dusp22b (dusp22,LOC103368952,LOC104931523)


Basic Information

Item Value
gene id dusp22b
gene name dusp22,LOC103368952,LOC104931523
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 22480588 ~ 22484971 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816280.1
GAGGAGCTTGGGAAGCAGCTCTCGGCTTGCTCGGACGCGGAGCCGCTCCATTTGCACCCTACAGCGGGATTGGGAATGCGTCAAGCCGCTGGATAAGCATTTTTAAACAACGAGGAAACACTGCGTGgcatttcttttcacttttattttttagactGGATCTGTCAGCATGGGGAATGGCATTAATAAGGTCCTGCCTGACTTGTACTTGGGGAATTTCAAAGATGCAAGAGACCGAGAACAGTTAGCCAGAAACAACATCACACACATCCTGTCCATTCATGACAGTGCAGCTCCCATCCTCCAGGAGATGACCTATCTCTGCATTTCAGCAGCTGACCTGCCCACACAAAACCTGACTCAACACTTTAAACAAAGTATAATGTTCATGCACGAGTCCCGCCTCAAAGGAGAAGGCTGCCTCGTTCACTGTTTGGCAGGTGTATCCCGCAGTGTCACCCTGGTGGTGGCTTACATCATGACGGTGACAAGACTGGGCTGGCAGGAGGCGCTGGCTGCGGTGAGGGTGGTCCGGCCCTGTGCTGGCCCCAACCTGGGCTTTCAGCGCCAGCTCCAGGAGTTTGAGACTACTCAAGCTGATCAGTTCAGAGAATGGCTACAGAAGGAATATAAGGACAGCCCCTTCAACGATGAGGCTGATCTACGTGACTTGCTTGCCAGGATGTCTAAAGTCAATGGTGAAAGGGTGGAAAAACAGGCATCTACCCCAATTGGAGGTTTCTAATCAGATCTTTTGAATAAAGATATTTTGCTGCTCAGCCTGGAGGATTACACCAGTGTGTGATGCTACAGTATTCTGGACCTATCTGGAAGTCTAATGGGCTTTGGAGTGGCCTATTATCAGGATGTTTATCGCTGTTGGAGTGATCCTCTAGATGTCATAGATATGAACACTGGAAGAGACAATCAACATGCCCAGcacatgtatacatttttagCTCTGGTTGATGTTTGTggtactgtgttttttttctaatttatgattgttgtgtttttttggggcattgTTTCATGATGATTTCAAATTGTGAAATAAAAGGAGTAAAGTCAA

Function

symbol description
dusp22 Enables non-membrane spanning protein tyrosine phosphatase activity and protein tyrosine kinase binding activity. Involved in several processes, including cellular response to epidermal growth factor stimulus; negative regulation of focal adhesion assembly; and negative regulation of non-membrane spanning protein tyrosine kinase activity. Acts upstream of or within negative regulation of transcription by RNA polymerase II. Located in plasma membrane. Part of cytoplasm; filamentous actin; and leading edge of lamellipodium.

NR:

description
dual specificity protein phosphatase 22-B-like isoform X2

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0006470 protein dephosphorylation biological_process
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816280.1 True 1072 mRNA 0.47 7 22480588 22484971

Neighbor

gene id symbol gene type direction distance location
irf4a LOC103368953,LOC104943383 coding downstream 624 22466809 ~ 22479964 (-)
foxq1a LOC104941088 coding downstream 42854 22436460 ~ 22437734 (-)
LOC120567665 LOC104931526,LOC104941071,LOC103370819 coding downstream 45611 22431645 ~ 22434977 (-)
foxc1a LOC103370816,LOC104931527,LOC104941097,LOC102782320,LOC100700524,LOC102209299 coding downstream 54653 22423693 ~ 22425935 (-)
wrnip1 LOC104941238 coding downstream 233000 22238488 ~ 22247588 (-)
opn7a LOC102784990 coding upstream 11101 22496072 ~ 22503579 (-)
phlpp1 LOC103368950,LOC101477421,LOC102207086 coding upstream 40290 22525261 ~ 22573807 (-)
LOC120567969 LOC103368948,LOC102290339,LOC102784041,LOC100706175,LOC101476947 coding upstream 91362 22576333 ~ 22622878 (-)
LOC120569075 LOC104929330,LOC103371151 coding upstream 204103 22689074 ~ 22694675 (-)
LOC120568657 tns3 coding upstream 218493 22703464 ~ 22738248 (-)
LOC120568857 NA non-coding downstream 274597 22181964 ~ 22205991 (-)
G116954 NA non-coding downstream 279608 22195324 ~ 22200980 (-)
G116922 NA non-coding downstream 302054 22178293 ~ 22178534 (-)
G116893 LOC104955993 non-coding downstream 477730 21997794 ~ 22002858 (-)
G116832 NA non-coding downstream 669442 21810862 ~ 21811146 (-)
G117052 NA non-coding upstream 144925 22629896 ~ 22632268 (-)
G117055 LOC104929332,LOC102785373,LOC100706434,LOC102205468,LOC106925933,LOC103142996 non-coding upstream 185762 22670733 ~ 22674450 (-)
G117112 LOC104949490,LOC101162245,LOC103371147,LOC108239677,LOC107092425 non-coding upstream 322101 22807072 ~ 22809753 (-)
G117117 NA non-coding upstream 340402 22825373 ~ 22825583 (-)
G117114 NA non-coding upstream 348095 22833066 ~ 22834881 (-)
G116969 NA other downstream 212029 22261998 ~ 22268559 (-)
higd1a higd1a other downstream 1470012 21008048 ~ 21010576 (-)
tmie tmie,LOC102776014 other downstream 1485021 20984801 ~ 20995567 (-)
xcr1b.1 NA other downstream 2684829 19793342 ~ 19795759 (-)
G116138 NA other downstream 3015208 19464700 ~ 19465380 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 860747 23345718 ~ 23361580 (-)
G117259 vps4b other upstream 945395 23430366 ~ 23430992 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other upstream 983649 23468620 ~ 23491612 (-)
LOC120568990 LOC101487892,LOC104941256 other upstream 1366102 23851073 ~ 23856621 (-)
G117560 NA other upstream 2014409 24499380 ~ 24536496 (-)

Expression


Co-expression Network