im:7138239 (LOC104950317,LOC103353072)


Basic Information

Item Value
gene id im:7138239
gene name LOC104950317,LOC103353072
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18035952 ~ 18041729 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816210.1
ATGGATGTACCCCGGCCATTTCTTCTCCTCCTGTGTGCCCTCCACCTGACCTTGACCGGAGTGTTAAGCAAACACATAGATCACAGAAACCTGTTCACGCAGAGACTGTGCTGCAAAAGACAGAGCCACTTTGTCTACATTGGACAAGaCATCTCTGGGAGTCCTGTCAGTGTTGATGTGGGAATGTGCAGGTCGCACTGTGGGGGGGCATCCAGGCCATCACATGAAGAAGGGCAGCAGGAATACTCTAAACATTCCTCGATGCTGGAATTTCTCAGGAGCAAGAAAATGAGAACGCGCGGACCTGCAGCTCCAGAGAGTCCGGAGCCGCTGAACCATCTGCCCTCCTGCGGGATGAACCAGGTGTGTGAGCCGACCGGGGTGCGTGTAGACCGGGTGCTTCTCTTAGAGGGACCCCAGGAGGTGGATGTCATCGAGGAGTGCCACTGCGAGATCAAGTTGACCCAGTGCATCCGTGTCCCCGCACTGAAGACTTACTACTCCGAGACGCCGTATGAGACAGTCATCGACGTGGGACGATGCTCCCGGTCCAAGGGCtcaccagAGGGATTCTCCTGTGTCCCCACTATGTTTGAGTCAGCCTTGTTGGAAACCCCCAACAAAGTGGACCTCATCCAGACAGTGGCGGCCTGTGAGCTGAAGGAAAGCTGCTACAGGGTCCCATACGTGGAGTATTACTATGAAATAGTCAATGCAGATGGAGTCAAAGATGAGAGGCTCAAAGAAATAGATGTGGGCAGATGTTTGGGAGGCTGCACCACAGGAAACCGATGCCTTCTCAGGAGTCGATCTGATCCAGCAATCTGCCACTTATGGGCTGAAAGACAGTCCAGCTCCTGTGTTCCTCAGGGCTACGAGAGCCACAACTTCCTTAACCAGCATGGGCAGATACGCACCATCCTCTCCATCACTTCTTGCCTTTGCCAAAACTGAACACTGCACCCCATACTGGAAAACAACTTCTAATCTCTTCAGGCGTTGAACAGTTTTAATTCATGATGACCCCACAAATACTATACCATTTGTTTAAGAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC104950317

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816210.1 True 1054 mRNA 0.52 7 18035952 18041729

Neighbor

gene id symbol gene type direction distance location
LOC120569107 nrtn,LOC103353066 coding upstream 50412 17975976 ~ 17985540 (+)
larp6b NA coding upstream 62396 17972055 ~ 17973556 (+)
LOC120567749 LOC103353067 coding upstream 68259 17787785 ~ 17967693 (+)
tceanc2 tceanc2 coding upstream 452191 17580659 ~ 17583761 (+)
lrrc42 lrrc42 coding upstream 461479 17571577 ~ 17574473 (+)
LOC120567609 LOC103353062,LOC104950308 coding downstream 1668 18043397 ~ 18045228 (+)
cib3 cib3,LOC107687907 coding downstream 6337 18048066 ~ 18052429 (+)
ap1m1 ap1m1,LOC107696211 coding downstream 33378 18075107 ~ 18090043 (+)
LOC120568288 klf2,LOC104966780 coding downstream 106169 18147898 ~ 18149844 (+)
LOC120568290 dnah8 coding downstream 134254 18175983 ~ 18231000 (+)
G115600 NA non-coding upstream 15842 18019905 ~ 18020110 (+)
G115599 ranbp3,LOC102787870 non-coding upstream 16338 18016563 ~ 18019614 (+)
G115585 NA non-coding upstream 67910 17967740 ~ 17968042 (+)
G115516 NA non-coding upstream 456363 17578910 ~ 17579589 (+)
G115513 LOC103353967,LOC104931261,LOC102192286,LOC100692446,LOC101469749 non-coding upstream 470470 17565255 ~ 17565482 (+)
G115633 LOC102219409,LOC104931433,LOC103479775,LOC104950312,LOC105022474 non-coding downstream 11139 18052868 ~ 18058243 (+)
G115636 tpm4,LOC107383605,LOC103146061,LOC102218802,LOC103479776 non-coding downstream 18980 18060709 ~ 18065238 (+)
G115660 LOC102296215,LOC102788438,LOC100704618 non-coding downstream 129950 18171679 ~ 18174071 (+)
LOC120568296 NA non-coding downstream 190888 18232617 ~ 18233706 (+)
G115690 NA non-coding downstream 192014 18233743 ~ 18234058 (+)
LOC120567767 NA other upstream 6057 18027280 ~ 18029895 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 552399 17406497 ~ 17483553 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 1423746 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 1508270 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 1807401 16226307 ~ 16228551 (+)
G115729 NA other downstream 263420 18305149 ~ 18354344 (+)
skila skil,LOC102782637 other downstream 524904 18566633 ~ 18602263 (+)
LOC120568691 NA other downstream 618700 18660429 ~ 18674140 (+)
LOC120568911 NA other downstream 678636 18720365 ~ 18725447 (+)
LOC120568770 NA other downstream 975310 19017039 ~ 19052242 (+)

Expression


Co-expression Network