LOC120568550 (LOC107380363,LOC107396089,LOC107391794,LOC107390451)


Basic Information

Item Value
gene id LOC120568550
gene name LOC107380363,LOC107396089,LOC107391794,LOC107390451
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6045322 ~ 6046252 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816133.1
TGTCTTGCGCAGAAATAATCTGAGGATGAAGCAGGTCTACAGGGTGCCATTTGAACGCAATTCAGAAAGAGTCAAAGAATTGCAACATAACTATGTGCAAAGAGTCCTCGAGCTAGAGGTGGCTGCAGTGGAGCACCAGTTCATCTTCATTGATGAGGTTGGATTCAACCTCACAAAAAGACGAAAGAGGGGAAGGAATATCATCGGCCAGCGTGCCATTGTTGAAGTCCCTGGCCAGCGCGGAGGGAACATCACAATGTGTGCAGCGATTACCCACCAAGGCGTCATCCATCACCATGCTACCCTTGGCCCCTACAACACTGCCCATCTGATCACATTCCTGGACACCCTACACCACACACTCATTCCACCAGATCAGGTAGATGGCCCAGAGCAGCTCAGGTATGTTGTCATTTGGGACAACGTAAGTTTCCACAGGGCTGCTCTGGTTCATAACTGGTTCACTGCCCACCCACGCTTTTTAGTCCTTTATCTCCCTCCATATTCTCCATTCCTCAATCCTATTGAGGAATTTTTTTCTGCCTGGAGATGGAAAGTATATGACAGAAATCCACAAACGCGTATACCTCTTCTCCAAGCTATGGAAGACGCATGTGGAGATATAGCAGCTGATGCTTTTCATGGCTGGAATCGCCATGCTAGGCGATATTTCCCCCGCTGCTTGGCCAGGGAAAACATTGCTTGTGACGTGGATGAGGTGCTGTGGCCAGACCGAAACAGAAGAGAGGATgcaacatag

Function

NR:

description
PREDICTED: insertion element IS630 uncharacterized 39 kDa protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816133.1 True 760 mRNA 0.49 2 6045322 6046252

Neighbor

gene id symbol gene type direction distance location
nol7 NA coding downstream 62784 5977281 ~ 5982538 (-)
LOC120568045 fam134b coding downstream 128182 5888027 ~ 5917140 (-)
LOC120568924 NA coding downstream 159905 5874452 ~ 5885417 (-)
LOC120567973 NA coding downstream 176912 5842529 ~ 5868410 (-)
LOC120567975 NA coding downstream 232960 5810326 ~ 5812362 (-)
LOC120568053 NA coding upstream 14473 6060725 ~ 6062992 (-)
LOC120568672 NA coding upstream 30899 6077151 ~ 6078837 (-)
LOC120567957 NA coding upstream 118896 6165148 ~ 6169113 (-)
LOC120567958 LOC106675582 coding upstream 129321 6175573 ~ 6178577 (-)
trnas-uga_1 NA coding upstream 154410 6200662 ~ 6200743 (-)
G112352 NA non-coding downstream 51549 5922747 ~ 5993773 (-)
G112332 NA non-coding downstream 253559 5774413 ~ 5791763 (-)
G112253 NA non-coding downstream 323352 5720657 ~ 5721970 (-)
G112245 NA non-coding downstream 340748 5704296 ~ 5704574 (-)
G112241 NA non-coding downstream 347381 5697688 ~ 5697941 (-)
G112383 NA non-coding upstream 36389 6082641 ~ 6105817 (-)
G112381 NA non-coding upstream 67210 6113462 ~ 6116144 (-)
G112453 NA non-coding upstream 301083 6347335 ~ 6347853 (-)
G112460 NA non-coding upstream 310546 6356798 ~ 6357990 (-)
G112461 NA non-coding upstream 311827 6358079 ~ 6359329 (-)
G112328 NA other downstream 192875 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 299241 5723733 ~ 5746081 (-)
G112233 NA other downstream 376635 5664004 ~ 5668687 (-)
G112046 NA other downstream 1761239 4267538 ~ 4284083 (-)
G112043 NA other downstream 1806652 4238102 ~ 4238670 (-)
LOC120567959 NA other upstream 126029 6172281 ~ 6178886 (-)
zmynd11 zmynd11 other upstream 649358 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 910188 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 1030357 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 2441215 8487467 ~ 8487539 (-)

Expression


Co-expression Network