LOC120568473 (LOC102208486,LOC100705462,LOC101474278,LOC102304097,LOC102795444)


Basic Information

Item Value
gene id LOC120568473
gene name LOC102208486,LOC100705462,LOC101474278,LOC102304097,LOC102795444
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 15329264 ~ 15330964 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816037.1
CTTCCATTCAGCCTCAACAAGCAAAAGAGGACGGGGATCATCAGGAAAGATGTTTTTTGTGGCGGGGGCCAAAAATACAGCAGGAGCAGGCAGAGGAAATGAAAGGAGGTCAATCTACCAGAAATTTCGTGAGGTAGATTTATTGGACAAGAAGAAGACAGTGACAGCTCTAAAGCCAGGTGAAGATCGTGCCATTCTCCTGGGACTCGGAATGATCCTCTCTTCAGTCATGATGTACTTTGTCCTGGGGATCACTATATTACGCTCCTATGCAGACAGTGTGTGGACagaggagggtgtgtgtgttgtactcaACTCCACGGTCACAGCAGACATGAACTGTTCCTACAACTGTGGGTCAGACTGCTGGAGAGTCTCCAAATACCCGTGTCTGCAGGTCTACGTGAGCGTCAATAACACGGGCCGGGTCAGCCGTTTATCTCACAATGAGGAGACCCAGGACATCAGCTCTGAATGTTTCTACGTGCCCAGGTGCCAGAAAGACAGTGTGGCCATGCACGTCATGATTATGAACATCTCCGAGCATCTGAAGGTGAACCAGAAGGTCCCCTGTTACTACGACCCCAGCGAGCAGCAGGAGATGGTTCTTCTGACACGGCTGTACGACCACAGTGTCGTCTTCCACTCGCTGCTCTGGCCCTCCTGCATGCTAATGGGAGGGGCCCTCATCATCGTGATGGTGAAGCTCACGCAGTACCTCTCCAGGCTGTGTGAAGAGTTAGGGAAGATCAAGAGGTGAAACACGTGCAGCAAGCATACGGTCGTTTGGTGATGGACATATGACATGAAAAGGATAGTTTGAAACAAATTACCTTGCTGTGACTTTTTGCAAACATTCTTCTTCTGCTGAGACATTTGGAACAGGCGACTTTGTCTCCAGATGGAGGATGTGACTATTTGTAAAAGTGAACTGAATGTTCCAGGGCAGAAACTGTCAGACATGTAACTGGCATGTAA

Function

NR:

description
PREDICTED: calcium-activated potassium channel subunit beta-2-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0015269 calcium-activated potassium channel activity molecular_function

KEGG:

id description
K04938 KCNMB2; potassium large conductance calcium-activated channel subfamily M beta member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816037.1 True 978 mRNA 0.49 4 15329264 15330964

Neighbor

gene id symbol gene type direction distance location
LOC120568471 LOC103359773,LOC101067191 coding downstream 1202 15311382 ~ 15328062 (-)
LOC120568939 LOC104921307,LOC103368498 coding downstream 111782 15211287 ~ 15217482 (-)
LOC120568937 fyttd1,LOC102800050 coding downstream 130035 15194894 ~ 15199229 (-)
LOC120568091 NA coding downstream 169490 15152126 ~ 15159774 (-)
LOC120568089 NA coding downstream 182534 15137827 ~ 15146730 (-)
eif4a2 eif4a2 coding upstream 78540 15409504 ~ 15414489 (-)
LOC120569139 NA coding upstream 80198 15411162 ~ 15411347 (-)
LOC120569141 NA coding upstream 80699 15411663 ~ 15411840 (-)
LOC120569142 NA coding upstream 81429 15412393 ~ 15412467 (-)
LOC120569143 NA coding upstream 82022 15412986 ~ 15413059 (-)
G114836 NA non-coding downstream 63040 15264520 ~ 15266224 (-)
G114752 NA non-coding downstream 247284 15076141 ~ 15081980 (-)
G114733 NA non-coding downstream 326219 15001144 ~ 15003045 (-)
LOC120568695 NA non-coding downstream 370861 14954578 ~ 14958403 (-)
LOC120569096 NA non-coding downstream 546792 14780276 ~ 14782472 (-)
LOC120568803 NA non-coding upstream 56514 15387478 ~ 15393259 (-)
G114883 NA non-coding upstream 76413 15407377 ~ 15407627 (-)
G115017 rps8 non-coding upstream 390055 15721019 ~ 15727229 (-)
G115041 NA non-coding upstream 404090 15735054 ~ 15735281 (-)
G115042 NA non-coding upstream 404516 15735480 ~ 15735895 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other downstream 24654 15290082 ~ 15304610 (-)
G114680 NA other downstream 532220 14795918 ~ 14797044 (-)
LOC120568687 NA other downstream 711040 14613613 ~ 14618224 (-)
tfr1a NA other downstream 1360453 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 1847039 13469531 ~ 13482225 (-)
G115164 btf3l4 other upstream 813196 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 851690 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 986454 16317418 ~ 16327426 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other upstream 999988 16330952 ~ 16335956 (-)
G115312 ralbp1,LOC102778314 other upstream 1306144 16637108 ~ 16639812 (-)

Expression


Co-expression Network