LOC120568566


Basic Information

Item Value
gene id LOC120568566
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32524542 ~ 32538091 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816158.1
TACTCACCATGCTCTATATATACTGGTTTCATTTGAGTTGctcaaataataaagtaataagTTTAGAGACATTTCTTTTGTAGAAACAGTTCCAGTTGAAACTCTTCTCAGTGGATTGCCCAGAAAAATGTCTGAGAAGGTGCAAGCTGAGCTCAGTTCATAAATAGCCTTACCACTTCCTCATATGGTACATTTAGCAAAATGGAGCTTGTTGTACTTCTCTGTGCCGTTTctctgctgcattcatgtgaagCACAAGAGTCCAGTGCTGTGACTCCTGTGTTtgtgaagaagagagaggatGTGCTTCTGAATGTCACAATAGCTGATGATCCTAAAGACGATACTGTTATCTGGAGATTCAATAAAACAGTTAATTTAGTACGATTTTTACCTGGTAGAGGACCAAAAGTCTCTGATGATTACTCTGGAAGAATTGAGTTGCTTGAGAACTACTCTGTGAAATTGAAGAATctaacagagacagacagtggAGTTTATATTGCAGTAGTGTCTGGggataaagaaaaacaaataactgGATACAAGATTACAGTCCAAGatcCAGTGTCTCCAGTTAAACTGTCAGTGGACTCTGTGTCTAACAGCTCAGACTGGTGTAACCTGACAGTGAGCTGCAGAGCACAGGACTCTCACATTAACTCCACCTTTAGATGTGACACCCACACCAACACCTGCAGtcaggaggaaggagagagatcACAGGTCCCACCCTCTGCTGCTGATCTCAATGTCTACCTGTCCAAAGGCTCCATCATCTGTAACCATAGCAACCAGGTCAGCTGCACCAAGGACATCGAAGTAATTGAAAAATTCTGCCCCCGACATGCTGgtCGTGAACCTTCAAATGCCATCTCTGTGGGTGCTGGTATTGGCATAGgtatctctctcttcctcctatgtattgtagcagcagcagcagcagcagcatttcgTTATCATCAAAAGAGAGGACAATATAAAAGAGAGAGCATGGAGAATACAGTATATGAAGTTCCTCGGGTCGGACATACAACCTTACCTCAGAGTCCAACAGCTGAAGTTACAGGTCTTTCTCCGACCTCCACCTACAGCACGGTAGGGCCTCACACTGGACCTGTGGATTCCAGTACGACTCTGCCAGAGAGTCTGTATGCTCAGGTGGATAAACCCAGGTCCTTAAACAAGTAATCAGCATGGTATTACACATATACAATTTACAGTTTAGCTGTCTATGTTTACAGTAATGTAAGTTCATGTGACCTGCTCTGGTATTGAGAGACTCCTCCAATACAGAAACATTTCAATGGAAACAgctgtaatataatgtaatgttattagtatttttgtagtattatgttaatatgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttttaaacacCTGGACATTTAAATATCTGGGGTCAATATCTGCGCATTTCgtaattttttttcattgagCCATGTGTcattaaaaattatattttgttttata
>XM_039816159.1
TACTCACCATGCTCTATATATACTGGTTTCATTTGAGTTGctcaaataataaagtaataagTTTAGAGACATTTCTTTTGTAGAAACAGTTCCAGTTGAAACTCTTCTCAGTGGATTGCCCAGAAAAATGTCTGAGAAGGTGCAAGCTGAGCTCAGTTCATAAATAGCCTTACCACTTCCTCATATGGTACATTTAGCAAAATGGAGCTTGTTGTACTTCTCTGTGCCGTTTctctgctgcattcatgtgaagCACAAGAGTCCAGTGCTGTGACTCCTGTGTTtgtgaagaagagagaggatGTGCTTCTGAATGTCACAATAGCTGATGATCCTAAAGACGATACTGTTATCTGGAGATTCAATAAAACAGTTAATTTAGTACGATTTTTACCTGGTAGAGGACCAAAAGTCTCTGATGATTACTCTGGAAGAATTGAGTTGCTTGAGAACTACTCTGTGAAATTGAAGAATctaacagagacagacagtggAGTTTATATTGCAGTAGTGTCTGGggataaagaaaaacaaataactgGATACAAGATTACAGTCCAAGatcCAGTGTCTCCAGTTAAACTGTCAGTGGACTCTGTGTCTAACAGCTCAGACTGGTGTAACCTGACAGTGAGCTGCAGAGCACAGGACTCTCACATTAACTCCACCTTTAGATGTGACACCCACACCAACACCTGCAGtcaggaggaaggagagagatcACAGGTCCCACCCTCTGCTGCTGATCTCAATGTCTACCTGTCCAAAGGCTCCATCATCTGTAACCATAGCAACCAGGTCAGCTGCACCAAGGACATCGAAGTAATTGAAAAATTCTGCCCCCGACATGCTGgtCGTGAACCTTCAAATGCCATCTCTGTGGGTGCTGGTATTGGCATAGgtatctctctcttcctcctatgtattgtagcagcagcagcagcagcagcatttcgTTATCATCAAAAGAGAGGACAATGTCGGACATACAACCTTACCTCAGAGTCCAACAGCTGAAGTTACAGGTCTTTCTCCGACCTCCACCTACAGCACGGTAGGGCCTCACACTGGACCTGTGGATTCCAGTACGACTCTGCCAGAGAGTCTGTATGCTCAGGTGGATAAACCCAGGTCCTTAAACAAGTAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816158.1 True 1507 mRNA 0.41 6 32524542 32538091
XM_039816159.1 False 1150 mRNA 0.44 5 32524855 32538091

Neighbor

gene id symbol gene type direction distance location
LOC120568565 NA coding downstream 10560 32488817 ~ 32513982 (-)
LOC120568891 NA coding downstream 657845 31865738 ~ 31866697 (-)
kcnj9 LOC101477758 coding downstream 664464 31838382 ~ 31860078 (-)
LOC120569109 LOC104940918,LOC103370533 coding downstream 703118 31802504 ~ 31821424 (-)
LOC120568044 LOC103370525 coding downstream 725204 31714287 ~ 31799338 (-)
LOC120568564 kcnj10,LOC100694690,LOC101485288 coding upstream 106 32538197 ~ 32555689 (-)
LOC120568447 NA coding upstream 56567 32594658 ~ 32600456 (-)
LOC120568440 NA coding upstream 65052 32603143 ~ 32614898 (-)
LOC120568450 NA coding upstream 79955 32618046 ~ 32623091 (-)
si:dkeyp-68b7.12 arhgap30 coding upstream 91351 32629442 ~ 32647388 (-)
G119492 NA non-coding downstream 70494 32438827 ~ 32454048 (-)
G119479 NA non-coding downstream 104653 32403526 ~ 32419889 (-)
G119482 NA non-coding downstream 105547 32417963 ~ 32418995 (-)
LOC120568563 NA non-coding downstream 171861 32330829 ~ 32352681 (-)
G119472 NA non-coding downstream 194470 32326772 ~ 32330072 (-)
G119523 NA non-coding upstream 27881 32565972 ~ 32566391 (-)
G119528 NA non-coding upstream 31906 32569997 ~ 32570682 (-)
G119567 NA non-coding upstream 55283 32593374 ~ 32594044 (-)
G119570 NA non-coding upstream 111598 32649689 ~ 32649976 (-)
G119590 NA non-coding upstream 219119 32757210 ~ 32757652 (-)
LOC120568568 NA other downstream 150024 32364461 ~ 32374518 (-)
G119465 cadm3,LOC106600493 other downstream 298182 32216502 ~ 32226360 (-)
G119379 NA other downstream 473103 32047477 ~ 32051439 (-)
zeb1a LOC103364416,LOC100701828,LOC102292734,LOC101079552 other downstream 949349 31469595 ~ 31575193 (-)
LOC120568745 NA other downstream 1067385 31455599 ~ 31457157 (-)
fcer1gl NA other upstream 222878 32760969 ~ 32765211 (-)
LOC120567697 copa,LOC103137970 other upstream 290273 32828364 ~ 32832509 (-)
G119631 LOC104961532,LOC101466547 other upstream 311628 32849719 ~ 32865274 (-)
zgc:66427 LOC103370245 other upstream 441115 32979206 ~ 32988559 (-)
LOC120568437 NA other upstream 679099 33217190 ~ 33256937 (-)

Expression


Co-expression Network