alg3 (alg3)


Basic Information

Item Value
gene id alg3
gene name alg3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26330224 ~ 26334321 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816116.1
TGAAAACATTGCGTGATGACGTACAACGGCGCATGTCATTGTCGGCCTCTTTCCACTCTGTCACTACACGCCGCCGAGATGGCAGGAGGTGTGCGGAAAAAGTCTCCTGGTTCCCCGTCCCCACTGTGGGGAAAACTTCACACCTTGTGGCAGGACAAACATTTGGTTCTGTTCAAGACGGAATACACGTTACTGGTCGTTTCAGTTTTGTGGTTCCTGGAGATCGGGATCAATGTGTGGGTCATACAGAAAGTAGCCTACACTGAGATCGACTGGAAAGCTTACATGGATGAAGTAGAGGGAGTCATCAATGGTACCTACGACTACACCGAGCTTAAAGGAGACACCGGCCCCTTGGTGTACCCGGCTGGCTTTGTCTACATCTTTACGGCTCTCTACTACATCACCAGCCGTGGGGTGAACATCCGTCTGGCCCAGTacctttttgctgctttttaccTCATCACACTGCTGCTCGTCTTCAGGATTTACAACCGCACTAAGAAGGTTCCTCCCTATGTGTTCTTCTTTGTGTGCTGTGCTTCTTATCGGATCCACTCCATCTTTGTGTTGCGTCTCTTTAATGATCCAGTGGCCATGATGCTGCTGTTTGCAGCTGTCAACCTCTTCATGGATGGATCCTGGACTCTGGGCTGTGGCATTTACAGTTTAGCAGTGTCTGTGAAAATGAATGTGCTCCTTTTTGCTCCGGGACTACTTTTCCTCCTTCTGTCTGAGTTTGGTCTAATCAGGACAATCCCCAAACTTTCTCTGTGTGCGGGCATACAGCTTTTGCTGGGTCTTCCTTTCCTCCTGGAGAATCCCGTGGGTTATATAAGCCGGGCGTTTGATCTTGGCCGTCAGTTTATGTTTAAGTGGACGGTCAACTGGCGCTTCCTGCCAGAATGGTTCTTCTTGAATCGGTACTTCCACTTACTCCTGCTGGCTGCCCACCTGCTCACCCTGCTGCTCTTTGCTCTCCGCCGTTGGAAGAGGCCAGGAGAAAGCATCTTCGAACTCCTCAAGGAGCCAAGCAAGAGGAAAACCCCTGCTCAGAAAAACACTGTTGATCAGATGGTGCTGATTCTCTTCATTTCTAACTTCATTGGCATGTGCTTCAGTCGTTCATTGCACTACCAATTCTACGTCTGGTACTTCCACACGCTGCCTTACCTGCTCTGGAGTGGAGGAGTCAAGAAGCTGGCCCACCTGCTCAGGGTCCTGATCCTGGGTCTGATCGAGCTTTCATGGAACACCTACCCTTCTACTAACAGCAGCTCAGCCGCCCTCCACGTCTGTCACCTCATCATCCTCCTGTGTCTGTGGCTGGCTCCGCCGCTGCCTTCAGCCCCAGCAGCAACACAAGAACACATACCCGTCAAGGACAAAAGCCAGTGAGCCACAGCATGATTGGACCGGACGTTGTATTTTAGTCTAATCAGCTGCCAAACAGCCTCCATCACCCACCTCTCTTTGATCCTCACAACACCGGTGCAGAGGGAGGTCACTGGGATAGACTTGTTTTTATGAGTGAATTCAAGGAGCCATTTAATGCTTCTCATCTCAGCTCACTGCTAAAAGGGAAGGAAGCTAATGTGTGTGGGTGGAGTATGCAGACAGATACCTACCTTGCAGTTGAAgcaataaaaagagaaagaaaatatgGATTCTCAGGTTATgctatttttgaaagcatttgtTACATCTTATACAGCTATATTTCTCTATTTGCCCATATTTCAACTGGCCTAATAATTTTCCCTTGCTTGATATTGATATTTTCAAAAACGAATTTATTGGTGCACAAAGTATCTTGTACATTGTGTTAAGAAGGCAGTATATTAAGGAATATCATTAATATGATACAGAACTTGAACGCAGCACCAAAAGCTTTAAATAATTGCACATTTGGCAATTATCACTTTAATTTCCACTTGTCCAGTAGGTGCATTATTCTCCAATACAAGGCCAAATATATTTTCCAGTAGTAAGTGTAATTTTACACAAATGTGTAAAACCAAGCTGCAGACAATCATGGCTATTTTTCTGATTTGTTACATAATTCATTCATCTTCTGTTGTGAGTGGCTCAATATACTCATAAGCACAAGTTTGCAGTAGACTGAGACAGCAAAAGTGTGACATTTTATATTAAACAGAGATGCCACTTAA

Function

symbol description
alg3 Predicted to enable dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity and glucosyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to act upstream of or within protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Id. Orthologous to human ALG3 (ALG3 alpha-1,3- mannosyltransferase).

NR:

description
dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase-like isoform X1

GO: NA

KEGG:

id description
K03845 ALG3; alpha-1,3-mannosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816116.1 True 2171 mRNA 0.46 9 26330224 26334321

Neighbor

gene id symbol gene type direction distance location
yeats2 yeats2 coding upstream 135344 26166546 ~ 26194880 (+)
klhl24a klhl24 coding upstream 166712 26139661 ~ 26163512 (+)
LOC120567725 NA coding upstream 190719 26135136 ~ 26139505 (+)
mterf4 NA coding upstream 195702 26131203 ~ 26134522 (+)
pask NA coding upstream 200047 26115932 ~ 26130177 (+)
prss56 prss56,LOC102789963 coding downstream 26814 26361135 ~ 26368256 (+)
chrng chrng coding downstream 35466 26369787 ~ 26387522 (+)
LOC120568303 LOC104957792,LOC103356898 coding downstream 53359 26387680 ~ 26393785 (+)
ticam1 NA coding downstream 101429 26435750 ~ 26439450 (+)
camsap2b LOC102288635,LOC100701512,LOC103357628 coding downstream 106414 26440735 ~ 26479429 (+)
G118009 NA non-coding upstream 15594 26314265 ~ 26314630 (+)
G117938 NA non-coding upstream 121353 26208356 ~ 26208871 (+)
G117933 NA non-coding upstream 125394 26204611 ~ 26204830 (+)
G117917 NA non-coding upstream 264385 26058254 ~ 26065839 (+)
G117847 pax7,LOC106964226,LOC102296763 non-coding upstream 413502 25916500 ~ 25916722 (+)
G118095 NA non-coding downstream 197845 26532166 ~ 26601409 (+)
G118098 NA non-coding downstream 214335 26548656 ~ 26605084 (+)
G118115 NA non-coding downstream 268335 26602656 ~ 26674451 (+)
G118135 NA non-coding downstream 327961 26662282 ~ 26664844 (+)
LOC120569009 NA non-coding downstream 409420 26743741 ~ 26763260 (+)
ece2a ece2,LOC103356888 other upstream 20677 26217998 ~ 26309547 (+)
LOC120568800 NA other upstream 113183 26214432 ~ 26217041 (+)
LOC120567655 LOC103356880,LOC101482764,LOC104966182,LOC107087304 other upstream 279125 26048789 ~ 26051099 (+)
G117829 NA other upstream 499529 25829764 ~ 25830695 (+)
LOC120568895 NA other upstream 536270 25773777 ~ 25793954 (+)
G118011 eif4e2 other downstream 61105 26395426 ~ 26402078 (+)
ccl20a.3 NA other downstream 82187 26416508 ~ 26418008 (+)
wdr47a wdr47,LOC102290984 other downstream 87133 26421454 ~ 26496809 (+)
prkab2 prkab2,LOC101470867,LOC107384083,LOC102226598 other downstream 256461 26590782 ~ 26600072 (+)
G118149 NA other downstream 431171 26765492 ~ 26769911 (+)

Expression


Co-expression Network