egfra (LOC103369338)


Basic Information

Item Value
gene id egfra
gene name LOC103369338
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20461791 ~ 20504276 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816205.1
CTGCACGAGCTCGGACTGCTGGAGATATCtgcgaggaggaggagctgtCAAAGTTTGAGTTTCCCAGAGAAGGAAAAGTCTTTTACTaaacgagaaaaaaaaactaaagaaagatttttcagttttgatAAAGCGGAATATCGCGTGTTGTTGGCATGGAATGACACCTTCTCACCGGGAGCTTCAAAAACACGATGGCCACCCGTTTTGTGAAGTGGATCAGTCTCACCTCTCTGCTCTGCTTGGGCTGCTGTGTTCTGGCGGAAAGGAAAGTTTGCCAAGGCATCAGCAATCGTTTAAACCTTCTGGGTTCCAAAGATGACCACTACCTGAACATGGTGAAGACCTACAGCAACTGTACTGTGGTCCTGGAGAACCTGGAGGTCACCTACATGGAGGAGCACCGTGACCTGTCCTTCCTCACGtCTATTGAAGAAGTGGGCGGCTATGTGCTGATCGCCCTCAACACAGCATCCAGGATTCCTCTGCAGAACCTGCGCATCATTCGAGGTCATTCGCTCTATGAGGGATCGTTTGGCCTCGCTGTGCTGACCAATTATGACAAAACTACAGGTCAGGGCACCAATGAGCTTCTTCTGACCAACCTGACAGaaatTCTTAAAGGAGGTGTAAAGTTTGGGACCAACCAGCCATGCAATGTTGAAACAATACAGTGGTATGATATTGTCAACACTGATATCAAACCCAAAATGGTGCTTCCATCGGCTATTAGCCATCCACGTTGTAAAAGCTGCGACCCAAGCTGCTTCAATGGCTCATGCTGGGCACCTGGTCCTCAAAACTGTCAGACCTTAACAAAGCTGAACTGTGCACAGCAGTGCTCAAAGAGATGCAAAGGGCCTTCACCCAGCGACTGTTGTAATGAGCATTGTGCTGCAGGCTGCACAGGACCACGGCCCACCGACTGTCtgGCCTGTCGGGACTTCCAGGACAACGGGGTGTGTAAGGACTCCTGCCCGGGCCTCATGCGCTACGACCCCAACCTGCACCAGCTAGTACCCAACCCATTTGGAAAGTACAACTTCGGGGCCACCTGTGTAGACAGCTGCCCACATAACTATGTTGTAACTGATCATGGAGCTTGTGTGCGGACGTGCAGTGTTAACACATATGAGGTGGACGAGGGACGAATCAGGAAATGCGCCAAGTGTGATGGACTGTGCCCAAAAGTGTGTAATGGACTTGGAATAGGAAACCTGACTAACACATTGTCTATCAATGCCACCAACATTGATTCCTTTAAAAACTGCACAAAAATCAATGGTAACATTGCTATCATCAAGACATCAATTTATGGTGATGACTATACCAAAACACCAAAGATGGATCCTGCCCAGCTTGATGTGTTTAAGACAGTTAAGGAAATTACTGGATACTTGTTGATTCAAACATGGCCAGCGAGCATGAGCTCACTCAGTCCTTTTGAGAATCTGGAGATCATCCGAGGACGAACTAAGCGTGGTAGCCGGAGCGTGATTATGGCTCATCTTGATATCAACTACTTGGGCCTTCGCTCCCTCAAAGAAATCAGCGATGGAGACGTGGTCATCATTAAGAACCGGAACCTGTGCTACGCCAACAATAGCCACTGGAAGGGGCTCTTCAAATCAGAACGCCAAAGTGCTACCATAGAGGAAAATGCTGATGCTGCCACATGTGcCCTGCAAAACAACACTTGTGACAGGAAGTGTGCCACGGACAGCTGCTGGGGCCCTGGCCCGGACATGTGTTTTGCCTGCCGTGACCACAGCCGTGATGGGAGCTGCGTTGACTCCTGCAATATCCTGGAGGGAGAGCCGCGAGAGGCCGTCGTGAATAAAACCTGCATGGAGTGTCACCCCGAGTGTCAACGCTTGAATGGAACCGCAACCTGCAGTGCGCCTgGTTTTGGAAACTGTACTAAGTGTGCCAACTTCCAAGATGGCCTGTTCTGTGTTTCTCGATGTCCCCAAGGCGTGCCAGGGGAGGACGACATGCTGGTGTGGAAATACGCAGATGAGATGAAAGTGTGCAGGCTATGCCACAAAAACTGCACTCAAGGGTGCCAGGGGCCTGGTCTCCAAGGCTGCCAGAGTAAAAGCCCCTCTGGCCTTTCCATGATTGCGGCTGGTATAGTTGGTGGGATGCTGGCTGCTCTTGTTGCAgccctgtctgtgtttgtgttgctacGCCGACGCCACATTAAGAGGAAGAGAACCATGCGCAGACTTCTCCAAGAGAGAGAGTTGGTGGAACCTCTGACTCCAAGTGGAGAGGCTCCAAACCAGGCTCTGCTGCGAATCCTGAAGGAACCTGAATTTAAGAAAATCAAAGTGCTGGGATCCGGTGCTTTTGGTACAGTTTATAAGGGCCTGTGGGTTCCGGAGGGAGAGGATGTGAAGATTCCAGTAGCCATCAAGGTTTTAAGAGAGGCCACATCACCAAAAGCAAACAAAGAGATCTTGGACGAGGCTTATGTGATGGCCAGTGTGGAACACCCCCATGTGTGTCGTCTGCTTGGTATCTGCCTGACCTCCACAGTGCAGCTCGTCACCCAGCTGATGCCCTACGGCTGCTTGCTGGACTATGTCAAAGAGAACAAAGACAATATCGGCTCTCAATACCTTCTCAACTGGTGTGTGCAGATAGCCAAGGGTATGAACTACCTGGAGGAGCGGCACTTAGTACACCGTGACTTGGCAGCAAGAAATGTCCTGGTGAAGACTCCTCAACATGTTAAGATCACTGACTTTGGTCTGGCTAAACTCCTTAACGCAGATGAGAAAGAGTACCATGCAGATGGCGGAAAGGTACCAATAAAATGGATGGCTCTTGAATCTATCCTGAAcagaacatacacacaccagaGTGACGTATGGAGTTATGGCGTAACAGTTTGGGAGCTGATGACATTTGGGACCAAACCGTATGATGGGATTCCAGCCAGTGAAATAGCTGGGGTCCTGGAGAAAGGGGAGCGACTGCCTCAACCACCAATCTGTACCATAGATGTCTACATGATCATGGTGAAATGTTGGATGATTGATGCGGATAGCCGACCTCGTTTCCGGGAACTAATAGCTGAGTTTACAAAAATGGCCCGGGATCCTTCTCGATATCTGGTCATTCAGGGCGATGACCGCATGCACCTGCCGAGTCCCACAGACACTAAATTGTACCGCAGCCTGATCAGTGGGGATGGAATGGAGGACGCTGTGGATGCAGATGAGTACCTGGTGCCACAACATGGCTTTTTCAGCAGCCCGAGCACCTCCGTCACACCGCTGCTTCACTCCACAAGCCTCAACAGTAGCATTGGAACATGCCACAGCAGAACTGGCTTATTGAACGGATTCCCGAGCAGAGATGGAAGCATAGTACTCCGATATATTCCTGACCCCACAGACAAACTTTTAGACAACGCCTTCCTGCCATCTCCAGACTACATGAACCAGAACGGAGTCTCAGATGTGATGAATCCCATCTACCAGCACCCTGGTCCACCTCGCACCATCCTTCCCACCATCTCTTCAGACGACACAGAGACGGAGTACCTGAACTGCTTCAAAAATGGGGCCTACGGACCTGAGTACCTCAACGAGGTCCGGTCCCCCGCTATGCTCCCGCACACCTCCAATGGCATGGTCCACAGCATTCAGAAATACCAGCCACAAAATAGCATAGACAACCCTGATTACCAACAGGATTTCACTCCCACCTTCAAGACTCACACCAACGGACACATCCCAGCAGCAGAGAATGCAGAGTACCTGGGCCCAGACTGAGGACTTAGGATACAGACAATAAATATGAGACGGTTTCCTGTTCCATTAAAAAGGGGCATCGATGTATTGGCTGAGAAAGCATAGCTAAGTGATACCATCAGTTATCATATATGTTCTTACGGAGTTAGTGACACTTTGTGCAGCTTTCTGTGTTGTGCGCATGCAGTCATACTTGTCACGCAAAACCCATCTCATCCCAAAGACTTTTTTCCTACCACCAAACTACAAATGACCTTTTCTTGATGAAAGCTGACTTCTACATGGCTCAGTTGACCTGAGAGTTGCTGGACCGGATGCGCTCCATCCATATGGTTCAACCCCTGTCAGAAAGTTGTGCACAAAATGCTGTATGTGATCACAACGCCTCCGTTTTTTTCTAGGAGGCAGAAGCTCTATTGCAAAGAACAAACTGGCAGCTCAACCCAAAACACAAGCCAAATGTGTTGTAGAATAAAACAGATACACAATCAGTCAACAGAATTGAAATGTTGGTATTTAAAGGGTTGACAATGCACAGTGGTGTGCTCACTTGATGCTGACGTGAAGGCTTGGAACATTTCTCTGTGGTGTCGTGACGATTAAAGGGAGATTTAAAAAATGCCGGCTCAGCTGTTGTGGTCCTCAGAGGCCTGACGACACTCATTTTGAAGGATGAGTCAAAGAGGAAACAAAATGTTGTAATGGATAGAATCTATTGTCAGTTTATAGGGGAATACTGGtgaattgtattgtttaaataTGTTACTTTTATGCTCTAAGACACTTCTGTATGTATTACAAACTGGTTGATGTGATAATATCACACTACCTGTGCAGAGAATGTTATGGTAAATATAGCAAACGTGATTGTAGTTGTATTCACACAGCTGTGTCTTGCGGTTCAAAATCTGCAGCACTCCTGTAGCATGAAGCCTATTTGTGTGGACCCACAAAGTTAGCTTAACTCTGAGCATTATATCAGTATGGCACATGTATTTGTGTACCCAGGAAGTATTTTGTGCTCTTCTTACTGATTATTTCCCCCCAATTAGTATCTTAACACTGTTTGCACTCACACAGTTTATCAAGTGTTTAACAATACAAAAAACGTTAAACTAAAAAGCTTCAAAAGAGTTTTCTTCTTGTTTGGAATATTGATGTTAGAACTGTCTTAGGTCATGTGACTAACTTGTTTGAATTGTTAGATTAGAAGTAGTATTTCCCTGTAAACATGAGTTGTTATACATACTATTTGAATTGCTACAGTCagaacaaaaatgtgtttaatgtatctaTTATTTCATGGAGACTTTTCCTtgtctgatttattttattttttacaaaagtgtAGACTGTTGTTTCACAAGGGTGTTGACACCATATCTATAGAGCTGCTCCTAGCTTCTTAGCTTTAAAGTTTGTAGTCTTCTAAGAGCATTAACTTTGCAAATATTATTCCTAGTTTTAAAGGAATATACTATTGTAGCAACCTGAAATGCCTACTTTTGCAGATTTTACACAGGTACATGTACAGAAAACAGTGATTATACTGTAATATACCCCAAAATAGTCACCTATAATTTATACTCATTACACAGTTTTGTCACATCATACGTGAATATGCACTTATTCCTGAATTGTGATTATTTCATTCAAACGTGAACAtgaataaatctttttttctatggaaa

Function

NR:

description
PREDICTED: epidermal growth factor receptor-like isoform X2

GO: NA

KEGG:

id description
K04361 EGFR, ERBB1; epidermal growth factor receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816205.1 True 5455 mRNA 0.46 28 20461791 20504276

Neighbor

gene id symbol gene type direction distance location
c1ql3b LOC108241646,LOC102783794,LOC101484294,LOC102201850,LOC103369334 coding upstream 52758 20407668 ~ 20409033 (+)
gpt LOC102200225,LOC103359759,LOC101485501,LOC100690242,LOC102299610,LOC102784352 coding upstream 65573 20376975 ~ 20396218 (+)
fuz fuz coding upstream 82484 20377158 ~ 20379307 (+)
ssx2ipa ssx2ip,LOC103359758 coding upstream 88646 20366760 ~ 20373145 (+)
mcoln3a LOC104953893 coding upstream 95259 20360283 ~ 20366532 (+)
npc1 npc1 coding downstream 3134 20507410 ~ 20523539 (+)
abhd3 abhd3 coding downstream 173081 20677357 ~ 20689630 (+)
rock1 rock1 coding downstream 236985 20741261 ~ 20779745 (+)
usp14 usp14,LOC102778130 coding downstream 277979 20782255 ~ 20792499 (+)
pth1r pth1r coding downstream 431159 20935435 ~ 20983609 (+)
G116327 NA non-coding upstream 139250 20322288 ~ 20322541 (+)
G116322 NA non-coding upstream 146520 20314888 ~ 20315271 (+)
LOC120567788 NA non-coding upstream 258053 20202125 ~ 20203738 (+)
G116216 NA non-coding upstream 558972 19902243 ~ 19902819 (+)
G116215 NA non-coding upstream 576092 19884595 ~ 19885699 (+)
LOC120567944 NA non-coding downstream 144329 20648605 ~ 20654150 (+)
G116461 NA non-coding downstream 187343 20691619 ~ 20691985 (+)
G116463 NA non-coding downstream 188611 20692887 ~ 20693141 (+)
G116464 NA non-coding downstream 189144 20693420 ~ 20696473 (+)
G116465 NA non-coding downstream 192628 20696904 ~ 20699209 (+)
LOC120567833 gbg5 other upstream 86158 20373227 ~ 20375633 (+)
emilin2a NA other upstream 996410 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 1409549 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 1736344 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 1787651 18660429 ~ 18674140 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 378341 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 1366677 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 2103773 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 2137234 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 2929349 23433625 ~ 23440843 (+)

Expression


Co-expression Network