream 133144 23963949 ~ 24005011 (+)
LOC120567818 gpr55,LOC103396173,LOC103366713 coding upstream 232626 23899208 ~ 23905529 (+)
snorc NA coding upstream 241244 23891144 ~ 23896911 (+)
bokb LOC103360102,LOC100707238 coding downstream 10063 24152160 ~ 24160339 (+)
kif1ab NA coding downstream 28948 24171045 ~ 24197651 (+)
espnlb NA coding downstream 58146 24200243 ~ 24209452 (+)
rab6bb rab6b,LOC104929189,LOC105028793,LOC104957876,LOC103360106,LOC100708038,LOC101156359,LOC106534664 coding downstream 67453 24209550 ~ 24216455 (+)
aire NA coding downstream 78140 24220237 ~ 24223598 (+)
G117389 NA non-coding upstream 62840 23999854 ~ 24075315 (+)
G117406 NA non-coding upstream 93671 24043969 ~ 24044484 (+)
G117405 NA non-coding upstream 94614 24036655 ~ 24043541 (+)
G117398 NA non-coding upstream 117100 24019654 ~ 24021055 (+)
G117385 NA non-coding upstream 155172 23982191 ~ 23982983 (+)
G117476 NA non-coding downstream 8361 24150458 ~ 24150771 (+)
G117487 LOC104957881 non-coding downstream 22757 24164854 ~ 24169555 (+)
G117488 NA non-coding downstream 27571 24169668 ~ 24169953 (+)
G117523 NA non-coding downstream 115457 24257554 ~ 24258831 (+)
LOC120568139 NA non-coding downstream 195596 24337693 ~ 24339256 (+)
LOC120569114 NA other upstream 83451 24049764 ~ 24054704 (+)
G117400 LOC104965054 other upstream 114496 24022441 ~ 24023659 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other upstream 223657 23912664 ~ 23914498 (+)
G117353 LOC103366712 other upstream 229754 23905870 ~ 23908401 (+)
G117319 LOC101487892,LOC104941256 other upstream 282998 23850879 ~ 23855157 (+)
LOC120568789 kiaa0040,LOC102782613 other downstream 427431 24569528 ~ 24578312 (+)
LOC120569045 cacybp other downstream 525782 24667879 ~ 24675754 (+)
selenot1a selenot,LOC103365166 other downstream 720899 24862996 ~ 24870087 (+)
G117664 NA other downstream 808471 24950568 ~ 24954247 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other downstream 845402 24987499 ~ 25044057 (+)

Expression


Co-expression Network