LOC120568652


Basic Information

Item Value
gene id LOC120568652
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 29516140 ~ 29546049 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816304.1
GCACAGCCTTGCAgccacagagggagagacaagAATGGAGGAGGCTGCCCTGCTGAAGGAGAGGCTCCACGCCATCACCGAGAAGCGTCGCATTCAGGAAGACATCAGGCAGAGGAAACTGGAACTGGACCGAGAAAAACTCAATCTACAGCATCTAAAGAAGAAAGCTCTGAGAGAGCAGTGGTTGCTCCAAGACTCAGCTTCCCACAATGCAGCAGGCTCTGACCATCAGCAGACCAGAGCACTGCAGCTGAACAtcaacagGATAGAAATGGAGGTGGAGTCTCTGGAGGGACAGGAGTCGATGATTTCTGCCAGGGAAAGTTTCATCCTCAACAGACTGAAGGCTGTGGAGAAAAGTCCAGGGGACATTATCAagGAGGCCCAGGACAACTTTGTTCCAGAGCCATTCCATGTCCCAGAATCCCTCTCTCCACCAGCCAACCAACTCCCTGAACCAAACACACCAAGAAAGACTCTATTTGCCATGGAGATCAATGTGAGTAAAAACCTGCTGACTGGGACGCGCACGGTGCTTTCTACTGCAACAGTTCCTCCGGAGGAGTTAGAGCAACACACCGGGCGCAAGGTCTACGACGATGGCAGGAAGTGTGTTTACGCCTTGAATTCACAAGAGAGCTGTGAGTCGGAGCTGTCAGCCAGCGAGGTGGAACATTTGCTGAGAAGCGCCACAGTGCATCGCCAAGCAAAGCAGCTGAACCCCGGCGGGAGGGAGGAGCATTGCTTTTACCACCACCAAGATGAGAGAGACACAGTGGGAAGGCTTGACCTCAGAAAGCAGCGAGCATATCTGGCTAACCGTCTCCTCGGGAACAACATGGCGGAGAAAGACTTGAGCTGCAGGGAGACGTGGCAGAGGAAACCAGGGCCAAAGCATCGCTGTGCTCAGCTGGAGAGCCATTACAGACGGCCCCAAGAGGGGAATAACCACAGCAATAACCTTGGCAACCACAAGGGGGCGGGGCAGCACTATGGCAACCAGAACGATGGCCACTCCAATTCCTACCTAGTGAGAAACGGTCACCGTGTTGCTAGCCACCACGCACGCAGCAGCAGCATCCCAAGCAACAGTATGGCCAAGGGAGGCCCTCTTCCCAGGTCACATGACCAGGAAGCAGTGTCTGCCTACCAACCGCAGCTCTGCTACACTCCAGCCAATCATATTCCTCTCAGCGATTACATCAGCGTGGACGAAGAAGAAGTGTACTGCTACTGCAGCCACGATGCTCTGTGCAGCGGCAGAGTGCCCTCCCCCCTCTACGCAGACGACCCCACCTACACCATACTCAACACCATGGATACCACTGAGCCAATCACGGCCATCTTCATGGGCTTCCAGACGGCGCAGGATGACAGCAGGCCGGCTAGGGAGTGTGAGGACTCGCTGAAGGCAGAGCTGGTCATCATTGAGGACACCGAAGACAGCGAGTACGACCACAGCACGAAGGAGAACAAGTGCTACGTCCAGCCTGGGGACAAAAGTTATTCAACAGGAAGCTCAGCCAATGGAAACTTTGGACGAGTGGAGGGAGTtggagacagatggacagagagaCGGATGGGGCCAGGTATCAGAAAGATccagaaaaaacacaaagccTGCTGTACAGTCTGCTAACAGCACTGACTGACACATGGCTGAGTGTCCAGTCTACTAACAGGACTGACTGATACATGGCTGAGTGTCCAGTCTGCTAACAGGACTGACTGATACATGGCTGAGTGTCCAGTCTACTAACAGGACTGACCGATACATGGCTGAGTGTCCAGTCTGCTAACAGGACTGACTGATACATGGCTGAGTGTCCAGTCTACTAACAGGACTGACTGATACATGGCTGAGTGTCCAGTCTGCTAACAGGACTAACACTGACTGACTCCACTCATTAACACCACAGCATTCATTCCATACATGCActgcattgttttgcttgattagTTTCCTGATATTTTGTGAATAATCTGCTACTATGAACAGGTCTGACTCATGTTGTGTGTTAAGGGTTTTCGGCGTAAGCTATGCAGTAGATGGAGTACATGCGCCTCCTTAAACAAGTAGCTACACATCGGGGGCTACGGCAGCACCACGTCACGACAACTACTGTGATTCGTTACTTTTGCTCCAGGCTAACTTTTTTCCTCCCGCAAATGTTTGAAATGTAGCAAATAAAACAAGGAAGGTGTGTTTTCATCCACCTGTTTTTATTCACGCTTTCAATTTAAGTGGGTAAAAAGGCCCGGGAACTTAACTTAGACCCAGTCCCTGCAGTCCAAATACAATGAGTTCCCCAAAAGGTTTTTAGTCCCTGGGGAAAGTTCCTGCGGTTCGAAGGGGCTTTAGAGCTAAGctagtgaacatagtggagcattaaTCAGCTAAAGAGAATATCAGACTTACATCATCAGGTGAACACAGACATGACTCCAAATAAATGCTTGTTTTGCTCCATGTCTGCTTGATATGTTAAAAATATGCGTTTGTTTCCTAATATATTAGCCTTAATAACTTTGTAAAACGTCGCATCTGGCAGCGTGTCATGGACATGTTCTGCCAATAGGTGgcaaaaaaatctattaatgCAGATCAAATACAACATTACAAGGTACATACAAAGGTATCCACCCAAAAAACCCAGTACCAAGTATTATCAAAACTTCTTCAGTCAAACCATACCAGCATCATATCTTTTTTGGACCCAGAGCTAGAAAAAAAAGACCATCACCGCAGGGGTTGTTTATTTGAATGCGGCGTGTGATTGGCCCAATACTGCAGCAGCTACAACCCAGACAGACTGATGTGGTGGTGAAGTTGAGCAtggtgatttttttcccccaaaatttGTATTATGAAATACGAGGACTTCTGGTGATTGGCTTCGGTTTGGCCCTCTTATTACGCATATGATACATTAGCACAGAGACTGAGTGTTCATGACATTGCAACTCTCCAATCTTTAATAACAAACAGCTGCTCATAGGGTGTAGGCCAATTAGTTTTTCACAATGGGAAAGGAGAGGTATCCATGATGTGACGGGATGGTCTCAGATAATTTCAAGACCTTAAAGACAGCTATAACTTACCGGGcacttcattctttttttatttacagctTAGGGCATCCCTCAAGGCTCATGGTATTCCGTGGAATCAGCCCCTAGAACAACACCCATTCCATAGAACCATCAGTTCCAGAGGTGCCTCTAAAGGTTTAGCCTCCACACTTTACTCAAAATTGCTTGACACTTGTTATAAGACTCTCTGTAGACAGGCAATGGATAGGTGACATCCCAAACGATCCCGACCATCAACAAATTCAATTATGTGCACAGAACTTACCTAACTCCAAGGAGAATGCACTTCATGAAAATTGTACCTAATTCCCTTTGTTCCTTATGTTCTCTGGGGGTCCATGGAGCCTTTATCCACATGTTCTGGGAGTGCCCGCCTGTAGCTCAATTTTGGAGGGAAGTAGCCATATCAGAAGTGAATTGTTTTGGCAGGCTTAACAGCGGCTAAGAAACTCATTGCAATGTGTTGGAAACAACCTGACAAACTTTCCATCACTCATTGGGTTGTCACATTTCTCGATGTTATCCACATGGAACAATCATATGCTCGTACAAATGGGGTTAAGGCAGACAACCTTGATCAAAGGCTCTGGTGTAATCAGTaggtgtgtttccatccaattgtcaagcaaacttttaaaatgttgcaaaaaataaaaataaagaaaatgcgaATAAGAAGCTTTTCTATCAACTGGTTTAAAGCGAATAAACTAGACTACGCAAAGCGTAGTTTCTTCACAAGTTGACGTTAAGCATGGTTGTAGATAGCAAACCGgcttgctaaatcaaagagaagctaagttctttggctaaatTGAGAGAGGTAGCATTGTATAAGTGGGCCACCTGTGGGTTGTGGCAGAGGTGTCAGCAAGACAACTGTTCATCGATGTGTATACGCGGTGTGCAGAGCCACACGATTCAAGCTGTTGAAACAATTCGTCAATTTACCCGAAATGGCTTCCCCCATCCTCAGTCATGTGAGTTACATGTTCGCTACGTCACAACTTATTCGgcaaagctgtttccatctcccattttgcacattaactttttttttttttttgaaaaaggcaaaaaccacctcaagTGAGCGTAAAAAACGTTTGCGAATTTGAGGACGTTTTTTTGAATTTTGCCatttccatcaacattttctaatgcgaTATTTCAAAATACGGCTAAAAATACGTTGATATAAAACACAGCTTCCATTAATCAGCAGGTCTTTCATTGTGACCCTGGAGGTCCTTGGGATGGGGTGGGAgggtttatttaattttat

Function

GO: NA

KEGG:

id description
ko00190 Oxidative phosphorylation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816304.1 True 4378 mRNA 0.47 9 29516140 29546049

Neighbor

gene id symbol gene type direction distance location
si:ch73-257c13.2 NA coding upstream 197322 29316220 ~ 29318818 (+)
LOC120567683 NA coding upstream 261464 29253394 ~ 29254676 (+)
LOC120567682 NA coding upstream 280152 29234683 ~ 29235988 (+)
LOC120567681 LOC107104891 coding upstream 319778 29195088 ~ 29196362 (+)
LOC120567680 LOC107752212,LOC107675959,LOC107679452 coding upstream 323982 29191093 ~ 29192158 (+)
LOC120567686 NA coding downstream 144908 29690957 ~ 29692353 (+)
LOC120567688 NA coding downstream 189471 29735520 ~ 29743592 (+)
LOC120568908 NA coding downstream 485861 30031910 ~ 30033534 (+)
LOC120569089 NA coding downstream 498845 30044894 ~ 30046190 (+)
LOC120569133 NA coding downstream 509766 30055815 ~ 30057109 (+)
G118859 NA non-coding upstream 49537 29466260 ~ 29466603 (+)
G118839 NA non-coding upstream 170437 29345502 ~ 29345703 (+)
G118802 NA non-coding upstream 295389 29220360 ~ 29220751 (+)
G118800 NA non-coding upstream 337181 29178729 ~ 29178959 (+)
G118792 NA non-coding upstream 341677 29174212 ~ 29174463 (+)
G118884 NA non-coding downstream 4525 29550574 ~ 29550809 (+)
G118888 NA non-coding downstream 29466 29575515 ~ 29576313 (+)
LOC120567627 NA non-coding downstream 41596 29587645 ~ 29588546 (+)
LOC120567652 NA non-coding downstream 144411 29690460 ~ 29690894 (+)
G118943 NA non-coding downstream 361784 29907833 ~ 29908479 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other upstream 1346170 28156801 ~ 28169970 (+)
LOC120568664 NA other upstream 1810929 27704001 ~ 27705211 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 1906422 27602000 ~ 27609718 (+)
gpr35b NA other upstream 2116744 27394523 ~ 27399396 (+)
LOC120569025 NA other upstream 2333420 27179097 ~ 27182720 (+)
LOC120567689 NA other downstream 417366 29963415 ~ 29969913 (+)
LOC120568595 sdr16c5 other downstream 1023046 30569095 ~ 30677352 (+)
G119114 NA other downstream 1619177 31165226 ~ 31203586 (+)
G119123 NA other downstream 1652911 31198960 ~ 31235565 (+)
G119257 NA other downstream 1913815 31459864 ~ 31460908 (+)

Expression


Co-expression Network