gad3 (LOC104936027,LOC102300090,LOC102207797,LOC101470357,LOC101067284)


Basic Information

Item Value
gene id gad3
gene name LOC104936027,LOC102300090,LOC102207797,LOC101470357,LOC101067284
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 8348359 ~ 8373438 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816300.1
AGGGAGGGATATCTCAAAGCCTAGCCAAATAAAACCAAATGATGTTGAAAGAAAAGTGAGAATTTTGCATTTTTTAGTTTGGGTGGGCATACCCTGAATGCTGTGATCAAATGAAGAAAAACTCATAGCCCTACATGGCATGATGTCACATAACAAAAGCATCATGCAGGTGTTCCTTGCTTTCAGCGACAGCCAAACAGCTGCAGGCTGCAGACCACACCTCCCTTCACCTGCTGCTCTTTAAATGCAGCAGACTGGCACCACACTGTCTGTGTGCCTCCTGTTGGATGAATTCCTATCACAGACTTCTAAGCAACCCTCAGGCGGGCCGGTTTATCCACACATTCTCAGAGGACTCAATGAAAAGTGATTTTCGGGATATCTCGACCGTTTTATAAGAATAGTAACAGTGGGACTGAACTAAATTGCTCGGAAACATCTTTGAAGAACAATTTGTAATTTGTATTGATATGGATTTCTTACAGCTGCCAGAAAGCATCATTAACAAATCGGGTGGGATGGACAAACAGCAGGAGAAGTCGGCAGCAGtcagagacagaggacagacaaCTGCCGACTTCTGCAGCATCTACAGCAAAGacctGCTCCCAGCTTCAGGTGGTGAGGAGATTACCAGAGAATTTCTGCAGGAGCTGCTTAACATCCTGTTGAGTTATATCAGCAAGTCAAGCCAGAGGAGCTCCAAGATACTGGACTTCCACCATCCTCACCAGCTGAAGGAGGGACTGGAGGGCTTCAGTCTGGATCTGCCGGACCAACCGGAAACTCTGGAGCAGATACTTGTGGACTGTAGAGACACACTCAAATATGGCGTcaacacagGCCATCCACGTTTCTTCAACCAGCTGTCTTCAGGTCTGGATGTGATTGGTATGGCAGGAGAGTGGTTAACCTCTACAGCCAACACTAACATGTTTACATATGAAGTGTCTCCTGTTTTCATCCTCATGGAAGAGTTTCTGCTGAGGAAGATGCAAAGCATTGTGGGATGGTCTGATGATGAGGGAGACGGATTCTTCTGTCCAGGAGGCACAATATCCAATCTGTACAGCATCCTGGTGGCCAGATATCACTTCTACCCAGAGGTGAAGACCAGAGGGATGGGACTTCTGCCTCAGCTGGCCCTCTTCACTTCGGAACATAGTCACTATTCAGTGAAGAAATCTGCAGCTGTGCTCGGGATGGGCAGTGACAATGTGGTCATGGTGAAATGTGATGAAAGAGGGAAAATGATTCCAGCTGAACTGGAGGCTTGCATTGTTACAGCTGAAGAAAAGgGTTTGGTTCCGTTCTATGTGAATGTGACAGCAGGCACCACCGTGTACGGAGCCTTCGATCCTCTCATTGCCATTGCTGACATCTgccataaacacacactgtgGATGCATGTTGATGCAGCGTGGGGGGGAGGCCTGCTGATGTCAGACAGGCACAGGATGAAACTGCAGGGCATTGAACGagCCTGGTCTGTAACATGGAATCCTCACAAGATGATGGGCGTCCCTCTGCAGTGCTCTGTCATACTAGTCAAAAAGAGAGGTCTCTTGCAGGAGTGTAATGAGTTGGGGGCTGAGTACCTTTTCCAGACAGACAAACCCTACGATGTGAGCTATGATACTGGAGATAAGAGCATCCAGTGTGGCCGGCATGTCGATGTCTTTAAACTTTGGCTCATGTGGAAGGCAAAGGGCTCAGAGGGCTTTGGATCTCAGGTCAACAGATGCTTAGAGAATGCTGAGTATCTGTATGACCAACTGCAGAGGAGGACAGACTTTGAACTGGTCTTCAAAAACAAACCGGAGCACAGTAACGTGTGTTTCTGGTACATCCCTCCCAGTCTGAGAGGCCTGCCACCTGGACCTGACAGAGACACAAGACTCCATCAGGTGGCTCCTCGGATCAAAAGAAGGATGATGGAGAAGGGCTCGGTTTTGATTGGCTATCAGCCTTTGGGAGCCAAAGTCAATTTCTTCAGGTGTGTGTTCTCCAATCCTGCCACACAGCAAGAGGACATTGACTTCCTGCTGGACGAGATCACCCGGCTGGGTGATGACCTATGACATCTGATATGATTGTTTGGTCTCAGCCCAGTTCATGTCATTAGAGGAAATGAGTACATCCGACTTTGAGACCATTGTTTTGCTGTGGCATAAGCCTACATTGTATCCGGCCTGGGTACACAGAGAAATGTTGGTGCACAGGCTTTTGACAATTACTGTACTCCTAGCTATGCTCTACAGCCTTTGCTGAACATTAccgcttttgatagttttacagcattaaacattaaaagcaaCTTTTTAcagggtggcctctagctcacccagtaagagcgttcgccccatgttgctGCAGCAgcgcagggtttgaatccgacctgctgccctttgctgcgtgtcatcccccatctctctccccctttcatgtctatctaCTTTCAGAAATAAAGGGAAACCCCCCCCCATAAAAGCAACATTTTACTATCATATCACAAGAAAATTGTCCCTTTTTAACATTGATGTAACTATGCTGACCCTTTTCTATCGAGCCTTTATTAAatctgtgttgtctttttccctTATGTCTTGGTTCGGGAGCCTCtaaaaaactgaaactaaaactaGCAAACACACCCTAGAAGCTAAACATAAATGAAACTGAAAAATATAAACTAAATAACCttagaatagaataaatcttTAATGTCCACCAAGGTGGACATTTTTCTTTGGCTCACCAGCCATACAAGACAGATAAACATACAGACAACATCTCAGACATAATAAGTGGAGTATAAAAAGattaaa

Function

NR:

description
PREDICTED: glutamate decarboxylase 1-like

GO: NA

KEGG:

id description
K01580 E4.1.1.15, gadB, gadA, GAD; glutamate decarboxylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816300.1 True 2828 mRNA 0.46 16 8348359 8373438

Neighbor

gene id symbol gene type direction distance location
tmem68 tmem68 coding upstream 135767 8202224 ~ 8212592 (+)
blvra blvra coding upstream 172405 8164406 ~ 8175954 (+)
cdc14aa LOC104931871,LOC103370748,LOC100703039,LOC108411489 coding upstream 286259 8044004 ~ 8062100 (+)
LOC120567733 en2,LOC103370758,LOC106578606 coding upstream 548868 7792663 ~ 7799491 (+)
LOC120568159 NA coding upstream 617891 7630655 ~ 7730468 (+)
LOC120568256 NA coding downstream 146729 8520167 ~ 8528904 (+)
ptf1a ptf1a coding downstream 166943 8540381 ~ 8541623 (+)
LOC120568645 LOC101470953,LOC103363941,LOC107102700,LOC108246684 coding downstream 222948 8596386 ~ 8621676 (+)
fam110b fam110b,LOC102786931 coding downstream 291910 8665348 ~ 8704766 (+)
fam151a LOC107081349 coding downstream 344431 8717869 ~ 8736105 (+)
G112949 NA non-coding upstream 6376 8341330 ~ 8341983 (+)
G112940 dnajb6,LOC104936025,LOC101470590,LOC102214955,LOC100708567,LOC102785555 non-coding upstream 18072 8326727 ~ 8330287 (+)
G112862 NA non-coding upstream 106940 8239025 ~ 8241419 (+)
G112856 NA non-coding upstream 117283 8223833 ~ 8231076 (+)
G112855 NA non-coding upstream 129297 8218246 ~ 8219062 (+)
G112966 LOC103366012,LOC103131821,LOC102230409 non-coding downstream 15948 8389386 ~ 8391491 (+)
LOC120568255 NA non-coding downstream 20073 8393511 ~ 8399327 (+)
G112975 NA non-coding downstream 137652 8511090 ~ 8516736 (+)
G112995 NA non-coding downstream 197028 8570466 ~ 8570735 (+)
G112999 NA non-coding downstream 255134 8628572 ~ 8654614 (+)
G112932 NA other upstream 35283 8309850 ~ 8313076 (+)
dnai4 NA other upstream 444437 7885498 ~ 7903922 (+)
G112670 NA other upstream 1312659 7035027 ~ 7035700 (+)
G112655 NA other upstream 1339202 7007242 ~ 7009157 (+)
LOC120568216 NA other upstream 1399229 6890987 ~ 6949130 (+)
LOC120568257 LOC102194642,LOC101465810,LOC102289180,LOC103366014,LOC103129983,LOC107384349,LOC103396642,LOC108246689 other downstream 33491 8406929 ~ 8510408 (+)
atg10 atg10 other downstream 335223 8708661 ~ 8715271 (+)
LOC120568415 LOC103370799,LOC104931865,LOC101476899,LOC102794599,LOC102300092 other downstream 415771 8789209 ~ 8809459 (+)
LOC120568881 mfsd12,LOC104931866 other downstream 439459 8812897 ~ 8825811 (+)
pdca LOC103370803,LOC104933924,LOC101478313,LOC102200750,LOC100699795,LOC102301525 other downstream 522489 8895927 ~ 8902847 (+)

Expression


Co-expression Network