LOC120568440


Basic Information

Item Value
gene id LOC120568440
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32603143 ~ 32614898 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815974.1
TGTGTTTATTCTTTGTACCAattagcttctgctagctgaaATCGGCACACACTAAAACCAACAGCGAGCTAACACATTTGGCTGCAGTTTGTGTACTGGCAGCGGCTTCAGCAATGGCCTGTTTCGGCTAGCTAATGCGACTGAGTTACAGACACTTTTCTCGCTTTAAAGTTAAGGCTTCGCTGccactttgttgttgttttttggggtttgtttTTAACAATGCTGAGCAGCGTCGCTCTGCGGGCTCAGATTGCCTCCATAATCGATGCCCTGTCCAAAGCAGCTGTAGCAGAAATCGCCAAAGTTGTGGAGGATGGCGTGGTGGAGTTGCGGCTGGAAATATGTCAGCGTGAAAATGACATCAAGAAGCTGAAGGGCAACATTGAGGTTCTGCACGACGAGCTGAGATCACTGCAGGAGACAGTGACCCTGCGACCTGACAGCCATGGCAGAGATGATGGTCAGAATGGTGTTGGTGATGAGAGGAGCTTGCTTGAACAGGGGCCCGCTGATAAGGACACAAACAGCCTGTCCGTACCTGAGGTGCGGGTGAAATGTGAACCTGTGGAGGAAGGAAGTGAAGAGGCCAGAGAAGAAGAACTGGGCTCGTATGACCGGGACCGCACGCAGTGGAGGCTGACAACGCAAACTCCGGCAGGACGCAACAACTCCGACTATTTACAACTAGGGCAGAACCCCGTGTCGTGTCTCCCTGAATCTTCTCTGGACAGGGGACTGGCTGCGCCCTGCAGCAGCTCCTCTGGGTGTCAGCCGAGCGCGTTTGGCCGCGGGCTGCTGGGTTACGGTCCGTACCGTAACTCGTACAACATCGCGCGGAGGAGGACGGTGAAGAGGTTAATGTTTAAGAAAGGCTTCATCTGTCCATACTGCGGTAAATGTTTTGAGCGAGCCGGGCACCTGGAGAGGCATAAAAGGATACACACTGGCGAGAAGCCTTACCGCTGCGAGATATGCGGGCGACGCTTCAATCAGAAATGCAGCCTAAAGGAGCACACGAAGATACACAGAAGATGTATTGAGCCCAGTCCACTTGAGATCAAAGTGGGCAAAGAGAAACAGACTCCCGAGGGGAATCCATGTGCCGATGCTCCTCGCACCGAAGAAGAGAGCCAGGGGGAAGCTGAGGACGGCCTACCTAAGAACGAGGATATTCTCGCAACACCCGTACACGTCAAATCTGAGCCCGCAGAGGAGAACCTATTACAACCAGCGTTTCACGGAGCAGCCGAGCAGACGGGGGACAACCTCAGCGAGAACTTCCCAACATTTGCGAgagacagccagcagtggatGACCAGATTACACGGGCAAAACCACGCGGAGATCAGCGGCGCAGAGTACCTGGGCAGCTCGGCCTTCCCGGGGAAAGCTCAGTTACTGCCGCCACCAGTCGAAGCTTCTTGTAGCACGTTCTCCTTTCCAGGGAAACCGTACGGGGAGCTCAAAAACAGCATGGTCTCCCAAACACCGTTCGGATCCCCAGACACGCTTCTATCAAGCGAGGCGGGCTTGCACGGAATGGCGGCAGCGCTGAGTCACCACAGACAGAGAGGAATCAGGTCGATTCAGATGATCAAACCGAAGAAAAGCTTCGTCTGCCAGTACTGCGGCAAGGTCTTTGAGCGCGTCGGCCACCTCGAAAGACACTTACGAATTCATACCGGGGAGAAGCCGTATGGTTGCCAGATCTGCGGGAGGTGCTTCAATCAGAAGAGTAGCCTCAAGGGCCACATGAAGACGCACAGGAATGGGGAGAACGCAGATGTGCTGGAGGCCCATCATATGATGTTTACGATGCCTGATAGCCAGCCGTTGAAGAACCTGGCAGAAGCCAAGACCGGACTGTCAGCTTTAGAGGAACAGTTCCTGGGCACCGCGTACGGCGAGGCAGCTGGTGAGCAAACAGTGACGGTTAAGCTGGAGCCAAACGGGGAGGATTTCCAAACTCTACTGACTGATAACGACACCGGAGCACCCGACCACAGGCAGCTGTGGACATCAGGGATAGAGAAGAGTAGTGATCCTGACCAAGCGGTCTGCGTGCTTTTACATGATGCCAAGTATCACCTCAGTCCTGCTGCTGGAGCAGCCAACGGGCAGCAGGGATTTACATCGCCGATAAGAGATCTGCCTTTTCTAGACgacaaagaaaaggaagaaacgATGCACAATAATCAGTATTCTATGATGGGTATGCAATCAAGAAGCTCTGATATGACTCTGGCACCTGAGCTGCAAGATCAACATATTGCACCAGAGGCGGCTGTGAATGAGTACACAGCACTGAGTGATAGGGCTCGCGAGGGAGGTGTGTTTGAATTTAATATGAGCGCCTCAGGCAACCAGGCGGACAACTGTGACGGGGACGCCGCCGGGCAAAATTGCTTTATATGCTCAAGTTGTGGGCAAAGCTTTGatagttttaatttatttcagaGGCACCAGTGTAAAAATATCACAGAGCAATCCTTCAGTTGTGAGATATGTGGTAAGATTTTCAATCAGATGAGCATCCTGAAATTGCACCTTAAACTTCATGTATGATATACACTACAAAAGGAGAACTACGCGATTATCCACCAAGCTTCATCACATTCAGTCGTAACACATGGCAAAGTGCACACGGTCGACATGCCAATGTGACATCTAAATAAATGCTCGGCATGTCCCAAAAGTTAATGCAgaagaacaacaaaaaatatcttGTATTTGCAGGACTGATTAATTTCAATCTTCTTCGCAGTAACGCCAGTCCGTTAAGCTTCTGTCACATTTCCAGTACAACATGTACTTTGCAcaaaatattttcctttttaattttacCTACTTCATctcctcatttataaaacacttttttaaagGTGATTAAGCATTGTTGGGTGTGTGACACTGTTGATCCTTGCTTGCTTAAAGGACAATtacggcgcaaaatgaacctaggggttaataacgtgAAAAAATTCCAAAACAATCTTTCTTGGGACCATTCAACCATTAACTGAATAAGAATTTTGACCAAAAAGGCTGATAAATCTCTACGGAGGGTTAccgtgaaaagatacaggcaacgcaattttctgttcacatgAACGTGACATGTTAAAATCAGCTGTATGTTCACATGAACGGAGCATGTTAAAAGCAGTTGATAGAGACGGTCATGGCTACTGGAGGAGCGGAAGAACTTGGAAAAGCCGTGAGCGGCAGTTGGTAGTTGAGTTGCGTGAGAAAAGGGggctttgagccgggtacagggcaCCGCGAGCTGCTGGTCGTTTTGGCTGACATTATGGTTAAGTTTTGGCGACAAAAAGTGAGTGTTATgcggcaccaaaacgactagttaagtttaggaaaaagatggtggtttggattaaaacactgcCAAGGAACATTATTTAATGTTATTAACGTTATTGAAGTCCTTTGTTTTTCCTGGGAAAGCGAACTCCACTCCCCGGTTTGAACGCGCTGCTTTTTATGAAAGTTCTTTAAGTAATggaaagcatatatatatatatatatatatatatattcccccCTTTTTGTGCTGGTCCTAAAATTTATCCGATCCGTGACTCAAAACTGTGATCCGAAccgtgagttttgtgatccgttGCACACCTAATTAGAAACCCTaaatctttcagcatattgtaatttgAGTTGTCTGAGTGAcaactggtggtggtgatggcgcagtggatatgacacgtgcctttggtgtgggagatccgggttcaattcccactgcgatacatcaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815974.1 True 3790 mRNA 0.49 4 32603143 32614898

Neighbor

gene id symbol gene type direction distance location
LOC120568447 NA coding downstream 2687 32594658 ~ 32600456 (-)
LOC120568564 kcnj10,LOC100694690,LOC101485288 coding downstream 47454 32538197 ~ 32555689 (-)
LOC120568566 NA coding downstream 65052 32524542 ~ 32538091 (-)
LOC120568565 NA coding downstream 89161 32488817 ~ 32513982 (-)
LOC120568891 NA coding downstream 736446 31865738 ~ 31866697 (-)
LOC120568450 NA coding upstream 3148 32618046 ~ 32623091 (-)
si:dkeyp-68b7.12 arhgap30 coding upstream 14544 32629442 ~ 32647388 (-)
tesk2 tesk2,LOC100707995,LOC102795977,LOC102307376,LOC102211946 coding upstream 44637 32659535 ~ 32713327 (-)
nectin4b NA coding upstream 109902 32724800 ~ 32754122 (-)
LOC120568446 vangl2 coding upstream 153697 32768595 ~ 32793782 (-)
G119567 NA non-coding downstream 9099 32593374 ~ 32594044 (-)
G119528 NA non-coding downstream 32461 32569997 ~ 32570682 (-)
G119523 NA non-coding downstream 36752 32565972 ~ 32566391 (-)
G119492 NA non-coding downstream 149095 32438827 ~ 32454048 (-)
G119482 NA non-coding downstream 184148 32417963 ~ 32418995 (-)
G119570 NA non-coding upstream 34791 32649689 ~ 32649976 (-)
G119590 NA non-coding upstream 142312 32757210 ~ 32757652 (-)
G119593 NA non-coding upstream 145674 32760572 ~ 32760843 (-)
LOC120568464 NA non-coding upstream 323803 32938701 ~ 32940160 (-)
G119686 NA non-coding upstream 357777 32972675 ~ 32973003 (-)
LOC120568568 NA other downstream 228625 32364461 ~ 32374518 (-)
G119465 cadm3,LOC106600493 other downstream 376783 32216502 ~ 32226360 (-)
G119379 NA other downstream 551704 32047477 ~ 32051439 (-)
zeb1a LOC103364416,LOC100701828,LOC102292734,LOC101079552 other downstream 1027950 31469595 ~ 31575193 (-)
LOC120568745 NA other downstream 1145986 31455599 ~ 31457157 (-)
fcer1gl NA other upstream 146071 32760969 ~ 32765211 (-)
LOC120567697 copa,LOC103137970 other upstream 213466 32828364 ~ 32832509 (-)
G119631 LOC104961532,LOC101466547 other upstream 234821 32849719 ~ 32865274 (-)
zgc:66427 LOC103370245 other upstream 364308 32979206 ~ 32988559 (-)
LOC120568437 NA other upstream 602292 33217190 ~ 33256937 (-)

Expression


Co-expression Network