LOC120568530


Basic Information

Item Value
gene id LOC120568530
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3883756 ~ 3889916 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816101.1
GCCCTGGTCTGATCTCACAGCTCGTCCCTGTTTGATCTCAGCTGCATCAGAGCGCCACTTCTCCCCAGGTTCACTAGAGGAAACACCACTGAACAAAATGCTTTTCTttccagctgctgctctgtgctGTCTCTGTTCAGCTCTGGCTGCcatgacaacacagctgattcaGGATGATTTAACATTGACCAGGAAAGTTGATGGAAGAGTCTACTTCAGCTGTGAAGGCACTGAGCACTGTGACGGAAATTATGTATACTGGTACCAGAatagagacacagaaacattcaCAGCTATTgctgatattgataagagtaaTGGTGTCATAGATAAGGAGAGATACAATCATCCTCAGAAAGATGATTTCTCAGCTGTGTATAAAAGCAGCTGGAAGTTGCAGATCCTTAACGTTAGACCCGATCATTCAGCCACCTACTACTGCTCCTGTAGAAGACTGATCCCCACAGTGAGAAATGATCCCTGCAGCCTGAACAAAAACCTCCAGATGTCAAACAGTGTTTCTTACAGGAAGAGAGAGGCAGATGGAGAGTACAGACGGTACTGGATCTTTGGCTCTGGAACTAAACTGTTTGTAACAGATAAGCCAGTAGTGAAGCCCGTGGTGAGAGTGTACCCAGCAGCATCCAGAGCCCACCTGGAGGGGAGGAGCTCCCTGCTGTGTCTGGCCTCAGCCATGTTTCCTCCTCTGGTCCAGTTCtcctggaaaaaaagaaaggagaatGGTCCTCTGGAGGAGCTGCCCCCTGCTGAGGGAGAGCAGCTGGAGCTCAGAGAGTTGGGACGCACCGCCTCCATCTTGCTAATCCATCAGCAAGAGAACAGCAAATATAAATACCGCTGCGACGTCAATCATGAGTGGGGATCAGTGAAGGCCCACACAGAACAAGaGGTTTCTATTCTTCCACCATCACTTCCACCAGCAGCTTCTGTCCCGTCTCAGTACCAAGTGAAGCTGCTCTGTCTGATGTACACACAGCTGATAGTGAAGAGTCTGGTATACTGCTGTGGACTCTCTCTGCTGATGATCCTCAGAAACAAGGGACTGTCCACCAACTGCACACATGCTGACTGAATTTTCTGCTCGCCTTTTCTCGACATGAAATCTCATCAATTCATCTAATTTATCACTTTGATCAGTATTAAGAAATATCAATTATGATGTGTTGTATATTTCATCCTAAACATACTTATAGGCTACATATAATTTtgatatatataatttttttttatttgatactgattatttctactttaaattATGACTTGTATATTGATAGAAAATTAACGTGAATCAT

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816101.1 True 1316 mRNA 0.45 5 3883756 3889916

Neighbor

gene id symbol gene type direction distance location
LOC120568324 NA coding downstream 11941 3861329 ~ 3871815 (-)
LOC120568321 NA coding downstream 123089 3749457 ~ 3760667 (-)
LOC120568526 NA coding downstream 132616 3747297 ~ 3751140 (-)
LOC120568323 NA coding downstream 177586 3671550 ~ 3706170 (-)
LOC120568006 NA coding downstream 629387 3234368 ~ 3254369 (-)
proca NA coding upstream 82416 3972332 ~ 3983995 (-)
saga LOC100700585,LOC102198835,LOC102289605,LOC101471160,LOC103367699,LOC102794384 coding upstream 111525 4001441 ~ 4018262 (-)
cldn15la LOC104937175,LOC107383743,LOC108229378 coding upstream 131251 4021167 ~ 4027586 (-)
si:ch73-170d6.2 NA coding upstream 220830 4110746 ~ 4121351 (-)
slc39a6 slc39a6 coding upstream 255947 4145863 ~ 4168656 (-)
LOC120568335 NA non-coding downstream 62566 3800195 ~ 3821190 (-)
LOC120568342 NA non-coding downstream 162634 3718266 ~ 3721122 (-)
G111960 NA non-coding downstream 181956 3675497 ~ 3701800 (-)
G111997 NA non-coding upstream 78078 3967994 ~ 3969218 (-)
G112007 NA non-coding upstream 149968 4039884 ~ 4040197 (-)
LOC120567799 NA non-coding upstream 184813 4074729 ~ 4082082 (-)
G112018 LOC102799398 non-coding upstream 200592 4090508 ~ 4138931 (-)
G112019 NA non-coding upstream 202649 4092565 ~ 4140920 (-)
LOC120568325 NA other downstream 250357 3629565 ~ 3633399 (-)
LOC120568522 NA other downstream 298230 3564546 ~ 3585526 (-)
LOC120569104 NA other downstream 427222 3445400 ~ 3456534 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other downstream 511981 3314646 ~ 3371775 (-)
LOC120568005 NA other downstream 654609 3204287 ~ 3229147 (-)
G112043 NA other upstream 348186 4238102 ~ 4238670 (-)
G112046 NA other upstream 377622 4267538 ~ 4284083 (-)
G112233 NA other upstream 1774088 5664004 ~ 5668687 (-)
LOC120568546 NA other upstream 1833817 5723733 ~ 5746081 (-)
G112328 NA other upstream 1903247 5793163 ~ 5852447 (-)

Expression


Co-expression Network