LOC120568452 (LOC103367094)


Basic Information

Item Value
gene id LOC120568452
gene name LOC103367094
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32716753 ~ 32721611 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816005.1
gccatttggctggtagacgaaaatgttaattttgaagcctggttGTACTGCCCAAACGCTGAATGTTGTTTAGTTTTTAGTCGTGCTGAGACATTTTGTCCTACCATCAGCACCGTACTGTATGTCCTGCGTCACATGACCACCAGCATTTCCTGTTACACTTCCATGTTTTTCGCCTCAAACACAAACCGTAATGTAAACTACAACGGGCGGAATAGTCACTGTCGTGTGATCTGTCGCACATAGAAAGTTAGAGTGTAACGTCGTGTCGCGTCGCTGCAGCTGGCGGAGGTGCTGGTCCGGGGCAACATGGCCAACTGTGTGGCTTTCCAGAGCAAGCTAACCTCCATCATGGAGATGCTAGCTAAAGCTGCCGTGGTGGAAATCAGCCAGCTGTGGGAGGACGGTTTCGCCCTCGTACAGGTCGAGCTCCGCCGGAGGGAGAGCGAGATTGAAGCCCTGAACAGAAAGGTGATGATGATGGAAAACGAGCGGTTAACGGTGCTGTCTCAGGCCCAGACTAACGTTACCAATCCGACCTCATCATCTTCCTCCAAGAGAGAGCAGCAGACCCAGCTGCTGCCGCCCACCGGTGATGGGCCGATTATAGATTCAGTCCAGACACTGTCTTGTgatcagagcatcagagagaaggcGGACacctcagccaatcacagaacgCCACCGCCATCCCAGACGGAAGAGAAACAGTGCGAGCAGCTCAAGTCCGGCGCGTGTGAAAGCGACGGCAGAGACGACGACGACGAAGACTTGATAGTCAAGCTAGAGGACGAGGACGACGTCCAGATCGTGGAGCAGACGGTGGACTCGGATCCCAGCGTCGGCGACGGAGCGGGGCACCACGAGATGGAAGTGAACCTCCAGCCCGCCGAGGTTATGGAAGAACAAGAGAGCCAGCAGTGGTCGTCGGTTTCGGTGGGAGACAGCGACACCGCCGATGACTCGGACTGCTTTTTTGAGCCGAAGCAGCTGTCCCAAAATCTGGACTCGGAAATCCTGCTCATTCAGAATGCTTTGGACATTTTTGATCATTCGGCAGAGACGGCGTACTCTGACAGGTTTGCGAGGGACAATGGACAAGGTGCGTCAAGTAAATCAAGAGCTCCTGTGACTTTTAGCCAAGCTCAGCCAAGTCAGCCCATAGAAGCAAATAATCACCCCGAGAGAGGAGTGTCCATCAGATTCCTCGCAGAGAAACAACCCCAAACTAAAAACGCGTCGGCTTTTAACCCGGACGGCAGATTCTTCCTTTTAAACGACCCGGAGCTGCATAAAACGATAGCGAGTCGCCGCATCAAGGAGAAATGGTTCATCTGCCCGTTCTGCGGCAAGAGCTTCGATCGCGTCAGCCACCTGGAGATCCACCAGCGAATCCACACCGGAGAGAAACCGTACACATGCGATACGTGTGGCAAGTGTTTTTCTCAGAGGAGCAACCTTCGCACTCACCAGCGGACTCACAAAGAGGCTCTATCCCAAAATGCAGTTTGATTCAATAGGTTTTGAATTTTGAGTGAGAAAAGCTAGAAAtatctgtgtggcattcatgtctagattaaaggtgctctaagcgatgtcacgctaaaacagtttttttttgtcacatacagcaaacatctcctctctATCCGCtatctgcctgt

Function

NR:

description
PREDICTED: zinc finger and SCAN domain-containing protein 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816005.1 True 1664 mRNA 0.52 2 32716753 32721611

Neighbor

gene id symbol gene type direction distance location
si:ch211-155e24.3 si:ch211-155e24.3,LOC108427093,LOC107549816,LOC107750208,LOC107671805 coding upstream 59896 32651304 ~ 32656857 (+)
LOC120568820 LOC101162955,LOC103374738 coding upstream 130404 32575313 ~ 32586349 (+)
LOC120568570 NA coding upstream 230345 32472620 ~ 32486408 (+)
LOC120568571 NA coding upstream 275658 32437458 ~ 32441095 (+)
LOC120568561 NA coding upstream 360931 32347289 ~ 32355822 (+)
myadmb LOC104961532,LOC101466547 coding downstream 121488 32843099 ~ 32852397 (+)
ltb4r2b NA coding downstream 207840 32929451 ~ 32938337 (+)
sdr39u1 sdr39u1 coding downstream 219595 32941206 ~ 32945386 (+)
parp2 parp2 coding downstream 231665 32953276 ~ 32973757 (+)
apol1 LOC106928621,LOC103148595,LOC106953189,LOC103370244 coding downstream 329394 33051005 ~ 33070053 (+)
G119556 NA non-coding upstream 6381 32709295 ~ 32710372 (+)
G119541 NA non-coding upstream 82034 32633628 ~ 32634719 (+)
G119519 NA non-coding upstream 152267 32563841 ~ 32564486 (+)
G119453 kcnj10 non-coding upstream 161015 32549144 ~ 32555738 (+)
LOC120568573 NA non-coding upstream 211460 32504212 ~ 32505293 (+)
G119579 NA non-coding downstream 35772 32757383 ~ 32757653 (+)
G119583 vangl2,LOC103367097 non-coding downstream 48817 32770428 ~ 32770954 (+)
G119586 NA non-coding downstream 71406 32793017 ~ 32793495 (+)
G119622 pex19 non-coding downstream 114470 32836081 ~ 32837200 (+)
G119623 pex19 non-coding downstream 115692 32837303 ~ 32838088 (+)
LOC120568569 NA other upstream 245183 32452705 ~ 32471570 (+)
cadm3 cadm3 other upstream 490270 32128458 ~ 32226483 (+)
LOC120567694 LOC103373937,LOC106569580,LOC100136182,LOC107383461,LOC106960171 other upstream 645441 32067563 ~ 32071312 (+)
pip4p1a tmem55b,LOC101161334 other upstream 802049 31888908 ~ 31914704 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other upstream 847258 31865755 ~ 31869495 (+)
G119582 vangl2,LOC103137974 other downstream 47096 32768707 ~ 32769852 (+)
G119584 vangl2,LOC102795188 other downstream 53463 32775074 ~ 32775682 (+)
G119585 NA other downstream 59377 32780988 ~ 32781471 (+)
tep1 LOC104950563,LOC104941471 other downstream 267206 32988817 ~ 33049081 (+)
LOC120568463 NA other downstream 442305 33163916 ~ 33166100 (+)

Expression


Co-expression Network