zgc:92591 (LOC103479695,LOC101468538,LOC101063387,LOC100696317,LOC105935710,LOC106963471,LOC103358166)


Basic Information

Item Value
gene id zgc:92591
gene name LOC103479695,LOC101468538,LOC101063387,LOC100696317,LOC105935710,LOC106963471,LOC103358166
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 21428019 ~ 21428679 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816082.1
CCTTGAGCCAGAGAAAGAGGATACTTATTCCTAAAGTACTTGATAGAGCGTTTGACGTAGCCTACGTAATATTGTCAAAGTTAATAGTTGACATAGTTTGAAGAATGACGAATGATATATCGAAAAAGAAGGGGAAGGTTGCAGGTGAGAAAAGGGGGAAAAGAAAGGCCAAAAGAAGAGAGACTTACGCGATGTACATCTATAAAGTGTTGAAACAGGTTCATCCGGACACGGGCATTTCCAGCAGAGCCATGAGCATCATGAACTCCTTCGTGAATGACTTATTTGAAAGGATTGCCACAGAGGCGTCCCGGCTGGCTCAGTACAATAAACGCTCCACCATCACCAGCAGAGAGGTGCAAACTGCAGTGAGACTGCTGTTGCCCGGGGAGCTGGCTAAACACGCCGTGTCTGAGGGAACCAAAGCTGTCACCAAGTACACCAGCTCCAAATGAAGACTTGAACACACTCGGAAGTTGTTGTGACAAGGGTTTCAACCCTGTGCATCCGTTTTGAAACCTGGTTGATTTCaataaacgtagcaaaagaaaCCTA

Function

NR:

description
PREDICTED: late histone H2B.L4

GO:

id name namespace
GO:0006334 nucleosome assembly biological_process
GO:0000786 nucleosome cellular_component
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K11252 H2B; histone H2B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816082.1 True 555 mRNA 0.45 2 21428019 21428679

Neighbor

gene id symbol gene type direction distance location
cdk5 cdk5,LOC106599847 coding upstream 129686 21291706 ~ 21298333 (+)
abcb8 abcb8,LOC103375355,LOC102789860 coding upstream 137518 21285152 ~ 21290501 (+)
guk1a guk1,LOC107100458 coding upstream 219335 21200717 ~ 21208684 (+)
arf1 arf1 coding upstream 232262 21192298 ~ 21195757 (+)
wnt3a wnt3a coding upstream 249188 21163720 ~ 21178831 (+)
asb10 asb10 coding downstream 6288 21434967 ~ 21439933 (+)
gbx1 gbx1 coding downstream 13081 21441760 ~ 21444125 (+)
rb1cc1 rb1cc1 coding downstream 152601 21581280 ~ 21595237 (+)
st18 NA coding downstream 173373 21602052 ~ 21642496 (+)
pcmtd1 pcmtd1 coding downstream 220139 21648818 ~ 21660508 (+)
G116657 NA non-coding upstream 101756 21270751 ~ 21326263 (+)
G116616 NA non-coding upstream 183626 21243641 ~ 21244393 (+)
G116583 wnt9a non-coding upstream 294007 21129608 ~ 21134012 (+)
G116538 NA non-coding upstream 397523 21021631 ~ 21030496 (+)
G116529 NA non-coding upstream 399037 20949004 ~ 21028982 (+)
G116723 NA non-coding downstream 25651 21454330 ~ 21500394 (+)
G116746 NA non-coding downstream 185421 21614100 ~ 21662470 (+)
G116794 mapre2 non-coding downstream 405787 21834466 ~ 21838752 (+)
G116857 NA non-coding downstream 506840 21935519 ~ 22020278 (+)
LOC120568180 NA non-coding downstream 596434 22025113 ~ 22036950 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 512697 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 1052386 20373227 ~ 20375633 (+)
emilin2a NA other upstream 1962638 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 2375777 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 2702572 18720365 ~ 18725447 (+)
LOC120568354 NA other downstream 442274 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 1179370 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 1212831 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 2004946 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 2164053 23592732 ~ 23685804 (+)

Expression


Co-expression Network