LOC120568571


Basic Information

Item Value
gene id LOC120568571
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32437458 ~ 32441095 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816169.1
AGAGGAACGTCTAATAGAGAAGTTCATGAACATGGTAACATTCTGACAGTGTTTGTGGTTTTGATAGGAAAACTGTGACAAAGGTTTAACCCTGTAGTGTGTCTGTTAGAGCAAAACACAACCCCCACACCGTTGTGTCGTGCAGTCAGGCAGGACAACTGGACTGGACTCTGGCATGTCTATCTTTGTGATACTGGGACTGCTGGTCTGCATAGAGGCACAAGAGTCCAGTGCTGAGACTCCTGTGTTTGTGAAGAAGGGAGAGGATGTGCTTCTGAATGTCACAATGGCTGATGATCCTGAAGATGATACTGTTGCCTGGAAATTCAATAAAACAGTTAATTTAGTACGATTTTTACCTGGTATAGGACCAAAAGTCTCTGATGATTACTCTGAAAGGATTGAGTTGCTTGAGAACTACTGTGTGAAATTGAAGAATCTACAAGAGGCAGACAGTGGAGTTTATACTGCATTAGTGTTTGGggataaagaaaaacaaataactgGATACAAGGTCACAGTTCAAGATCCAGTGTCTCCAGTTAAACTGTCAGTGGACTCTGTGTCTAACAGCTCAGACTGGTGTAACCTGACAGTGAGCTGCAGAGCACAGGACTCTCACATTAACAGCACCTTTAGATGTGAGACCCACACCTGCAgtcaggagggaggagagagaccaCAGGTCACaccctctgctgctgctctccatGTCTACCTGTCCAATGGCTCCATCATCTGTACCCATAGCAACCATGTCAGCTGGAAAAAGGACACAATTAAAAATGTCTGCTCCCGACTTGCTGGTCCAGAGAGTGTCTCTgctggtgtctctgtgtgcctgcTGAAGACAGCCGTGTTGTCCGTCGGTCTGATCATCATGGTGGCTGCTGTCATCACTGTTCACCTCATGGAGAAGCTCAAGAAGCACGAATAAAAACTCCAagttaaagTAGGTGGCAGGAACACTCCAGGAAATGCACCAACAAAGGAGAGGAGGTAGAATGCTGCAAGCCAGAAAACGTGGATGCAAACAATGTaagatttaaaaatatttgaacaaaatctttggaaaatgtatttcaactacatttttaaagattaaatGATACTTTAAATGCAATTTCACAAGTATAACTGAATGTAAATATTGTTTATTtccaagaaaactccacaggcaCCTTTTAAGCAAATGCTGATGATACTAGATTATCCATTGATTATACCCAATAATCACTGTGCTCactttgtaaataaaatgattgTACAGAGATGAAGATACAAGAGCCTTGATGTAACCCTGAATGTTATTAACAATGTTTTaacaatatatatgtatgtttatatgtacacacatacagtatgttattaTATTTGTTCATCTCTGCGTGAATACAGTTTCTGCTACATGCACCATTATCCGAGattcattaaatatatactCATCTTATATTTTGTGGtgattttgtgaattcatggaAAGATCATGGCCACTGACTCCCATTTAAATACGTGAACAAAATTTGGGAAAATATGAATCCCAACACATTTGTAAAGCTTCAAGGTTTTTTACAATGCAATTTGGTGAGTACAACATCTTGTAAATATTATTTCTTTCTGAGAAAACTCTACAGGGCACCTTTATTACAAATG
>XM_039816170.1
AGAGAGGAACGTCTAATAGAGAAGTTCATGAACATGGTAACATTCTGACAGTGTTTGTGGTTTTGATAGGAAAACTGTGACAAAGGTTTAACCCTGTAGTGTGTCTGTTAGAGCAAAACACAACCCCCACACCGTTGTGTCGTGCAGTCAGGCAGGACAACTGGACTGGACTCTGGCATGTCTATCTTTGTGATACTGGGACTGCTGGTCTGCATAGAGGCACAAGAGTCCAGTGCTGAGACTCCTGTGTTTGTGAAGAAGGGAGAGGATGTGCTTCTGAATGTCACAATGGCTGATGATCCTGAAGATGATACTGTTGCCTGGAAATTCAATAAAACAGTTAATTTAGTACGATTTTTACCTGGTATAGGACCAAAAGTCTCTGATGATTACTCTGAAAGGATTGAGTTGCTTGAGAACTACTGTGTGAAATTGAAGAATCTACAAGAGGCAGACAGTGGAGTTTATACTGCATTAGTGTTTGGggataaagaaaaacaaataactgGATACAAGGTCACAGTTCAAGATCCAGTGTCTCCAGTTAAACTGTCAGTGGACTCTGTGTCTAACAGCTCAGACTGGTGTAACCTGACAGTGAGCTGCAGAGCACAGGACTCTCACATTAACAGCACCTTTAGATGTGAGACCCACACCTGCAgtcaggagggaggagagagaccaCAGGTCACaccctctgctgctgctctccatGTCTACCTGTCCAATGGCTCCATCATCTGTACCCATAGCAACCATGTCAGCTGGAAAAAGGACACAATTAAAAATGTCTGCTCCCGACTTGCTGGTCCAGAGAGTGTCTCTgctggtgtctctgtgtgcctgcTGAAGACAGCCGTGTTGTCCGTCGGTCTGATCATCATGGTGGCTGCTGTCATCACTGTTCACCTCATGGAGAAGCTCAAGAAGCACGAATAAAAACTCCAagttaaagAGGGACGTTGTACATTCCTCCCACTGATGTCATGCTGTTCCACTGATTGACAGTAGGTGGCAGGAACACTCCAGGAAATGCACCAACAAAGGAGAGGAGGTAGAATGCTGCAAGCCAGAAAACGTGGATGCAAACAATGTaagatttaaaaatatttgaacaaaatctttggaaaatgtatttcaactacatttttaaagattaaatGATACTTTAAATGCAATTTCACAAGTATAACTGAATGTAAATATTGTTTATTtccaagaaaactccacaggcaCCTTTTAAGCAAATGCTGATGATACTAGATTATCCATTGATTATACCCAATAATCACTGTGCTCactttgtaaataaaatgattgTACAGAGATGAAGATACAAGAGCCTTGATGTAACCCTGAATGTTATTAACAATGTTTTaacaatatatatgtatgtttatatgtacacacatacagtatgttattaTATTTGTTCATCTCTGCGTGAATACAGTTTCTGCTACATGCACCATTATCCGAGattcattaaatatatactCATCTTATATTTTGTGGtgattttgtgaattcatggaAAGATCATGGCCACTGACTCCCATTTAAATACGTGAACAAAATTTGGGAAAATATGAATCCCAACACATTTGTAAAGCTTCAAGGTTTTTTACAATGCAATTTGGTGAGTACAACATCTTGTAAATATTATTTCTTTCTGAGAAAACTCTACAGGGCACCTTTATTACAAATGC
>XM_039816171.1
AGAGAGGAACGTCTAATAGAGAAGTTCATGAACATGGTAACATTCTGACAGTGTTTGTGGTTTTGATAGGAAAACTGTGACAAAGGTTTAACCCTGTAGTGTGTCTGTTAGAGCAAAACACAACCCCCACACCGTTGTGTCGTGCAGTCAGGCAGGACAACTGGACTGGACTCTGGCATGTCTATCTTTGTGATACTGGGACTGCTGGTCTGCATAGAGGCACAAGAGTCCAGTGCTGAGACTCCTGTGTTTGTGAAGAAGGGAGAGGATGTGCTTCTGAATGTCACAATGGCTGATGATCCTGAAGATGATACTGTTGCCTGGAAATTCAATAAAACAGTTAATTTAGTACGATTTTTACCTGGTATAGGACCAAAAGTCTCTGATGATTACTCTGAAAGGATTGAGTTGCTTGAGAACTACTGTGTGAAATTGAAGAATCTACAAGAGGCAGACAGTGGAGTTTATACTGCATTAGTGTTTGGggataaagaaaaacaaataactgGATACAAGGTCACAGTTCAAGATCCAGTGTCTCCAGTTAAACTGTCAGTGGACTCTGTGTCTAACAGCTCAGACTGGTGTAACCTGACAGTGAGCTGCAGAGCACAGGACTCTCACATTAACAGCACCTTTAGATGTGAGACCCACACCTGCAgtcaggagggaggagagagaccaCAGGTCACaccctctgctgctgctctccatGTCTACCTGTCCAATGGCTCCATCATCTGTACCCATAGCAACCATGTCAGCTGGAAAAAGGACACAATTAAAAATGTCTGCTCCCGACTTGCTGGTCCAGAGAGTGTCTCTgctggtgtctctgtgtgcctgcTGAAGACAGCCGTGTTGTCCGTCGGTCTGATCATCATGGTGGCTGCTGTCATCACTGTTCACCTCATGGAGAAGCTCAAGAAGCACGAATAAAAACTCCAagttaaagGTGGCAGGAACACTCCAGGAAATGCACCAACAAAGGAGAGGAGGTAGAATGCTGCAAGCCAGAAAACGTGGATGCAAACAATGTaagatttaaaaatatttgaacaaaatctttggaaaatgtatttcaactacatttttaaagattaaatGATACTTTAAATGCAATTTCACAAGTATAACTGAATGTAAATATTGTTTATTtccaagaaaactccacaggcaCCTTTTAAGCAAATGCTGATGATACTAGATTATCCATTGATTATACCCAATAATCACTGTGCTCactttgtaaataaaatgattgTACAGAGATGAAGATACAAGAGCCTTGATGTAACCCTGAATGTTATTAACAATGTTTTaacaatatatatgtatgtttatatgtacacacatacagtatgttattaTATTTGTTCATCTCTGCGTGAATACAGTTTCTGCTACATGCACCATTATCCGAGattcattaaatatatactCATCTTATATTTTGTGGtgattttgtgaattcatggaAAGATCATGGCCACTGACTCCCATTTAAATACGTGAACAAAATTTGGGAAAATATGAATCCCAACACATTTGTAAAGCTTCAAGGTTTTTTACAATGCAATTTGGTGAGTACAACATCTTGTAAATATTATTTCTTTCTGAGAAAACTCTACAGGGCACCTTTATTACAAATGC

Function

GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816169.1 False 1653 mRNA 0.40 5 32437460 32441094
XM_039816170.1 True 1709 mRNA 0.40 5 32437458 32441095
XM_039816171.1 False 1653 mRNA 0.40 5 32437458 32441095

Neighbor

gene id symbol gene type direction distance location
LOC120568561 NA coding upstream 81636 32347289 ~ 32355822 (+)
kirrel1b LOC101488125,LOC102302400,LOC100705859 coding upstream 111811 32232208 ~ 32325647 (+)
trnar-ucu_14 NA coding upstream 311028 32126357 ~ 32126430 (+)
sdhc sdhc,LOC103479501 coding upstream 312960 32118953 ~ 32124498 (+)
LOC120568430 LOC103373937,LOC105937883,LOC100694151 coding upstream 321511 32075076 ~ 32115947 (+)
LOC120568570 NA coding downstream 31525 32472620 ~ 32486408 (+)
LOC120568820 LOC101162955,LOC103374738 coding downstream 134218 32575313 ~ 32586349 (+)
si:ch211-155e24.3 si:ch211-155e24.3,LOC108427093,LOC107549816,LOC107750208,LOC107671805 coding downstream 210209 32651304 ~ 32656857 (+)
LOC120568452 LOC103367094 coding downstream 275658 32716753 ~ 32721611 (+)
myadmb LOC104961532,LOC101466547 coding downstream 402004 32843099 ~ 32852397 (+)
G119417 NA non-coding upstream 33747 32372563 ~ 32403711 (+)
G119416 NA non-coding upstream 72690 32364566 ~ 32364768 (+)
G119415 NA non-coding upstream 87745 32348121 ~ 32349713 (+)
G119409 NA non-coding upstream 96095 32341125 ~ 32341363 (+)
G119398 NA non-coding upstream 312543 32124564 ~ 32124915 (+)
LOC120568573 NA non-coding downstream 63117 32504212 ~ 32505293 (+)
G119453 kcnj10 non-coding downstream 108049 32549144 ~ 32555738 (+)
G119519 NA non-coding downstream 122746 32563841 ~ 32564486 (+)
G119541 NA non-coding downstream 192533 32633628 ~ 32634719 (+)
G119556 NA non-coding downstream 268200 32709295 ~ 32710372 (+)
cadm3 cadm3 other upstream 210975 32128458 ~ 32226483 (+)
LOC120567694 LOC103373937,LOC106569580,LOC100136182,LOC107383461,LOC106960171 other upstream 366146 32067563 ~ 32071312 (+)
pip4p1a tmem55b,LOC101161334 other upstream 522754 31888908 ~ 31914704 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other upstream 567963 31865755 ~ 31869495 (+)
G119257 NA other upstream 976550 31459864 ~ 31460908 (+)
LOC120568569 NA other downstream 11610 32452705 ~ 32471570 (+)
G119582 vangl2,LOC103137974 other downstream 327612 32768707 ~ 32769852 (+)
G119584 vangl2,LOC102795188 other downstream 333979 32775074 ~ 32775682 (+)
G119585 NA other downstream 339893 32780988 ~ 32781471 (+)
tep1 LOC104950563,LOC104941471 other downstream 547722 32988817 ~ 33049081 (+)

Expression


Co-expression Network