pth1r (pth1r)


Basic Information

Item Value
gene id pth1r
gene name pth1r
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20935435 ~ 20983609 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816305.1
TGCCGCTTGCCACATCTGGAGACGCTTCCTAACACGGGAAACTTCAACTTTTGCGTTTACTCTGAGCAGAAACACTCAGGCGTTTGCGAACTGTCAATCCGTCAGGGATAATTTAGCTTTCTCGTGATATCGTAAGTAGATTCTTGAAGCCAAGTTGGCGTTTCTCTCTTTCGCTGAGCTTTTTTACATCACCATTGCTAAACAGAGCCAGTTTGGGAGTTTCATACATTCAGTTGCTGTGTGAACTGCCACGCTAGATTGTGTTATAATTAGAACGCGGTTTCTGGGAATAACATAAAAAGACACATGTGTGCTTTCATGAgtaaaaaagaaggaaatggaacAGCAGCAGTTCGTTGATTAAGTTGATTCACGCAAACAAATCTATGAAGGATTTTTAATTTATCGCTTTGCTCTGTCacaagattattattattattattattattattattattattattattattattattattattattatatattttttatcgtTAAATGTTTAAAGTAAACCCTGTCTGAGACCACAGCTGCTGCTTCACTGCCGCCTGCACGATATTAGCCTACATGACTGCGTTGATGGTGACATGAGTCAGAGGGAATCAAATTCAACAGCGACTTGTGATGGAGTGATACCTTTCTGGCTTATTTGTGTCCAACACTGATCTAACATTTTGGAAGAGAGAACTGGAATAAGCCATAAGGCGCACAGCTCCATACTGAAGTGTTTAAGTTATAGTCTGAGGGGAAATTTAAAAGACCTAAAAATACAGCGTTGGTTTCTTCCCTACAAAGAATCATTTGAACTTCCCACCGCAGAGCGAGAGCGACATAAATAGTTCTGACATGTGGATGTAATTtcagaagaggaaaaaagacaGATGCAGAGAAATAAACAGAGCGGGCTGAGCCTGAGCATATAGATTATAGGAAATTAAATCGAGGGCAGAGCGAGGCGATTACAGAGTTATGATTTCACAAGCCGCCATAAGCATCGATAGGCCAGATGGAGTAAAAAAACACACGCGTTCCACTTTGAAGAGAGTTAAGTAGATTAAATTATTTCATCTGAGCATCATCAGTGCCTGTTTGAGCCCCGCAAGGACTTTTGGAGGTAGAGTTGCCTCAGGTCAGGGATGGGATCCGCTCTGCTGCTCCACAATCTGGACTTTCTTCTCATCTCACTACTCAGCGGTTTCTGCCTGGCTTTCGCAGATGATGTGCTTACGATAGATGAACAGATAGGCCTGTTGGTCAGAGCCAAACGGAAGTGTGAGGGGAACATCAAGTCAAAGCACAAGGTTCCTGATGGTTATTGCTCACCAGAATGGGACGGCATTGTTTGTTGGCCTGAAGGGCCCCCAGGAAAGCTTGTATCCACCTCCTGTCCAGATTATATCCATGACTTCAACCATAAAGGACTAGCATACCGTCGGTGTGACAACAACGGAACGTGGGAACTGGCCACAGCCAACAAGACATGGGCCAATTATAACGAATGTGCAAAATTCCTCTACCCTTACAACCACAGCCATGAAAAGGACGTCTTTCACCGTCTGTATCTCATCTACACAGTCGGGTATTCCATCTCTCTGGGATCACTCATGGTGGCTGTGGTCATCTTGGGATATTTCCGACGATTGCACTGCACCAGGAACTACATCCACATGCATCTATTTGTGTCCTACATGCTAAGAGCTATCAGTATTTTTGTGAAAGATGTTGTGCTCTACTCTGGATCGGCCTTAGAGAACATGGAAAGAATCACAGTGGAAGACCTCAAGTCCATCACTGAGGCTCCGCCAGCCAACAAAACacagtttATCGGCTGCAAGGTGGTTGTGACCTTGTTCTTGTACTTTCTGGCGACCAACTACTACTGGATCCTTGTGGAGGGTCTGTACCTCCACAGCCTCATCTTTATGACCTTCTTCTCAGACAGAAAGTATTTATGGGGATTTACTCTGATTGGATGGGGAGTACCAGCTATGGTTGTGACAGTTTGGGCAACTATGAGAGCCACGTTTGCAGACACAGAGTGTTGGGACTTAAGCGCAGGCAATTTGAAATGGATATATCAAGTGCCTATCCTGGCAGCTATAGTGGTTAATTTTATGTTATTTCTGAACATCATCAGAGTCTTGGCAACTAAACTACGAGAAACAAATGCTGGAAGGTGTGACACAAGACAACAGTACAGAAAACTGTTGAAGTCCACGTTGGTGCTGATGCCACTCTTTGGTGTTCACTACATCATATTCCATGCCATGCCGTATACAGAGGTGTCTGGAGTTCCGTGGCTGATACAGATGCACTATGAGATGCTTTTCAACTCTTTCCAGGGATTCTTAGTTGCAATTATATACTGCTTTTGCAATGGGGAGGTGCAAGCTGAGATCAAAAAGTCCTGGAGCAGGAGGACTCTGGCCCTGGACTTCAAAAGAAAAGCTCGGAGCGGCAGCAACACTTACAGCTATGGGCCTATGGTATCAAACACCAGTGTTACCAATGTCACTGCCAGAGGGCCGCTGGCCCTCCACCTCACCACAAGGCTGGGACCAGTGCCTGTGAACGGGCACAGGAACCTCCCCGGGTACGTGAAGAATGGCTCTGTCTCTGAGAACTCTATACCCTCCTCGGGACAGGAGCTTCACATTCCTGATGAGGACCATTCGGCTCATACACGGCCCTGCGAGAAGGAGAAACCCTCACCtgtgatggaggaggagagggagacagtCATGTGACCTCCAGGCCGCTGTGTTTAGGGatgaaaactgaaaaacaaaaccaatCATGAAACAGTCTCAGGGCGGTCTGAAGGGAATGGCTGCATGCATTAACACTGCCAGTTTTTTCTCCTGTGAATCAAGCCAGAACATTGCCGACAGATGAGGCTCACGGCAAAAGGGTGTATCACTTTTGTGAGCTGGgccacctttatttgacagatGATGACCCTCATTGGAGTGGCAAAACACTCTCTTTCACCAACCACCTGCCACAGTGAATGTGTAAAAGGATAAAAACAGACTGCCGTTTCTTATTTCTTTTCCACTGCCATAACTGTTatcttgttttctgttttctgttttcttttttttttgtgcgccGCTTTTGTGCATAAATCATGGGGTTAGTTAGGTACAGTAGTTGCCAGGAACAGCCTTAATTATCACCTATGTAAAGCCAGGTGGATTCTGAGTGCACTTAGTGACACGTGTGGGCAATTCAATCAGCAAGTATTTGGATTAAGTCAGCGTGAGTAGAAGTAGTAATTGTAGGctcatcttaaaaaaagaaatgaatgctaCTATTTTAGGGCATCTGTTCATGCTTTCTGGCATGGCATCTCATTTGTTATGCATTGACTTAAATCCACTTTAGTGTAAAAGGGAAGGTACTCAGGTAATTGAAGTCCTCATTTGTTGCACaccattttttttatacttttaaagTGGTGTTTTAGCATGGTCAGCATTTCTCTGAGGGTGTTGGTATGTAATATAAGtctgtgttaaatattcttttttcaaaatgttgtaCAGTTTctgctttagaaaaaaaattgtattcatCTCCCTAATTACAACAGATTTCAACGAGTTCAAATGAATGTTTATATTcagattttctctctctctctctctctctctctctctctctcacacacacacgcacgcacacacgcacgcacgcacgcacgcacgcacacacacacacacacaatgccaaAGTAAGAATATCTTTTGGAGACCGTCTCTttctttgggttcaacattagTTGAGCTTAAGAAGAAATGTATGGAAATCTGACAAAACCGGTAtcatatgttcccacagtcaAGTTTTCAAAGTACGAGAACCCAGTTAAAAACACAGGGTGCAGGAAATGGTCATGTATTCCAGTGGAATGTTAATTAAATGAGGATTCCAAGAAAATCTCATATTCCATTGGAATTCCAAGAGTGACATTTGTGGTAGATATGAAGGAAAAGCCAGACATGAACAACACGCAGTAATTCTTTCAGATGGTCCAGTGTTATGCTGCTTTTTGATGTGTATATACAAGTCACAATGTTTACAAAGATCAGAAATACATTCTAATTGTGAGCTAATAGTGTTCATGTGTACGAATATGTTATAATGCTGtttcaatgttgttgttttttcatgtaaTTGTTTACGGAATGTTTGCAATATTTGGTTATGTATATAGTCCAAAACAAAACTGGTGAATATATGTACAGGTGACGGAGGGCATTCAAACTAGTATTTAATGAAGCATTCCACAAGATATTTTAAACTCTGTAACTTTTAATGTTGCAGGTTAAGTGTGGTAAATTAAAAGTTACAGAGTTTAAAATACTATCTGTTATACCAAAGAGAAAAGGCTTAATACCCTGCCATAGAAAAGATTATTTTGCagcatttctttctgttttcatCCACCATCTTTACAGTGACCAAAAATTCATAAAAGTTGCAGTAAAATCACCCTCTCTTACCAAACCAAAAAGTATTTGCTACTGGTGTAGTTAGTGTAGGAAAATGTCAAGATAAAAGTGTTGAAATAGTGCACCCACATAGATCAAAGTTTCTTTAGAAATACTCAATTTCATGAAAACAGCAGTGAGGCAAATGAGAAAACTATTCACAACACTCAGTAGCTTAGTAACAATGGACCAAGACCATTAATATCAAAGGCAGTTTTGTTGCTCTACATGGATTTTTTGTCTGAAGTGCTAAACGAGTTGCTATTTGGTTTGGACTAATATGTCTGATAGAATTGTGATTTAGATCCGATTCAGCTAAATGGAGTTTTACCTCACATTAATTTCAATATGTGACCATAGCTAATATTTGCGGTTGGAGGCAGTGTTACCCCCCATTCATTTGCTCTCTTATTCCATCTGCTGTTGTGCTCCACTGGTGACTTCACACTGACTGAATTATGCTCCCAATACGCTGATCGCCAGTTTTTCTCCACCTGATGTTAGATCCATTGAGGTGTATGCTTTGACTCAGTTTTGAAAGGTTAAAGCCTGGTCTGTTCCAGTTTGTACTGCCTACAAGTCCAGCAAATTTATTCTGCTTCTAAAAGAGTAGATAGAACTAACATTAATTTCTATGTTTAAATACATGTAGACAACTTTACAAACTCTCCACTGCTTTTCCATTTAGCAGATGTTTAAAGGATACGTCTGGTAATGTCCTATATTTATATCTTATTGTCAGCAAATCCCGTGATCCCAAATaccaacacaaacaataaaCTGACTTATGTGCCATATGCCTACAATGCATATTGTGGCccaaaaaactattaaaatacaGTCTAATACAATAAGAAGTGGgcattgtagtttattttgagtcaatctCACAAACACCTGAGTCCTGGGTGCGTAaatactcactcacacaccaaATGTGTAATAAACAGCAGCTGCAAATAGACCC

Function

symbol description
pth1r Enables parathyroid hormone receptor activity and peptide hormone binding activity. Acts upstream of or within dorsal aorta development and positive regulation of inositol phosphate biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including bone tissue; gill; liver; opercular flap; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in Eiken syndrome; Jansen's metaphyseal chondrodysplasia; chondrodysplasia Blomstrand type; osteochondrodysplasia; and primary failure of tooth eruption. Orthologous to human PTH1R (parathyroid hormone 1 receptor).

NR:

description
parathyroid hormone/parathyroid hormone-related peptide receptor-like

GO: NA

KEGG:

id description
K04585 PTHR1; parathyroid hormone receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816305.1 True 5469 mRNA 0.41 13 20935435 20983609

Neighbor

gene id symbol gene type direction distance location
usp14 usp14,LOC102778130 coding upstream 142936 20782255 ~ 20792499 (+)
rock1 rock1 coding upstream 155690 20741261 ~ 20779745 (+)
abhd3 abhd3 coding upstream 245805 20677357 ~ 20689630 (+)
npc1 npc1 coding upstream 411896 20507410 ~ 20523539 (+)
egfra LOC103369338 coding upstream 431159 20461791 ~ 20504276 (+)
LOC120567629 NA coding downstream 33293 21016902 ~ 21019325 (+)
gjc2 gjc2 coding downstream 42891 21026500 ~ 21045564 (+)
iba57 iba57 coding downstream 64745 21048354 ~ 21051342 (+)
snap47 snap47 coding downstream 69772 21053381 ~ 21059750 (+)
wnt3a wnt3a coding downstream 180111 21163720 ~ 21178831 (+)
G116514 NA non-coding upstream 54439 20880692 ~ 20880996 (+)
G116507 NA non-coding upstream 107200 20827876 ~ 20828235 (+)
G116465 NA non-coding upstream 236226 20696904 ~ 20699209 (+)
G116464 NA non-coding upstream 238962 20693420 ~ 20696473 (+)
G116463 NA non-coding upstream 242294 20692887 ~ 20693141 (+)
G116538 NA non-coding downstream 38022 21021631 ~ 21030496 (+)
G116583 wnt9a non-coding downstream 145999 21129608 ~ 21134012 (+)
G116616 NA non-coding downstream 260032 21243641 ~ 21244393 (+)
G116657 NA non-coding downstream 287142 21270751 ~ 21326263 (+)
G116723 NA non-coding downstream 470721 21454330 ~ 21500394 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 20113 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 559802 20373227 ~ 20375633 (+)
emilin2a NA other upstream 1470054 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 1883193 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 2209988 18720365 ~ 18725447 (+)
LOC120568354 NA other downstream 887344 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 1624440 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 1657901 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 2450016 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 2609123 23592732 ~ 23685804 (+)

Expression


Co-expression Network