LOC120568538


Basic Information

Item Value
gene id LOC120568538
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 5404453 ~ 5408621 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816108.1
AGCTCCTCCCTTTCACCGAGGATGTAAAGGACATGCACATGCACCTTGATAAGTGTAGACCTGAATACCAAAACAGCCTAAAGAAAAATCCTAATAAGAAGAACTGGTCCAAGCTTGCTAGTTTGACTCTTTGTGAAGTGATACTTTTTAATCGCAGAAGAGAAGGTGAGGTGTCAAAGATGCCACTTAGTGCATTCACCCTAAGAGACACTTCTGGAGTTCATTCAGATTTGGCAGTAGGACTGTCAGAGTTGGAGCAAAAGCTTTGCCAGCATTTTCAGCGCATTGAAATAAGAGGAAAACGAAACAGGAAAGTTCCCATCCTTCTAACACCAGACATGCTCTCCTCAATGGAGGCCTTGGTTGTACATCGGCGGGCTTGTGGAGTGCCTGATGAAAATCCCTTTTTCTTCTCCAGACCTGAAGCGGTTACTCACTTGAGGGGATCAGATGCAATCAGACAGATTGCAAGGGAATGTGGGGCCAAGCATCCTGAAACTCTGTCATCAACCAAGTTGAGAAAGCACATTTCCACACTGTCCACTGTGCTTAACTTGAAAGATAATGAGATGGACATACTTGCAAATTTTCTTGGCCATGACATCCGGGTCCATAGGCAGTACTATAGACTACCTGAAGGAACAATGCAGCTGGCTAAAGTCAGCAAAGTGCTGATTGCCCTAGAACAGGGCCGACTGTCAGACTTCAAGGGAATGAGCCTGGACCAAATCCAAATCGATCCTGAAGAGGAAGTGCCAGAGGCTATGGAAAGCGATCTCTCAGAGACAGAGGCACAAGAGTCATCTGTGAGCTCTAGGTCATCAGGCTCTTCAAGATCTAAAAAAAGACTAATGACTGATGAGTCTGATGATGACATTGCACCCACAGcATCTTCAACACCTAAGAGAAGAATGCAAGATGTTGAATCTGACAGTGATGACCCTAAAACCGGAACCTCAAGCTCCAACAGAGAACAGCAGCCCTTTGATGATCCTGGCAGTGTTGAACCTGCTACCACAGGTAACCCACAGACTGAGGCCATGACACCTGATACCCAACACGCCTTGTTTGGTCTTTACCTTTGTCACACAGAACTGCTAAACGTGCCCCTACAAACTCTTAAAGAGGTGGAACACTCCCTCAGCTCCTCCCTTTCACCGAGGATGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816108.1 True 1169 mRNA 0.46 6 5404453 5408621

Neighbor

gene id symbol gene type direction distance location
adcy8 adcy8 coding upstream 67961 5199093 ~ 5336492 (+)
oc90 NA coding upstream 516241 4837464 ~ 4888212 (+)
LOC120567839 hhla1 coding upstream 569400 4805564 ~ 4835053 (+)
kcnq3 kcnq3 coding upstream 619082 4616033 ~ 4785371 (+)
tmem71 NA coding upstream 930079 4458884 ~ 4474374 (+)
myo10 myo10 coding downstream 93062 5501683 ~ 5668717 (+)
rnf182 NA coding downstream 508528 5917149 ~ 5924931 (+)
ranbp9 ranbp9 coding downstream 528688 5937309 ~ 5971411 (+)
LOC120568054 NA coding downstream 622332 6030953 ~ 6053260 (+)
LOC120568059 NA coding downstream 647137 6055758 ~ 6057484 (+)
LOC120567662 NA non-coding upstream 2637 5397609 ~ 5401816 (+)
G112195 NA non-coding upstream 127392 5276791 ~ 5277061 (+)
G112193 NA non-coding upstream 167480 5236384 ~ 5236973 (+)
G112154 NA non-coding upstream 509927 4891553 ~ 4894526 (+)
G112155 NA non-coding upstream 512983 4888601 ~ 4891470 (+)
LOC120567911 NA non-coding downstream 1330 5409951 ~ 5412220 (+)
G112217 NA non-coding downstream 12410 5421031 ~ 5486593 (+)
G112237 NA non-coding downstream 290713 5699334 ~ 5699554 (+)
G112246 NA non-coding downstream 297010 5705631 ~ 5706883 (+)
G112252 NA non-coding downstream 310800 5719421 ~ 5720640 (+)
dnaaf11 NA other upstream 812106 4498994 ~ 4592347 (+)
G111910 NA other upstream 858371 4545425 ~ 4546082 (+)
tmeff1a tmeff1,LOC102775778 other upstream 1078267 4212124 ~ 4326186 (+)
G111850 LOC102799398 other upstream 1265520 4090508 ~ 4138933 (+)
G111848 NA other upstream 1266910 4088644 ~ 4137543 (+)
LOC120568547 LOC106674584,LOC106676354,LOC106675207,LOC106675343,LOC106676464,LOC106676424,LOC106675739 other downstream 379602 5788223 ~ 5789417 (+)
epdr1 epdr1,LOC104965688 other downstream 575236 5983857 ~ 5993711 (+)
LOC120568055 NA other downstream 595064 6003685 ~ 6016600 (+)
G112400 NA other downstream 842769 6251390 ~ 6321990 (+)
LOC120568552 dip2c other downstream 1166175 6574796 ~ 6682272 (+)

Expression


Co-expression Network