LOC120568628 (LOC103354350,LOC103478943,LOC107086843,LOC100704451,LOC101473770)


Basic Information

Item Value
gene id LOC120568628
gene name LOC103354350,LOC103478943,LOC107086843,LOC100704451,LOC101473770
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13394488 ~ 13410455 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816255.1
GTGACTCATGCTTGCGTGAAGAGACCAATGAGCAGCCAGAGCCTGAGATATAAATAACGAATAAAAAATATTCTTGAGGGAGAAAGGGTCACTTGCGCGCCGCTGGATGGGATTTTATTAGTGCGCTCTGTTGGTATTCCGCCATCACTGGACTGTTCCTTGTCGTGTCTTTGGGTTGCAATTGTAACATCTAGTTATAGTTTCTCTGGACTGGACAACCTGTGCGCCCGTGAGTCGTTGAATTATTTCCCAGCTGGAGATCAGATTACAGAGGACTGATGGCCACGTCTGAACCGAGAGCCACTGGCGGGGACCAGGACCCCAACTCCGACAATTTAAGACCTCCGTCCACAACCTACGAATATGCGTGGATGCACGGATGTACACGGAAACTGGGGATGAAGATTTGTGGGTTCCTGCAGAAGAACAACAGCCTGGACGAGAAGGGGAGGCTCGCGGGCCAGAAGAACTTGCTCTCGTGCGATAACAGTGACAGGGACGCGCGCTTCCGCCTCTCCGAGACCGACTTCTCCAATCTGTTCGCCAGAGACTTGCTGCCAGCCAAAAATGGAGAAGAGCCTACTATTCAGTTTTTGTTGGAGATTGTGGACATCCTCACCAACTATGTCAAGAAGACTTTCGACCGCTCCACTAAGGTGCTGGACTTCCACCACCCCCACCAGCTCCTGGAGGGTATGGAGGGCTTCAACCTGGAGCTGTCTGACCAGCCCGAATCCCTGGAGCAGATCCTGGTGGACTGCAGGGACACGCTCAAATATGGCGTCCGGACAGgTCACCCACGATTCTTCAACCAGCTGTCCTCTGGTCTGGACATCATCGGTCTGGCCGGAGAGTGGCTCACCTCCACCGCCAACACCAACATGTTCACCTATGAGATCGCTCCAGTGTTTGTGTTGATGGAACAGCTGACTCTGAAGAAAATGAGAGAGATGATTGGTTGGGCCGGTGGAGAGGGAGATGGACTCTTTTCACCAGGGGGCGCTATCTCCAACATGTACAGTGTGATGATGGCACGTTACAAGTATTTCCCCGAGGTCAAGACCAAGGGCATGTCTGCGGCTCCTCGCCTTGTCCTCTTCACATCCGAACACAGCCACTACTCCATAAAGAAGGCTGGAGCTGCTCTGGGTTTTGGCACTGATAATGTGATCCTGTTGAGCACAGAtgagagGGGGAGAGTCATTCCTGCAGATCTGGAGGCCAAGATCATTGATGCTAAACAGAAGGGATATGTGCCATTGTTTGTGAATGCCACAGCTGGTTCGACAGTGTACGGTGCATTTGACCCCATCAATGAGATCGCTGACATCTGTGAGAAGTACAACTTGTGGCTCCATGTTGATGGTGCGTGGGGTGGTGGACTACTGATGTCCAGGAAGCATCGCCATAAGCTTGCCGGAGTTGAGAGGGCCAACTCTGTCACGTGGAACCCTCACAAGATGATGGGCGTGCCTCTCCAGTGCTCTGCAATCCTGGTCAGAGAGAAGggAATTCTGGCAGGCTGTAACTCCATGTGTGCTGGCTACCTGTTCCAACCAGACAAACAGTACGACGTCAACTACGACACAGGGGACAAAGCAATCCAGTGTGGCCGACACGTCGACATCTTTAAGTTCTGGCTCATGTGGAAGGCCAAGGGCACCATAGGGTTTGAGCAGCACATTGACAAGTGTTTGGAATTGTCTCAGTACCTGTACAACAAGATCAAGAACAGGGAGGGATATCAGATGGTGTTTGATGGAGTGCCCCAGCACACCAATGTTTGCTTCTGGTACATCCCACCCAGCCTGAGAAGCATGCCTGATGGCGAGGAGCGGCGagaaaaactccacaggGTAGCGCCAAAGATCAAGGCCATGATGATGGAGTCAGGGACCACCATGGTGGGCTACCAGCCTCAGGGCAAAAATGTCAACTTCTTCCGCATGGTCGTCTCCAACCTCGCGGTCACCCAGTCTGACATCGACTTCCTCATCGATGAGATTGAGAGGCTCGGTCAAGATCTGTAGTCCTTCTCAGCCGTCGCTGCTCTAGTGGCCAGAGGGCGATCATGCAGTCGTCTATCTGTTGTATTTCCAAGGCAAATGCCAATGGGGGGAAACATTTACAGTGCTGCGGACAGAATAATGATAGGACATGTTTTAGGTTCTTTCTATccagtctgtctttgtctgaAGCATTCTGACTGTTTCTCCAACCGAAGGGAAGCTAGAAATGAGAGAGACTTTGAGTGTGTTACTTGCTCGCCCACATGGTTCCTCCTCTATAAATATATAAGTATCTGAAGGCTCCACGTCCAACCAACATGCTCTAATGTATGTGTGCGCTGTGGATTCTTGtaatgtgtgcgtgtatgtgatCCAGTTTCTCGTTTAATGTAGTTTGTGTTTtaacgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctatgtgtgtgcctgagtgtgtgtgcgtgtggtcaAACACTTAAAGGGAGAAAAGCACAGATGCAAATTAACAAACTGTCATAAAATTATTCTGCTGTATCATACATTTGCTACGCAAAATTGAATCATTGGTGCTTTCCGCTGTACATATTATTCTCAGTGCACTGACTTATTTGTCCTAAACCAGTGTccgtgcagtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgcgtgtgcaggtGTGTATCCTGTCATGTATTTTAAGCTAGCACTGTGTTATAAATAAGCTTTTCATAACCTTATGTGCACACCCTACCAAGCGTGTTAAACTGAGGCATTTTGATCACCTCCAGCAACTGATCTACAGTCTGCAATATTTTCCCTCATAGAACTTTAAGATTAAGATTTAAAATGTCCACAGCTGTCCCAAGTCTGTGACAACTTGTAAAACGCTGGCTCGTTGTTTTCATGCAATCATGTGATAATCATGTGTTTATAACAttgttaaaatattaaatattaagatTATATAAGAACTCATATTTATTGCATTTCCACTGTTTGCAGATTCAGGTATTTCATTGTAAATGTATCTTTATTTGTATTACATTGTAATACATTTCTAAATGTAATCACAGAGACTagagtaaagtttatttatagtgCTTTTGTCAGCCAAAGAAAGCGAATCGGGAACAGAGCAATCCATTGTCCTTCATATAGAACTTGTTATAGATTATAGGTGTTTGTAAAATGTTACCTATTGACCCTTGACTGCGATGCAATTTCTATGGTGTGTTTCTTTCTGTGATTGTGAGTCTTTTGGACCGAATGTTTTGAGATGACTGACTGGCCTTCTGATGAGATTAAGAATGAAGTTTATATAATCCTCGTCTTTTATTTTAGAGAATAGCACAAGGATGTGAGAATGTACTCTTTTGAGACTGGGAAGAAAGTATTGTTGTATCTGTCTGAATCCTAatgcatttactgtaatatagtatatattaaTTGTAATACATATTACCTGTATTCTCAGTGTTATGGGAACTCAATGTGTGTCTTTGCACAATGTTAACCTTTCTTTCTTCCATTGTAAATGGATGTGTACTATGGCAGTATTATATAAGACTTAAGTTAACAAAGTATTTATGGCATCTAGGGACCATATGTAAATGGCACAAGTGCATAAATAATTTTTAAGGTAATCTGTGTGCTGTATGTGACCaatcttttagttttttgttgttgttgacaaaGCCAGCTGTAAGGGAACGTTTCCCAGGAGGCACTTTAACAGAACCATACCATcttgaaaaaaattaataaagtcTACTAAAGGAAAA
>XM_039816256.1
ACTCATGCTTGCGTGAAGAGACCAATGAGCAGCCAGAGCCTGAGATATAAATAACGAATAAAAAATATTCTTGAGGGAGAAAGGGTCACTTGCGCGCCGCTGGATGGGATTTTATTAGTGCGCTCTGTTGGTATTCCGCCATCACTGGACTGTTCCTTGTCGTGTCTTTGGGTTGCAATTGTAACATCTAGTTATAGTTTCTCTGGACTGGACAACCTGTGCGCCCGTGAGTCGTTGAATTATTTCCCAGCTGGAGATCAGATTACAGAGGACTGATGGCCACGTCTGAACCGAGAGCCACTGGCGGGGACCAGGACCCCAACTCCGACAATTTAAGACCTCCGTCCACAAGGTTCCTGCAGAAGAACAACAGCCTGGACGAGAAGGGGAGGCTCGCGGGCCAGAAGAACTTGCTCTCGTGCGATAACAGTGACAGGGACGCGCGCTTCCGCCTCTCCGAGACCGACTTCTCCAATCTGTTCGCCAGAGACTTGCTGCCAGCCAAAAATGGAGAAGAGCCTACTATTCAGTTTTTGTTGGAGATTGTGGACATCCTCACCAACTATGTCAAGAAGACTTTCGACCGCTCCACTAAGGTGCTGGACTTCCACCACCCCCACCAGCTCCTGGAGGGTATGGAGGGCTTCAACCTGGAGCTGTCTGACCAGCCCGAATCCCTGGAGCAGATCCTGGTGGACTGCAGGGACACGCTCAAATATGGCGTCCGGACAGgTCACCCACGATTCTTCAACCAGCTGTCCTCTGGTCTGGACATCATCGGTCTGGCCGGAGAGTGGCTCACCTCCACCGCCAACACCAACATGTTCACCTATGAGATCGCTCCAGTGTTTGTGTTGATGGAACAGCTGACTCTGAAGAAAATGAGAGAGATGATTGGTTGGGCCGGTGGAGAGGGAGATGGACTCTTTTCACCAGGGGGCGCTATCTCCAACATGTACAGTGTGATGATGGCACGTTACAAGTATTTCCCCGAGGTCAAGACCAAGGGCATGTCTGCGGCTCCTCGCCTTGTCCTCTTCACATCCGAACACAGCCACTACTCCATAAAGAAGGCTGGAGCTGCTCTGGGTTTTGGCACTGATAATGTGATCCTGTTGAGCACAGAtgagagGGGGAGAGTCATTCCTGCAGATCTGGAGGCCAAGATCATTGATGCTAAACAGAAGGGATATGTGCCATTGTTTGTGAATGCCACAGCTGGTTCGACAGTGTACGGTGCATTTGACCCCATCAATGAGATCGCTGACATCTGTGAGAAGTACAACTTGTGGCTCCATGTTGATGGTGCGTGGGGTGGTGGACTACTGATGTCCAGGAAGCATCGCCATAAGCTTGCCGGAGTTGAGAGGGCCAACTCTGTCACGTGGAACCCTCACAAGATGATGGGCGTGCCTCTCCAGTGCTCTGCAATCCTGGTCAGAGAGAAGggAATTCTGGCAGGCTGTAACTCCATGTGTGCTGGCTACCTGTTCCAACCAGACAAACAGTACGACGTCAACTACGACACAGGGGACAAAGCAATCCAGTGTGGCCGACACGTCGACATCTTTAAGTTCTGGCTCATGTGGAAGGCCAAGGGCACCATAGGGTTTGAGCAGCACATTGACAAGTGTTTGGAATTGTCTCAGTACCTGTACAACAAGATCAAGAACAGGGAGGGATATCAGATGGTGTTTGATGGAGTGCCCCAGCACACCAATGTTTGCTTCTGGTACATCCCACCCAGCCTGAGAAGCATGCCTGATGGCGAGGAGCGGCGagaaaaactccacaggGTAGCGCCAAAGATCAAGGCCATGATGATGGAGTCAGGGACCACCATGGTGGGCTACCAGCCTCAGGGCAAAAATGTCAACTTCTTCCGCATGGTCGTCTCCAACCTCGCGGTCACCCAGTCTGACATCGACTTCCTCATCGATGAGATTGAGAGGCTCGGTCAAGATCTGTAGTCCTTCTCAGCCGTCGCTGCTCTAGTGGCCAGAGGGCGATCATGCAGTCGTCTATCTGTTGTATTTCCAAGGCAAATGCCAATGGGGGGAAACATTTACAGTGCTGCGGACAGAATAATGATAGGACATGTTTTAGGTTCTTTCTATccagtctgtctttgtctgaAGCATTCTGACTGTTTCTCCAACCGAAGGGAAGCTAGAAATGAGAGAGACTTTGAGTGTGTTACTTGCTCGCCCACATGGTTCCTCCTCTATAAATATATAAGTATCTGAAGGCTCCACGTCCAACCAACATGCTCTAATGTATGTGTGCGCTGTGGATTCTTGtaatgtgtgcgtgtatgtgatCCAGTTTCTCGTTTAATGTAGTTTGTGTTTtaacgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctatgtgtgtgcctgagtgtgtgtgcgtgtggtcaAACACTTAAAGGGAGAAAAGCACAGATGCAAATTAACAAACTGTCATAAAATTATTCTGCTGTATCATACATTTGCTACGCAAAATTGAATCATTGGTGCTTTCCGCTGTACATATTATTCTCAGTGCACTGACTTATTTGTCCTAAACCAGTGTccgtgcagtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgcgtgtgcaggtGTGTATCCTGTCATGTATTTTAAGCTAGCACTGTGTTATAAATAAGCTTTTCATAACCTTATGTGCACACCCTACCAAGCGTGTTAAACTGAGGCATTTTGATCACCTCCAGCAACTGATCTACAGTCTGCAATATTTTCCCTCATAGAACTTTAAGATTAAGATTTAAAATGTCCACAGCTGTCCCAAGTCTGTGACAACTTGTAAAACGCTGGCTCGTTGTTTTCATGCAATCATGTGATAATCATGTGTTTATAACAttgttaaaatattaaatattaagatTATATAAGAACTCATATTTATTGCATTTCCACTGTTTGCAGATTCAGGTATTTCATTGTAAATGTATCTTTATTTGTATTACATTGTAATACATTTCTAAATGTAATCACAGAGACTagagtaaagtttatttatagtgCTTTTGTCAGCCAAAGAAAGCGAATCGGGAACAGAGCAATCCATTGTCCTTCATATAGAACTTGTTATAGATTATAGGTGTTTGTAAAATGTTACCTATTGACCCTTGACTGCGATGCAATTTCTATGGTGTGTTTCTTTCTGTGATTGTGAGTCTTTTGGACCGAATGTTTTGAGATGACTGACTGGCCTTCTGATGAGATTAAGAATGAAGTTTATATAATCCTCGTCTTTTATTTTAGAGAATAGCACAAGGATGTGAGAATGTACTCTTTTGAGACTGGGAAGAAAGTATTGTTGTATCTGTCTGAATCCTAatgcatttactgtaatatagtatatattaaTTGTAATACATATTACCTGTATTCTCAGTGTTATGGGAACTCAATGTGTGTCTTTGCACAATGTTAACCTTTCTTTCTTCCATTGTAAATGGATGTGTACTATGGCAGTATTATATAAGACTTAAGTTAACAAAGTATTTATGGCATCTAGGGACCATATGTAAATGGCACAAGTGCATAAATAATTTTTAAGGTAATCTGTGTGCTGTATGTGACCaatcttttagttttttgttgttgttgacaaaGCCAGCTGTAAGGGAACGTTTCCCAGGAGGCACTTTAACAGAACCATACCATcttgaaaaaaattaataaagtcTACTAAAGGAAAA

Function

NR:

description
PREDICTED: glutamate decarboxylase 1-like isoform X2

GO:

id name namespace
GO:0019752 carboxylic acid metabolic process biological_process
GO:0030170 pyridoxal phosphate binding molecular_function
GO:0016831 carboxy-lyase activity molecular_function

KEGG:

id description
K01580 E4.1.1.15, gadB, gadA, GAD; glutamate decarboxylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816255.1 True 3804 mRNA 0.45 17 13394488 13410455
XM_039816256.1 False 3744 mRNA 0.45 16 13394491 13410455

Neighbor

gene id symbol gene type direction distance location
LOC120567765 NA coding upstream 1885 13389221 ~ 13392603 (+)
LOC120568688 lect1 coding upstream 108310 13279076 ~ 13286178 (+)
LOC120568782 pcdh8 coding upstream 116059 13274162 ~ 13278429 (+)
LOC120568679 NA coding upstream 170634 13213316 ~ 13223854 (+)
trnae-cuc_17 NA coding upstream 176278 13218139 ~ 13218210 (+)
LOC120568788 gorasp2,LOC103354349,LOC101074307,LOC105930246,LOC106513812 coding downstream 1498 13411953 ~ 13420965 (+)
LOC120568709 LOC103354345,LOC100697448 coding downstream 77006 13487461 ~ 13554660 (+)
anxa13l anxa13,LOC100703370 coding downstream 145130 13555585 ~ 13566467 (+)
LOC120568315 NA coding downstream 167777 13578232 ~ 13592369 (+)
LOC120568344 LOC103354340 coding downstream 210105 13620560 ~ 13629924 (+)
G114063 NA non-coding upstream 38438 13354254 ~ 13356050 (+)
G114032 NA non-coding upstream 105485 13288193 ~ 13289003 (+)
G114055 NA non-coding upstream 107269 13286650 ~ 13287219 (+)
LOC120568783 NA non-coding upstream 139903 13250751 ~ 13254585 (+)
G114037 NA non-coding upstream 187465 13204825 ~ 13207023 (+)
G114094 NA non-coding downstream 59056 13469511 ~ 13472357 (+)
G114095 NA non-coding downstream 62559 13473014 ~ 13473251 (+)
G114271 NA non-coding downstream 248587 13659042 ~ 13659381 (+)
G114301 NA non-coding downstream 322227 13732682 ~ 13732963 (+)
LOC120567951 NA non-coding downstream 332820 13743275 ~ 13840945 (+)
si:ch73-71c20.5 NA other upstream 208124 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 269025 13123030 ~ 13125463 (+)
rpl37a rpl37a,RPL37A other upstream 277132 13114596 ~ 13117356 (+)
col6a1 col6a1 other upstream 319894 13010575 ~ 13074594 (+)
LOC120569010 NA other upstream 434139 12952548 ~ 12960349 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other downstream 876695 14287150 ~ 14295993 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 1575322 14985777 ~ 14993083 (+)
ro60 trove2 other downstream 1603288 15013743 ~ 15026208 (+)
G114789 NA other downstream 1741341 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 1928102 15338557 ~ 15368780 (+)

Expression


Co-expression Network