LOC120568580 (LOC102206875)


Basic Information

Item Value
gene id LOC120568580
gene name LOC102206875
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13440689 ~ 13465710 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816179.1
CCTCCTTCATATTGAGACAGATTCAAGAGGGTGTCGAGACAAACAGCAGTTCTACAGCAGGCTAAAAGAGTGGACATTAATGAAGATCAGTGATTAAAACGGCTGTTAGTGAGTAGGAACGCTGTGAATCGGTGATGCTGAGAAAGGGGGAGTGGGTATGGATGGACTCAGACATCGGGGTTCCCATCGGAGCGAGGGTCAACGTAACACCATCTGGTCAGCGGTTACTGGTGGACGATGATGGAAAGAAGCAGAGCCTGTCCCAGGAACAGGAAGCCTCTCTCAGGATCATGCACCCTACGTCAGTGGAGGGTGTGGATGACATGATCAAACTGGGTGACATGACCGAGGCCGGCCTCCTCAGGAACCTGCTGCTCCGACACAAACAAGGCATCATCTACACCTACACAGGCTCTGTGCTGGTGGCAGTGAACCCATACCAGGATTTCCCTTTATATTCAGTTGACCAGGTGGCGTTGTACCATGGTCGAAAGCTGGGGGAACTCCCTCCGCACATCTTCGCCATCGCTGAATCCTGCTACTGTAACATGATGCGCCATCTCAGGAACCAGTGCTGCATCATCAGCGGGGAATCAGGAGCAGGAAAGACAGAGAGCACTAAGCTGATCCTGCAGTACTTGGCAGCAGTCAGTGGTGAGCTCTCTAAACAGAAGATTGAACAGCAGATCCTGGAGTCTAACCCAATACTAGAAGCGTTTGGAAATGCAAAAACAGTCCGCAACGACAACTCCAGTCGCTTTGGGAAATATTTGGAGATCTTCTTCAATAAGGACGGAGCAATTGAAGGTGCTCGCGTGGAGCAGTATCTTCTGGAGAAGTCTCGTGTCTGCCGTCAGGCCCTAGAGGAGAGGAATTACCACGTATTTTACTGCATGCTGGCAGGAGTCACAGCAGAGGAGAAGAAAACCTTGAGCCTTGGAGATGCTGTGGAGTACGCATTCCTTTCTAAGGGCGGCCACACCATCTGTGAAGGCAGAGATGACGCTAAAGACTTTAAGCGTATTCGTTCTGCGATGAAAATCCTGACCTTCTCAGAAAGCCAGTGTCAGGAAATCCTCAAGCTGCTGGCAGCCATATTACACCTGGGAAACGTCTGCTTCCAAGCCAACACACAAAATAACTTGGAAACCAGTGACATCAGCAAGTCAGAACACTTCAGCATAGCAGCATCAATACTGGAGGTAAAAAAGTCTTCCCTGGCGACGAGTTTGACCCATCGTTCCTTTATGaccaacagagagagagtgaccaAACCCCTCAGCTCTGAACAGGCGTCTGACTGTAGAGACGCCTTTGTCAAGGCGATCTACAATAAGCTGTTCATATGGATCGTTGAGAAAATCAACAGTGTCATCTATAAGAAGTTGACCAAAAACCCCAAATCCTTCCTGTCCATCGGCCTGCTCGATATCTTTGGCTTTGAGAACTTCAAAACAAACAGCTTCGAGCAGCTGTGCATTAATTTTGCCAATGAGAAGCTGCAGCAGTTCTTTGTGGGCCACATCTTCAAGCTGGAGCAGAAGGAGTACCTGAAAGAGGACATTGTGTGGAATAACATCAAATTTAGTGACAATCAGAACGTCCTGGACATTCTGGCTGTGAAACCCTGTAACCTGCTGGCTCTGATCGATGAAGAAACCCATTTTCCAAAGGGCTCAGACTACACTATGCTGATCAAGATGAATGTACAACACCGTGGGAACAAGACTTACATTGCCTCCAAAAGTGAACATGACACAGACTTTGGGATTCGCCACTTTGCAGGCGTGGTTAACTACGACTCCAAAGGGTTCCTGGAAAAGAACAGAGATGCTGTCAGTTTTGACATAATCAAGATGGTTGAAATGACCACCAATAAGCTGCTTCATCAGATATTTGAGAGTGAGCTTTCAACCAATGGATTGAAGATCACTAACAACAAGAAGGTCATCATTACACCTAAGAGCTCTCTACGGGCCCAGAGTGACAAACGTAAACAAGTGGCGACGCTGAGCGGTCAGTTCCGTCAGTCTCTGGACTCCCTCATGAAGGCTCTGTCTGCCTGCCAGCCTTTCTTCATCCGCTGCTTCAAACCCAACAATGAAAAGCAGTCTAAGACTTTTGACAGAGAGCTGTGTATGCGTCAGCTGAGATACTCCGGCATGATGGACACCATCCGCATCCGGAAGCTGGGATACCCAATTCGCCACACCTTTGCGGAATTCCTGAAGCGCTACAGGGTGCTCCTGACGACGACCGTCTGTGACCCCAAAACTGTTAGTCCTGATGTGATCTTCCTGAGGGATGCCCATGACGCCGTACTGGAACGACTAAGGGAACAAAAACTCAGCAGGATAGCTCTGGTGATCCAGAGGGTCATGCTGGGACACAAAGACAGAAAGTCTTTCCTGAAGAAGCGGAGGGCAGCTGTGGTGTTGCAGAAGCACTGGAGAGCTTACAGACAGGAGCAACTGCGAAGAAAGCTCCGGCACGGCTTTGAGCGGCTGGCATCAAAGATCCGCAGTCGGAAGCTACGGTTACAGTACCTAAGACAGCGAGCAGCAGCCCTCACCATACAAAGCCAGGTTCGTGGCTACCAGGCCAGGAAGGGCTGGAAGCAGAAGAGAGAGGCAGTCATACTGCTGCAGGCTTACAGCAGAGGACTCCTGGCCAGAAGAAGAGCTCAAAAGATGAGGGGTGATGCCTCCCTTTTACACCTGGAGAAAGCAAAACAAGAGAAGATAGCTTTGGAGCTTGAGCAGCGTCTGAAGGTTATCGCCTTGTCACAACCAGCTAATGAGGAGCCTGAGCCAATCGTTGAACACGATTCAGAGGAGAGCACGTATGATCTCACGCCTCCTGTGGAAGTGGTAGAACTGAAAGCACCTGAATCCGATAATTATCAGCAGAGGAGGAACGTGCCAGAGCCGGTGAAGGAAATCTCTGATGAGATCTCAGAGCTGGAAATCATCGCTGCAGCCTCAATTTCAACAACCCCCACCCCATCGCTGGAAGAGGACGAAGACGACGAGTTTGATGACGGCAGTGATGAGTTTTCGTTCTACAAATTCAGCATCCTTAACTTCCAGAGCAACCACAGCCACACGCACATCAACCAGAGAATCAGGCAGCCTCTTTTGCCCCACGATGACGAGGGCGACATACTGGCATGTCTGACTGTATGGTGGATTATACTGCGTTTCATGGAGGACCTGCCGGAACCAAAATCTATGGACGCGATGTCTCAAGCATCCAGCACCATCTCGCGTAATCTGCCTCAAAGGCAGGGCAGGAGGCTGAGCAGCCTGGTGGGACTGGATCAGAAAATACTGAGGAAGCACAAGAAAAAGATCGGAGTTGGAAACAGAAAAGCTTCTGTAATTATTGAGGAGCCAGACAACATTACAGAGGACGAGGACATTTTGGTTGGAGAGGGTCCGACACTGGATCGGCCACTTACATCCGTGGAAAAACTACACATTATCATCGGATACGCTCTATCGAGACGAGACATAAGGGATGAGATTTACTGCCAGATCTGTAAGCAGCTGGTGAACAATAGGAACAAGAGGAGCCGTATGCAAGGCTGGACCCTTCTTTCCATCTGTCTCGGGATCTTTCCCCCAACAGACCTCTTCATGAAGTATTTGGAGAATTTTGTCCACAGGGAGCCAAGTGGTTATGGAGAATACTGTACTGGGCGCCTGCGTCGTATAATAGCCaacggagaaagaaaagagttgCCCTGTTGGCTCGAGCAACAGGCTGCCAAATCTAAGGAGCCCATAGATGTGTCTGTGAATCTACTGGACGGCCGCAATATCAGTGTACAGCTGGACTCGGCTTCCACCTCTGCTGAAGTCTGTCAAGCTGTGGCTGACAAGATTGATCTTCGAGACATATATGGATTCTCCCTGTACATCAGTCTTTATGAAAAGATGTGGTCTCTGGGCAGCTGTGGGAAGCATGTGTTTGACGCAGTGTCTCAGTGCGAGCAGGAAATGAGGAGGCAGAGCAAAGATGAGAAGGACGCCCCCTGGCAGCTCTCCATCCGAAAGGAACTGTTCACACCCTGGCATGACTGCTCAGTTGACCCAATCAGCACAGATCTAATCTACAGACAGGTCATCAAGGGAATCAAGTCTGGAGAGTACATCAGTGACAAGGAGGATGATTACGTCCAGCTGGCAGCAAAGCACTATTACATCCAGTTTGGCTCTGCATACAACAAAGACAACGTCCAAAAGGTGGTTGAGGAGTGCATCGAAACCACACTTATTGAGAACAAATCTATGACAAAGTGGATCCAACTCATAAGCGAAGCACACTTACAGGGTCCCTATGTCAACGGAAGGCAGAAAACAGACAGTGTAAAAGGAGAACTGGTCAACAGCGCCCAACACATATGGCCTCTGCACTTCTCTAAGTTTTATGAAGCTACAATGATGTCAGGACCTCCTTTGCCTAAAAGCAGGTTTGTTGTGGCTGTAAACTGGAATAGCATCTTCTTCATGGATGGAAGAGACAAGAGACTCCTTGAGCTTTCCTACCTAGAGGTAAAGGACATACACATGATCAGTGACAGCCATGTCAGTGCTCAGTCAGTAAGTTTGGCCACAGTCAAAGGAGAGTTTGTGCTGAAGTCTGGGGAAGCTGTGGACATGGTTGCAGTTATAGAGAAAAACCTGAAAGGGCTGAGACAGCGCTCAGTGTATGCAGTGGCTCGGCATGATGCCAGTAAACCAGATGACCCCACATTCCTGGTTTGTAAACGAGGGGACCTGCTGTTGGTAGAGAAAGATGAAGAAAGTTCTTCTGATAAGAACTTGATCAAAGCAACCAACAATCGGACCAGCGCCACCGGTGTGGTCTACAAGGATACAGTGCAGTTTCTGCCGACTCTAGAGAAGCCCACTAGCGATTTGCTGGAACTGATCAGCCCAGGCCAAAGGAAACTTTCAGTAGCACAAAACACCCTACCTATTTACGAAACAGTGGCTCCTGTCTCTTTAAAAGAGTTTGCACTTGAGAACTTCAGGCCTGCAGGCCCTGTCGGTCGACATGGTGCGTCCAAAGGGGTCAGCAGGGAGAAGCTGTGGGCTAGTTCAAGAGAACCTCTCAAACAGCCACTGATGAGGAGCCTGGTCCGCAACTCTGACCTCAGCAACCTGGCCTGCAACGCTTTCACTGCTATCCTGAAGTACATGGGCGACTACCCCATCAAACACGCTCGCAGTCCTTTAGAGCTGACTGACCAGATCTTCGGTCCGGCCACCCAGCATGAAGCTCTGCAGGACGAGATCTACTGCCAAATTATGAGACAGatgaccaacaacaacaacagGTTGAGTGTGGAGCGTGGGTGGCAGCTCATGTGGCTGTGTACAGGCTTGTTCCCGCCCAGTCCGGATTTAATGAGACACACTCAGAGCTTCTTGGAGTCACGGCGCAGAGACCAGCTGGCTCCTGACTGCCTGCAGAGGCTGCATGCGATGCGCAGTAAGGAGCCCAGGACGCTTCCCTCTCATTCGGCAGAAGTGGACGCCATCCAACAGAACAGCACCCAGATCTTCCATAAAGTCCACTTCCCAAATGACACAAGTGATATATTGGAGGTGAAATCGACGACCACAATCAAAGACCTGTGCTACAGTATTGCCTCTAAGCTCAAACTGAGCTCAGCTGACGGATATGGCCTATACCTAAAAACTGCAAACAAGGTCACAAGCTTGCAGGAGCAGAAgtatttttttgacagtttaagGCAGACTTCAGAGATTCctaagaaaggaaaaaaagcgaAGGAAGGCAACCAGGCCAACGTGCCCTACCTGGTGATCTTTAAGAGGAAGCTCTGGTTCAACGTGAGCCCGGGGAAAGACCTGGTTGCAGACCTCACTTTCCATTTCCCACAGGAGCTGCCTAGGTACCTGCGTGGATACCACAATTGCACCAAAGAGGAGATGATTAACCTGGGTGGGCTACTCTTCAGAGCCAAAGTAGATTCAGACAGGTCGCAGTTTGTCATGATCCCCAGAATGTTGAAGGATTTGGTTCCTGCTGACCAGTTAAAAATCATGTCCCCTGAAGAATGGAAGAAGCACATCATCTCTGCCTACAACAAGCAGAGTGGCATGACTTTGCAAGAGGCCAAAGTTGCCTTCTTGAAAGGCATTTCGGTCTGGCCAACCTTTGGCTGTGCCTTCTTTGAAGTTAAACAAACGTGTGAATCTAGCTACCCAAATACAGTTTTGATCGCCATCAGCAAGCAAGGTGTCAGCTTATCAGACCCAAATACAAAGGAGCTGCTGGTTATGCACCCGTTCAGCCGCATCACAGAGTACCAAAGCGAAGGCGGCTACTTTGAGATGACCATTGGCACCCTGGTGAGGGGCAACATCTTTGTCTGTGAAACCCCTCAGGCCAACACAATGGAGGACCTTCTTAGATCCTATGTCACTATGTACGAGAGGCAGACAGAGGCCTTTCGAACAAGGAATACCATGTTTTCCTGAAGCTTTAAGGGCAAAAGAATAGACTGAGCCGCTGTGATTTATATGCACTCTTGATcaatatatgtatttgtgtacTTTAAATGGCACATTTGTGCCCAATAGATATTGCTTCTACTAAACAAGATAGagatattaaaatgtaagtCATGTA

Function

NR:

description
PREDICTED: unconventional myosin-VIIa-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816179.1 True 6666 mRNA 0.49 50 13440689 13465710

Neighbor

gene id symbol gene type direction distance location
LOC120568786 LOC104934149,LOC103354348 coding downstream 3240 13421548 ~ 13437449 (-)
LOC120568167 slc25a30,LOC106963122,LOC103151570,LOC107086856,LOC102233249,LOC100698510,LOC102198731 coding downstream 78647 13354229 ~ 13362042 (-)
ednrba ednrb,LOC103354354 coding downstream 107684 13326841 ~ 13333005 (-)
LOC120568165 LOC104935786,LOC103354355,LOC104967951 coding downstream 122350 13311801 ~ 13318339 (-)
sugt1 sugt1 coding downstream 130605 13289358 ~ 13310084 (-)
si:ch211-252f13.5 LOC104963693,LOC102078510,LOC102307931,LOC101471818 coding upstream 103639 13569349 ~ 13575574 (-)
LOC120568814 LOC106928308,LOC103129201,LOC107086848,LOC103354342,LOC101170217,LOC106961870 coding upstream 129468 13595178 ~ 13619698 (-)
LOC120567843 ptchd3,LOC103354362 coding upstream 174812 13640522 ~ 13644542 (-)
LOC120567845 ptchd3 coding upstream 177650 13643360 ~ 13645194 (-)
LOC120567847 LOC102799957,LOC102205731,LOC101468926,LOC102313119 coding upstream 185558 13651268 ~ 13659457 (-)
G114215 LOC103354350,LOC100704451,LOC101473770,LOC106904511,LOC103151571,LOC106963118 non-coding downstream 33859 13394461 ~ 13406830 (-)
G114202 NA non-coding downstream 151696 13288182 ~ 13288993 (-)
G114199 NA non-coding downstream 153469 13286651 ~ 13287220 (-)
G114196 lect1 non-coding downstream 154525 13280931 ~ 13286164 (-)
G114183 NA non-coding downstream 216824 13197745 ~ 13223865 (-)
LOC120568710 NA non-coding upstream 67428 13533138 ~ 13549466 (-)
G114247 anxa13,LOC105930306,LOC100703370 non-coding upstream 90894 13556604 ~ 13564803 (-)
G114256 LOC102077222,LOC102776852 non-coding upstream 157193 13622903 ~ 13625479 (-)
G114257 NA non-coding upstream 160066 13625776 ~ 13628667 (-)
LOC120567953 NA non-coding upstream 476345 13942055 ~ 13948115 (-)
G114152 NA other downstream 352126 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 465361 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 672064 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 832120 12601180 ~ 12608569 (-)
G113805 NA other downstream 1222422 12218062 ~ 12218267 (-)
dis3l2 dis3l2 other upstream 3821 13469531 ~ 13482225 (-)
tfr1a NA other upstream 484161 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1147903 14613613 ~ 14618224 (-)
G114680 NA other upstream 1330208 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 1824372 15290082 ~ 15304610 (-)

Expression


Co-expression Network