LOC120568450


Basic Information

Item Value
gene id LOC120568450
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32618046 ~ 32623091 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816003.1
aaccactgGGAAGCTGCTTCGCTTCACTGCTGAAGCCCAGCTGTTTAATAAAGCTTGTCATTTGCttctgctgtgtttttatttctattcaCTCGGGACGGAGGATGTCTTTCCCCTCCCCTTTCGGTTCGCAGGTCGCGGCCATCATGGATGTGTTAGCGAAAGCTGCGGTCGCCGAAATAACGAAGCTGGTGGAGGACGGTAACGTGATGCTGCGCCTGGAGATGTGTCGGAGGGACAGCGAGATTCAGGAGCTCAAAACGAGTTTGAAGCTGATGGAGGTTGAACTCTGCAACGCTCAGGAAGCCGCCGCGACCCGAGCTACGGAGGACAAACCGGAACAAACAGCCGGGAATCAGGTACCGCGAACAGATAAAAAAGAAGATGAGGAAACATGCGCAGTGTATCTGGAACCAAAGTCTGCTCATTCACTGCAGCCCGGCCATGGAACGGAGGAGAGCCATGACGTGAGCCCAGCGGTGAAACGCGAGCCCGCCGATGAACTCGCCACACAGGAAATGGCAGACAACACTGGAACAGCAGACAACACTGGAACAGCAGACGTTTGCTTTGAGCTGGGAGAGCCAGATGACCTGATCTGGCCTCCTCCTGCTTGTAGCATATTTGAGAAAAGCTCTGTTGCAATGCAGCCGCACATATCGCTTTTCTCCCCTCATGCTGAGCAATATGCCGCTCCTAGAAATACAGAAAGCCAATATAACTCTTCATCAGCCGCAGCAGAGGGAATTGCAGATGATTCCTTAAGTGTGCCGATAAAAGTAGAGGTAGAGATTCACCCCATGTGCATGGGAAGTACCACTTTAGAGTCTGTTCCTAATGAACAGTTCAGGCGTGCTTCACACCCTGCAGTCAGTCAGGACCCGTGCTCGCAACAGGCTGGGCCATCACTAGCCCCGCCCCATCCACAGAGGGCCACAGCAGCCAGTTTAGgatcacacacagaggatcacatCCTCAATAGAAACCACCTGAGAGCAAAAAGGCTAATGAACGTTTGGAGAACCAATCAGAAACTGTTCATCTGCTCGGTCTGCAACAGGGGTTTCCCTCGCATGACTCAGCTGGAAGAACACAAGGCCTCCCACCAACTCTTTAAACCTTTCAGGTGCCTCGAATGCGGGAAGTCGTTCACCCAGAAGACCCGGCTGAAGACGCACCAGAGTGTGCACACGGGGGAGAGGCCGTTCAGTTGCAAAATCTGCGGCAAGATGTTTTCCAGGCAGGACAACTGCCTGAGGCACGAGCGCTTCCACAGCGGGCTAAAGCCGCACAGCTGCGGACAGTGTGGCAAAAGCTTCACTGTGCTGGGTAACCTCAAAATCCATCAAGAGATTCACCTGCAAGGAAGATAGCACTTAGAAGACAATTGGCCCGGTGTGCATTGACAGTTTGAATGCATCGAATGCAACAATCCAATGTATACTaggggactgttcgttattaaTTTAAGGGatcaccggaggagttttgggcccttttagtcaaaatagaccgtcagcaatacattttggatgaccctccaaCATGATTGGGAGAAAAaggatgaccctccccaacaatttattgtaggctactgaTTTGCGCTTGGCAAAGCTGTACAgatttccattgtttttttacagccatgacataaGCTGGCTAAACGGCTGCATTCTTATCTGACGCaacccactcctctgttatggtgtggtggccatttcagtagctttactcactaacattgttgtggaaacacaataagcatggaaactaaatgcacacttcctgcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816003.1 True 1791 mRNA 0.50 2 32618046 32623091

Neighbor

gene id symbol gene type direction distance location
LOC120568440 NA coding downstream 3148 32603143 ~ 32614898 (-)
LOC120568447 NA coding downstream 17590 32594658 ~ 32600456 (-)
LOC120568564 kcnj10,LOC100694690,LOC101485288 coding downstream 62357 32538197 ~ 32555689 (-)
LOC120568566 NA coding downstream 79955 32524542 ~ 32538091 (-)
LOC120568565 NA coding downstream 104064 32488817 ~ 32513982 (-)
si:dkeyp-68b7.12 arhgap30 coding upstream 6351 32629442 ~ 32647388 (-)
tesk2 tesk2,LOC100707995,LOC102795977,LOC102307376,LOC102211946 coding upstream 36444 32659535 ~ 32713327 (-)
nectin4b NA coding upstream 101709 32724800 ~ 32754122 (-)
LOC120568446 vangl2 coding upstream 145504 32768595 ~ 32793782 (-)
ncstn ncstn coding upstream 173006 32796097 ~ 32815490 (-)
G119567 NA non-coding downstream 24002 32593374 ~ 32594044 (-)
G119528 NA non-coding downstream 47364 32569997 ~ 32570682 (-)
G119523 NA non-coding downstream 51655 32565972 ~ 32566391 (-)
G119492 NA non-coding downstream 163998 32438827 ~ 32454048 (-)
G119482 NA non-coding downstream 199051 32417963 ~ 32418995 (-)
G119570 NA non-coding upstream 26598 32649689 ~ 32649976 (-)
G119590 NA non-coding upstream 134119 32757210 ~ 32757652 (-)
G119593 NA non-coding upstream 137481 32760572 ~ 32760843 (-)
LOC120568464 NA non-coding upstream 315610 32938701 ~ 32940160 (-)
G119686 NA non-coding upstream 349584 32972675 ~ 32973003 (-)
LOC120568568 NA other downstream 243528 32364461 ~ 32374518 (-)
G119465 cadm3,LOC106600493 other downstream 391686 32216502 ~ 32226360 (-)
G119379 NA other downstream 566607 32047477 ~ 32051439 (-)
zeb1a LOC103364416,LOC100701828,LOC102292734,LOC101079552 other downstream 1042853 31469595 ~ 31575193 (-)
LOC120568745 NA other downstream 1160889 31455599 ~ 31457157 (-)
fcer1gl NA other upstream 137878 32760969 ~ 32765211 (-)
LOC120567697 copa,LOC103137970 other upstream 205273 32828364 ~ 32832509 (-)
G119631 LOC104961532,LOC101466547 other upstream 226628 32849719 ~ 32865274 (-)
zgc:66427 LOC103370245 other upstream 356115 32979206 ~ 32988559 (-)
LOC120568437 NA other upstream 594099 33217190 ~ 33256937 (-)

Expression


Co-expression Network