wdr33 (wdr33)


Basic Information

Item Value
gene id wdr33
gene name wdr33
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1152120 ~ 1200581 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816050.1
TGTCTCCAGTGGACCCCTGAAGGCAGACGTCTGGTCACCGGGGCCTCCAGCGGAGAGTTCACGCTGTGGAACGGACTCACCTTCAACTTTGAGACCATTTTACAGGCCCACGACAGTCCGGTCCGGGCGATGACCTGGTCTCACAACGACATGTGGATGCTGACGGCGGACCACGGGGGCTACGTGAAGTACTGGCAGTCCAACATGAACAACGTCAAGATGTTCCAGGCTCACAAGGAGGCCATTAGAGAAGCCAGTTTTTCTCCGACAGATAATAAATTTGCCACCTGCTCAGACGACGGCACGGTTCGGATCTGGGACTTCCTGCGCTGCCACGAGGAGAGGATCCTCAGAGgtcacGGTGCAGATGTGAAGTGTGTGGACTGGCATCCCACTAAAGGTCTGGTGGTCTCCGGCAGTAAGGACAGCCAGCAGCCAATCAAATTCTGGGACCCAAAGACGGGACAGAGTCTGGCCACACTACACGCCCACAAGAACACGGTGATGGAGGTGAAGTGGAACCTGAACGGGAACTGGCTGCTGACCGCGTCACGTGACCACCTGTGCAAACTGTTTGACATCAGGAACCTGAAGGaggagctgcaggtgttcagagGACACAAGAAGGAGGCCACAGctgtAGCCTGGCATCCGGTCCATGAAGGCCTGTTTGCCAGCGGCGGCTCTGACGGCTCTCTGCTCTTCTGGCACACCGGggtGGAGAAGGAGGTGGGGGGGATGGAGATGGCCCATGAGGGGATGATCTGGAGTCTGGCCTGGCACCCGCTGGGTCACATCCTCTGCTCCGGCTCCAACGACCACACCAGTAAGTTCTGGACCAGGAACCGGCCCGGTGATAAGATGAGAGACCGCTACAACCTGAACCTGCTGCCGGGCATGTCAGAGGACGGCATGGAGTAcgacgACATGGACCTGAACAGCGTGGCGTCCATCCCCGGCATGGGGATCCCCGAGCAGCTGAAGGCCGCCATGGAGCAGGAGCAGAGCAGTAAAGAGGCGGCTCCGGAGGTGGAGATGTCCATCCCGGGTCTGGACTGGGGCATGGACGAGGTCATGGGTAAAGACACCAAGAAGGTCCCGCAGAAGAAAGTCCCGTACGCCAAACCCATCCCAGCGCAGTTCCAGCAGGCCTGGGCGGAGAACAAAGTTCCCATGATGCCTCCCGGTGGAGAACTGTCCAAAGACCGGAAGGTGGAGCAGAAGGTGGACGGGAAGAAGAAAACTCAGGCCGAGATGGAGCAGGAGATGGCAGCTCTACAGTACACCAACCCCATGCTGCTGGAGCAAATGAAGATGAACCAGATGAACTCAGACGGGAACATGGGCCCCCCACAGGGTCAAGGCCCTATGCCCCCCTTCTCTGGCCCTGGAGGTCCTGGGGGCCCCATGCCTCCTGGCCAGCAGGGCTTTCCCCCAAACATGCCTCCTCAGCAGATGCCCAATAACATGGGGCCTCCAATGGGCCCCGGAGGCATGCAGCCTCCTTTCATGCCCCCTGGACAACACAGTGGACAGATGGGGCCCCCTTCTGGACCCCAGCCTCACCAGGGGCCCCCTCAGGGCATGATGGGACCACCGGACATGCAAGGACCCCAAGGTATGCAGAGACACCCTGGCCCGCCCAGAAATATGGGCCCACAAGGGCCGCACGGTATGGGACCCAGAGGGATGCCCCATGGGAACATGATGGGCCCCCCTCCTCGAGGAATGGGTCCCAGGGATCCTCAGGGGCCCCCACCTCAGGGCGGCATGATGCCGCCTCAGGGGAACATGATGGGCCCCCAGGGCGGGATGATGGGGCCCCCACCCAGGACACACGGCAACGCGCCGAACAACTATGGGATGGGGCCTCCTGGTAACATGCACGGGCCTCCTGGTAACATGCAGGGGCCCCCTGGTAACATGCAGGGGCCCCATGGAAACATGCAAGGACCCCCAGGCAATATACAAGGACCCCATGGAAACATGCAGGGACCTCCAGGAAACATGCAGGGACCCCCATACATGCAGCACCAGGGTCCGAACTCGGGGCCTATGATGCACGGGATGGGGCAGCAGGGGCCCAACGGCAAAGACCCTCGGGGGCCACCACCAAACCACCACATGGGCCCTCCGGACCGGCAGGGTCCCGGTGGGCCAGACCAGGGCTCGGGTCCCTACTGGGGGGACAACCAGCAGGGCCGACGAGGCCCGCAGGACTTTGACGGAGGCCAGGACTTCCACAGCCGAGGGGAGGAGGGCTGGAGACCTGGACCGGGACCTGGACCTGGATACCAGGGCGGAGGAGGGGGGGGACACAGGGGGGGAGGGCCCCGAGGAGGGGGGGGCAACGGAGGGAACTGGGGCCCCGACGAGAGGTTCACCGGCGGAGAGTTCAGAGGACGCAGAGACGACAGGTTCAGAGGCGGTCCCGGCCGGCCCGACCTCCATTCCCCCACTGGTGTTCCCCCCCCATTCCCCCCTGCTGCTTTGGTGTTCCCCCGGCACTGGTGTTCCCCCCCTTTCCCCACTGGTGTTCCCGtctcatttccccctgctctgcggTGTTTCCCTCTCTTCCTGtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgctctgctacgtttccccctctcattcatTGAGCAGACTCTTATTGTGGCGGTTGTCTCCTTCCTGTCTGCAGGTCACGATGGTTATCGGGACGGCCAGATGCATGATGGGTCGTCTGCGGCGGGCCGCGAGCGCCCGTCCTCCCTGCAGGGGATGGACATGGCGTCTCTGCCGCCACGGAAACGCCCGTGGCAGGACGGGCCCGGGACCGGAGACCCCCGAGAGAGAGAGGCCCCCGCAGCCGACGGAGGTTACCCCCCCCAGAGGGAGGACGGGGGCTACGGTCCGCCTGTTCGAGGCGGGCGGGGGGGCTGGGGTCCTGGAGGACCGGGACCAAGGCGGGGTGGACCGGCGCCTAGGGGACCACCCAGGGGGGGCGTCCGGGGCCGGTAGTCCCGAAGAACCAAACTCCCATGATCCTCCTCTTCGAGTCCAGACCCTGAGACAAACTTTTGGTCCCGTCAGATCTCTGCTGCTGCGACGAACGCTGGCTTCTGATTGGTCCGTACGTACGGACAGGAAGCAGTCACCGGAGGCGACAGGAAGCGGAGatgattttaatgtaaaatattgTAGAGAATCGTCAGCCGTCTCTTTTATTTCGGAGTCACCTGTGTGTCGTCTTGTTGCTTTTTTGTAAAagatttctatgtttttgtgttttcaccGAGGTGAAAAATAAAGATTCACACACATCGA

Function

symbol description
wdr33 Predicted to be involved in mRNA polyadenylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of mRNA cleavage and polyadenylation specificity factor complex. Orthologous to human WDR33 (WD repeat domain 33).

NR:

description
pre-mRNA 3' end processing protein WDR33 isoform X5

GO: NA

KEGG:

id description
K15542 PFS2; polyadenylation factor subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816050.1 True 3315 mRNA 0.62 18 1152120 1200581

Neighbor

gene id symbol gene type direction distance location
LOC120568483 NA coding upstream 88721 1040826 ~ 1063399 (+)
LOC120567933 LOC106676760 coding upstream 112812 1035370 ~ 1039308 (+)
LOC120567938 NA coding upstream 125296 1023627 ~ 1026824 (+)
LOC120567936 NA coding upstream 153905 993359 ~ 998215 (+)
LOC120567931 NA coding upstream 216940 917128 ~ 935180 (+)
si:ch1073-184j22.2 LOC101068556,LOC108228226,LOC105923021 coding downstream 7587 1208168 ~ 1214476 (+)
pex5lb LOC102798103,LOC101487249 coding downstream 25469 1226050 ~ 1287799 (+)
LOC120567879 NA coding downstream 243582 1444163 ~ 1444665 (+)
LOC120567883 NA coding downstream 249808 1450389 ~ 1459918 (+)
LOC120567882 NA coding downstream 263521 1464102 ~ 1464596 (+)
G111012 NA non-coding upstream 91373 1060314 ~ 1060747 (+)
G111041 NA non-coding upstream 101758 1049919 ~ 1050362 (+)
G111040 NA non-coding upstream 107958 1043518 ~ 1044162 (+)
G111034 NA non-coding upstream 119744 1031000 ~ 1032376 (+)
G111030 NA non-coding upstream 127618 1024074 ~ 1024502 (+)
G111060 NA non-coding downstream 5208 1205789 ~ 1206506 (+)
G111074 NA non-coding downstream 30228 1230809 ~ 1231575 (+)
G111092 NA non-coding downstream 183359 1383940 ~ 1384169 (+)
G111093 NA non-coding downstream 184623 1385204 ~ 1385497 (+)
G111096 NA non-coding downstream 190699 1391280 ~ 1391674 (+)
cdyl cdyl other upstream 59357 1020863 ~ 1092763 (+)
si:dkey-154p10.3 NA other upstream 149566 982515 ~ 1002554 (+)
dnajc1 dnajc1,LOC106533614 other upstream 395622 737805 ~ 756498 (+)
G110789 NA other upstream 536124 612113 ~ 615996 (+)
G110768 NA other upstream 626969 523450 ~ 525151 (+)
G111076 NA other downstream 42068 1242649 ~ 1336191 (+)
si:ch1073-184j22.1 LOC103374727,LOC102078966,LOC107100356,LOC101466520,LOC102199261 other downstream 121633 1322214 ~ 1342351 (+)
G111106 NA other downstream 240072 1440653 ~ 1441147 (+)
LOC120568494 NA other downstream 251293 1451874 ~ 1683286 (+)
G111112 NA other downstream 304028 1504609 ~ 1505015 (+)

Expression


Co-expression Network