asic1c (asic3)


Basic Information

Item Value
gene id asic1c
gene name asic3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 21303361 ~ 21322484 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816080.1
TTTTCAAAGTGATTACCTCTGGGAGTGAAGCCGTCGCTTACATCTGCAATTATCACGTGCATTTATCTATTGATGAAGGACTGGCGATGGTtacgcttgatggtttttgttaATGGAGTGATTCAGCTGTTTTTCTCATAAATGAATCATTATGTAAATCAATTGTACCTCCCCCAAGGAgctcagtttctttttttttttaatctttctgGCAAATAATTATCAAGCCTGAACAGTGGGACAGCTGCACATTAGGACTCTAGTCGCTGCTACCTGGAATCTCTGGTACATAAAcctggagatggttgtggagaAAGTCAGTGTGTGAATTGGGCATGTCTAGGGTGGGCTACTAAGAAACCGCATTTGGTAAAGAAGCGCCTGCCTTGACACAGGCAATTATGTTTGAAGCACCCACATCCGGAGCAGTCGCCCTGGAGCCACACAAAGACAATGATGCCCAAGAGACTTGTCTCCAAAACACTGAGTCCAGCTCGCTTAAACCAACATTAAAAGAGATGATGGTGGATTTCATAATGAGGCTCAAGATCCATGGTGTGAAGTATGTCTTCTCTTCGGACAAGTCTAAACTGCAGCGAGTCATCTGGATCATGGCCTTCTTCGTTTGTGTCAGTCTCCTGTGCACCTGGTCCTGGAATCGAATCATCTACCTGCTGTCCTACCCTGCCGTCACGAAGATCTACGTGGTATGGGCTCACAACATGTCCTTCCCAGCTGTTACTTTCtgcaataaaaatgtgttccGGGTATCCTCTCTGACCAAGGATGACCTGTATCACAGCGGCTACTGGATGGACCTCATGTATCCTAATCACACAGTGATGGAGAGGAGCCTGTCTATCATTAAGGACAGCCACAAGCAGGGTCTCCTGAGCCTGCTGGACTTTGACAACTACACCCCACCCCCTGATTACAGCATCAACACCACCGAGATGATGGGACGCCTCGGCCACCAGTTGGAGGACATGCTGCTGGTGTGCAGGTTCCGAGGGGAAACCTGCACCTACAAAAGCTTCAGCACTatttacacacgCTACGGAAAATGCTACACATTCAACTCTGGATTAGACGGCAACCCTTTGTTGACCACGTTAAAAGGTGGCACAGGGAACGGCTTGGAGATCATGTTGGATATTCAGCAGGATGAATATCTGCCTGTTTGGGGAGAGACAGATGAAACCTCCTACGAAGCAGGCATCAAGGTTCAGATCCACAGCCAGGACGAGCCGCCCTTCATTGACCAACTGGGATTTGGTGTGGCCCCTGGTTTTCAAACTTTTGTGTCATGTCAGCAGCAACTGCTTCAGTACCTCCCTCCGCCTTGGGGAGATTGCAAGTCTACTCCCATAGACTCTGAATACTTCTCGACGTACAGCATCACCGCCTGCCGCATTGACTGTGAAACCCGGTACCTGCTGGAGAACTGCAACTGCAGGATGGTTCACATGCCTGGGACCTCAACAGTTTGCACACCTGAGCAGTACAAAGACTGTGCTGACCCAGCTTTAGACTTTTTGGTAGAGAAAGACAACGATTACTGTGTCTGTAAGACCCCCTGCAACATGACTCGCTATGGCAAGGAGCTGTCCATGGTTAAGATCCCCAGTAAGGCATCTGCTAAGTATCTGGCTAAGAAAttcaacaaaactgagcaaTATATTGGGGAAAATATATTGGTCATGGACATCTTCTTTGAAGCTCTGAATTATGAGAAGATTGAGCAGAAGAAGGCCTATGAAATTGCAGGGCTTCTCGGTGACATTGGAGGTCAGATGGGGCTGTTTATCGGAGCCAGTGTCTTAACAATACTCGAAATATTTGACTACCTATATGAGGTGATTAAGGATAAGGTTTTGGGCTACTTCATACGCAAGAAACGACCACAGCGTTGTCAGAGCGACAATCTGGAGTTTCCAGAGAACCCAACCAGCCCTGGTGTCACGCCTAATCATGCCCCCAGAGCACCTGTGACACCCTCCGGAGTCACTCGGACAGTCTCGGATTCACGCCGAACATGTTACCTCGTCACCCGACTCTAGGCAACTTTGAAGAGTTTGCTTGTTGACAACATAAAGTAGGGGTTGGGGGTGGGGTGGCACATCTGGGGACTTGACGGCAAACTGTGAAATAATTAATGTATTTAACGGTTGAGTGTATAACTCAAAAACATATACATGTAATAGAGTTTATCAATGCCTGAATAGAAATAGAGTACtatcatcagaaaaaaagagaccacTTCCAAAACAGAACTCAGGTTTAACTGCCATGTCAAGGCATCAGTGTTAATTTATTCATGTTTCATTTCGtggatttgtttttcttatGCAGTCATTTTAGAGTTATACAATCAGTGATGAGAAATGGGtccaaaaaaggctttctgaccTGTGATGAGATGTAGTACTGTTGTGCAGGTTTTGCTGTACatcaattaaaagaaaaaaagaaaaaaaagagaatacaTGTGGATTGGTATGTGTAGCATTGCAGTTTCTCAACAGTGTTACGTCTCCAGCATCTAACTAATGCTGTATTGAGTGACCTTATACTGTCACCAGTTTGAACAGGAGAGCCTTTTCAGAAATCTACTTGACTTCAATAAGCCGATTGTTGGATAAAAGAGCTGCTCATACCTGAATCAAAACACTAGACTGGTGTTTAATGTTGCCTTTTGCTGCTGTGAGGCTTTGGATTGTCTCATAAATTAGACGACTGTGctaaatcaatttaaaaacgGAAAAGGAACTTAATTTTTTGGATATATGCAAGTATCTAGTTTTGATTTACGTGGATGGCGGTAACCGCTGAATTGGATGGGTTTGTTAACTTAAGTCACTTTTTACACACAGTAAGGGtaaaaaaggccaaaaaaggCTGTTGATTGTATCTTTATTTAGCTGACGTGTCAATCTTCATTGTTTTCCCATTTTGTGGAATAGTGTTGCTGTGCTGACTGTCACAAAAAAATGCTAGCATGCAGCTTGCTGCAGAAATtctcctttatttatttacattgaaTTCACTAGAAGAGGAACAATCAGGTTTTcctttttgcctttttaataATTCTCAATTCTTTTTTCATTACTGTGTCTTAAAGGTGTTCATCAGCACAATCCCCTGTGATAGTAATCTATTCTCTATTGAACATACGTAGACTTTAAAAGGCTTGTTGGTGACATTCCTAGACTTGAGAGAAATttgtaaatacaaataaaatcaaATGCCATTAAGAAATTCTATACTGCTCGTGTGAGACATTTGTCAAAAATATATGtatcaatatatcgatatatatatatagagagagagataagtgTTTTTTCATCTGTTCTTACACCAAAAGGAATTTGGATTTTCTATCTGGGTGGGCCGTAAGTGTCTTTGAGTTTCTGGTGATTACAGTATAATGTGACTGACAACTAAATAGACTTTATTAGATACAAGAGAATTGCCTCAAAACATCAAAACCACCACGCACCTCAGCCCCATTCAGTTCAAATGATTTATGACAGAAATGCATTGTACAATTTTACCATTGTatccttttattattattccagaAGATGTAATAAGTCACAAATAACAGTTTGTGATGTATAAATGATTAAGTATAATAAACTCTATATTTACCCATCTTA
>XM_039816081.1
TTTTCAAAGTGATTACCTCTGGGAGTGAAGCCGTCGCTTACATCTGCAATTATCACGTGCATTTATCTATTGATGAAGGACTGGCGATGGTtacgcttgatggtttttgttaATGGAGTGATTCAGCTGTTTTTCTCATAAATGAATCATTATGTAAATCAATTGTACCTCCCCCAAGGAgctcagtttctttttttttttaatctttctgGCAAATAATTATCAAGCCTGAACAGTGGGACAGCTGCACATTAGGACTCTAGTCGCTGCTACCTGGAATCTCTGGTACATAAAcctggagatggttgtggagaAAGTCAGTGTGTGAATTGGGCATGTCTAGGGTGGGCTACTAAGAAACCGCATTTGGTAAAGAAGCGCCTGCCTTGACACAGGCAATTATGTTTGAAGCACCCACATCCGGAGCAGTCGCCCTGGAGCCACACAAAGACAATGATGCCCAAGAGACTTGTCTCCAAAACACTGAGTCCAGCTCGCTTAAACCAACATTAAAAGAGATGATGGTGGATTTCATAATGAGGCTCAAGATCCATGGTGTGAAGTATGTCTTCTCTTCGGACAAGTCTAAACTGCAGCGAGTCATCTGGATCATGGCCTTCTTCGTTTGTGTCAGTCTCCTGTGCACCTGGTCCTGGAATCGAATCATCTACCTGCTGTCCTACCCTGCCGTCACGAAGATCTACGTGGTATGGGCTCACAACATGTCCTTCCCAGCTGTTACTTTCtgcaataaaaatgtgttccGGGTATCCTCTCTGACCAAGGATGACCTGTATCACAGCGGCTACTGGATGGACCTCATGTATCCTAATCACACAGTGATGGAGAGGAGCCTGTCTATCATTAAGGACAGCCACAAGCAGGGTCTCCTGAGCCTGCTGGACTTTGACAACTACACCCCACCCCCTGATTACAGCATCAACACCACCGAGATGATGGGACGCCTCGGCCACCAGTTGGAGGACATGCTGCTGGTGTGCAGGTTCCGAGGGGAAACCTGCACCTACAAAAGCTTCAGCACTatttacacacgCTACGGAAAATGCTACACATTCAACTCTGGATTAGACGGCAACCCTTTGTTGACCACGTTAAAAGGTGGCACAGGGAACGGCTTGGAGATCATGTTGGATATTCAGCAGGATGAATATCTGCCTGTTTGGGGAGAGACAGATGAAACCTCCTACGAAGCAGGCATCAAGGTTCAGATCCACAGCCAGGACGAGCCGCCCTTCATTGACCAACTGGGATTTGGTGTGGCCCCTGGTTTTCAAACTTTTGTGTCATGTCAGCAGCAACTGCTTCAGTACCTCCCTCCGCCTTGGGGAGATTGCAAGTCTACTCCCATAGACTCTGAATACTTCTCGACGTACAGCATCACCGCCTGCCGCATTGACTGTGAAACCCGGTACCTGCTGGAGAACTGCAACTGCAGGATGGTTCACATGCCTGGGACCTCAACAGTTTGCACACCTGAGCAGTACAAAGACTGTGCTGACCCAGCTTTAGACTTTTTGGTAGAGAAAGACAACGATTACTGTGTCTGTAAGACCCCCTGCAACATGACTCGCTATGGCAAGGAGCTGTCCATGGTTAAGATCCCCAGTAAGGCATCTGCTAAGTATCTGGCTAAGAAAttcaacaaaactgagcaaTATATTGGGGAAAATATATTGGTCATGGACATCTTCTTTGAAGCTCTGAATTATGAGAAGATTGAGCAGAAGAAGGCCTATGAAATTGCAGGGCTTCTCGGTGACATTGGAGGTCAGATGGGGCTGTTTATCGGAGCCAGTGTCTTAACAATACTCGAAATATTTGACTACCTATATGAGGTGATTAAGGATAAGGTTTTGGGCTACTTCATACGCAAGAAACGACCACAGCGTTGTCAGAGCGACAATCTGAGCACCTGTGACACCCTCCGGAGTCACTCGGACAGTCTCGGATTCACGCCGAACATGTTACCTCGTCACCCGACTCTAGGCAACTTTGAAGAGTTTGCTTGTTGACAACATAAAGTAGGGGTTGGGGGTGGGGTGGCACATCTGGGGACTTGACGGCAAACTGTGAAATAATTAATGTATTTAACGGTTGAGTGTATAACTCAAAAACATATACATGTAATAGAGTTTATCAATGCCTGAATAGAAATAGAGTACtatcatcagaaaaaaagagaccacTTCCAAAACAGAACTCAGGTTTAACTGCCATGTCAAGGCATCAGTGTTAATTTATTCATGTTTCATTTCGtggatttgtttttcttatGCAGTCATTTTAGAGTTATACAATCAGTGATGAGAAATGGGtccaaaaaaggctttctgaccTGTGATGAGATGTAGTACTGTTGTGCAGGTTTTGCTGTACatcaattaaaagaaaaaaagaaaaaaaagagaatacaTGTGGATTGGTATGTGTAGCATTGCAGTTTCTCAACAGTGTTACGTCTCCAGCATCTAACTAATGCTGTATTGAGTGACCTTATACTGTCACCAGTTTGAACAGGAGAGCCTTTTCAGAAATCTACTTGACTTCAATAAGCCGATTGTTGGATAAAAGAGCTGCTCATACCTGAATCAAAACACTAGACTGGTGTTTAATGTTGCCTTTTGCTGCTGTGAGGCTTTGGATTGTCTCATAAATTAGACGACTGTGctaaatcaatttaaaaacgGAAAAGGAACTTAATTTTTTGGATATATGCAAGTATCTAGTTTTGATTTACGTGGATGGCGGTAACCGCTGAATTGGATGGGTTTGTTAACTTAAGTCACTTTTTACACACAGTAAGGGtaaaaaaggccaaaaaaggCTGTTGATTGTATCTTTATTTAGCTGACGTGTCAATCTTCATTGTTTTCCCATTTTGTGGAATAGTGTTGCTGTGCTGACTGTCACAAAAAAATGCTAGCATGCAGCTTGCTGCAGAAATtctcctttatttatttacattgaaTTCACTAGAAGAGGAACAATCAGGTTTTcctttttgcctttttaataATTCTCAATTCTTTTTTCATTACTGTGTCTTAAAGGTGTTCATCAGCACAATCCCCTGTGATAGTAATCTATTCTCTATTGAACATACGTAGACTTTAAAAGGCTTGTTGGTGACATTCCTAGACTTGAGAGAAATttgtaaatacaaataaaatcaaATGCCATTAAGAAATTCTATACTGCTCGTGTGAGACATTTGTCAAAAATATATGtatcaatatatcgatatatatatatagagagagagataagtgTTTTTTCATCTGTTCTTACACCAAAAGGAATTTGGATTTTCTATCTGGGTGGGCCGTAAGTGTCTTTGAGTTTCTGGTGATTACAGTATAATGTGACTGACAACTAAATAGACTTTATTAGATACAAGAGAATTGCCTCAAAACATCAAAACCACCACGCACCTCAGCCCCATTCAGTTCAAATGATTTATGACAGAAATGCATTGTACAATTTTACCATTGTatccttttattattattccagaAGATGTAATAAGTCACAAATAACAGTTTGTGATGTATAAATGATTAAGTATAATAAACTCTATATTTACCCATCTTA

Function

symbol description
asic3 Predicted to enable acid-sensing ion channel activity. Involved in sensory perception of sour taste. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane.

NR:

description
acid-sensing ion channel 1C-like isoform X2

GO:

id name namespace
GO:0035725 sodium ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015280 ligand-gated sodium channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816080.1 True 3665 mRNA 0.42 11 21303361 21322484
XM_039816081.1 False 3612 mRNA 0.42 10 21303361 21322484

Neighbor

gene id symbol gene type direction distance location
atg9b atg9b coding downstream 18422 21273384 ~ 21284939 (-)
LOC120568841 NA coding downstream 34985 21213666 ~ 21268376 (-)
c11h1orf35 LOC104963886,LOC103374549 coding downstream 101734 21197293 ~ 21201627 (-)
wnt9a wnt9a,LOC106599874 coding downstream 152175 21133002 ~ 21151186 (-)
jmjd4 jmjd4,LOC102786139 coding downstream 249585 21051339 ~ 21053776 (-)
agap3 agap3,LOC102197517 coding upstream 126953 21449437 ~ 21571620 (-)
sntg1 sntg1 coding upstream 344255 21666739 ~ 21704105 (-)
ube2v2 ube2v2,ub2v2 coding upstream 444637 21767121 ~ 21783891 (-)
mcm4 mcm4 coding upstream 462815 21785299 ~ 21794603 (-)
spidr NA coding upstream 476472 21798956 ~ 21833615 (-)
G116692 NA non-coding downstream 3279 21297415 ~ 21300082 (-)
G116651 NA non-coding downstream 93588 21208742 ~ 21209773 (-)
G116582 NA non-coding downstream 195643 21107514 ~ 21107718 (-)
G116580 NA non-coding downstream 242121 21058592 ~ 21061240 (-)
G116525 NA non-coding downstream 383645 20918969 ~ 20919716 (-)
G116743 NA non-coding upstream 270255 21592739 ~ 21595306 (-)
G116758 pcmtd1 non-coding upstream 336195 21658679 ~ 21660467 (-)
G116832 NA non-coding upstream 488378 21810862 ~ 21811146 (-)
G116893 LOC104955993 non-coding upstream 675310 21997794 ~ 22002858 (-)
G116922 NA non-coding upstream 855809 22178293 ~ 22178534 (-)
higd1a higd1a other downstream 292785 21008048 ~ 21010576 (-)
tmie tmie,LOC102776014 other downstream 307794 20984801 ~ 20995567 (-)
xcr1b.1 NA other downstream 1507602 19793342 ~ 19795759 (-)
G116138 NA other downstream 1837981 19464700 ~ 19465380 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 2080635 19221791 ~ 19222726 (-)
G116969 NA other upstream 939514 22261998 ~ 22268559 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 2023234 23345718 ~ 23361580 (-)
G117259 vps4b other upstream 2107882 23430366 ~ 23430992 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other upstream 2146136 23468620 ~ 23491612 (-)
LOC120568990 LOC101487892,LOC104941256 other upstream 2528589 23851073 ~ 23856621 (-)

Expression


Co-expression Network