LOC120568679


Basic Information

Item Value
gene id LOC120568679
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13213316 ~ 13223854 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816335.1
ATCTTCTTTGTTTATGCTTTTAAGGTTGTTGTACTCCCGCGTAGTTATCAGGTTCTTTTCATGAACTTTGTTGAGCATTAGCCTGTGGTCTCCACATAAAGTCGCCTGAATGGCTGTCTTATTACGTCTCACCGTGTCTTTGGCTGGCATGCTGAATCTGACAAAGAGAActagagacagaaagaagagAAATGTGTCATTGTCTTCAGTCCAACACCGACAGTCAGCGACTGAGTGGACGGACAGCAGGAGATTGGCTATGAAGCTGTTTCCTGTCCATTCAATACTTTGGTCCAGTTTGCTGGTTTTGTGTGCCTCACAAAATGAGACAGAGGCCATCAATCCAGATGTCTGTCCTGATGACCATGGCAATATCTATCCACACATTTCTTCAGACCCAGGACATGACGTAGAGGAGGATACGGTGGATGCAAAAAACTTTCACTGCCTCTTTTACCCAACAAATATACTCAACTGCTCCTGGTCATTTCCCACTTTGCAAAAGGATACTCAGATCTTTGTCAATATCAgtgtgtgtgatgatcGTGGAGCAGGTCCCGCTCTGAACCTTTCGTCTGAGGAGAGAGTCGGATCGATGTCTTCATTTCTGCACGCGTACGATGGGTTGTATGTAATCCTCCATTTTAACCTAACCCTGCACGACAAGTGGACAGTCTACATCAGCCCTTTCGACATCAACAAGCTAGAGGTCCTGTCTCCACCCCCAAACATCTCTGCATCAGTCAAAGATGAAGGACTGGTAGTGACATGGGGTCTACCCCACAGTCGTGTAAACCCTCACTCCCATTGCTTTGAATACCAGCTAGACATGGGCGACCAGgaaagatTCAAAACCTTAACCAACAAGCTGTTATATATAGAACCCAGTCCAGATCCTAACAGAACCTACAATGTGAGGATGAGAACGAGAATGAGTGCCATGTGCCAACAATCTGCTCAGTGGAGTGACTGGAGTCACACCGTCAcGGTGAAACGGTCATTTTACAAACTCAACACTCTGGTCATCATCTCAATTTCACTTGGAATACCCATGATCCTCCTGGCTGCGCTGCTGCTGGTGCGCCATCAGAGggTATCTAAGGTTTTGTTTCCTCAGATTCCTTGCCCCCCGCCAAAGTACAAATATTTCCtggaaaaaaatgacacatttaaTCTCTTCCACCCTGCCCCATCAGCTGAGCCTGTAGAGGAGATCACAGAGGTGGAGGACACAGAACTAAAGCCTCGATAGATATAATAAAAGCAATATGTGAAGGACACATTCATATTACATTAAGTTATGGTTTTATTTTGCTAATGTCTTTTATAGCCTTAGCCAGCAAAGCAAGTTTGTTCAAGTTATATGTGACTCTTGTGACATGTAAAAGTATACCAATATGACTGCAAAACATGCTAAGGATCTCAAATTTAGGGAGCTTTTGCTCTGCTTGTTCATGGACTTCTTATTACTGAAACAAAGGGAATGTGTCAGTTGATGAGTTTTGATGAAATACGTTTGCTCTGCCTGAACTAGCTGATGAGCTAGTTCTGAAATGTAAACCTTTTTGCTGTGAAATAAAGATTAGTGATGCACTAATA
>XM_039816336.1
TGCAGGCTCTGAGGGAAGTGGGGCATATTCAAGTTTGAACGTGAAACGCCACAAATAAATGTGTCATTGTCTTCAGTCCAACACCGACAGTCAGCGACTGAGTGGACGGACAGCAGGAGATTGGCTATGAAGCTGTTTCCTGTCCATTCAATACTTTGGTCCAGTTTGCTGGTTTTGTGTGCCTCACAAAATGAGACAGAGGCCATCAATCCAGATGTCTGTCCTGATGACCATGGCAATATCTATCCACACATTTCTTCAGACCCAGGACATGACGTAGAGGAGGATACGGTGGATGCAAAAAACTTTCACTGCCTCTTTTACCCAACAAATATACTCAACTGCTCCTGGTCATTTCCCACTTTGCAAAAGGATACTCAGATCTTTGTCAATATCAgtgtgtgtgatgatcGTGGAGCAGGTCCCGCTCTGAACCTTTCGTCTGAGGAGAGAGTCGGATCGATGTCTTCATTTCTGCACGCGTACGATGGGTTGTATGTAATCCTCCATTTTAACCTAACCCTGCACGACAAGTGGACAGTCTACATCAGCCCTTTCGACATCAACAAGCTAGAGGTCCTGTCTCCACCCCCAAACATCTCTGCATCAGTCAAAGATGAAGGACTGGTAGTGACATGGGGTCTACCCCACAGTCGTGTAAACCCTCACTCCCATTGCTTTGAATACCAGCTAGACATGGGCGACCAGgaaagatTCAAAACCTTAACCAACAAGCTGTTATATATAGAACCCAGTCCAGATCCTAACAGAACCTACAATGTGAGGATGAGAACGAGAATGAGTGCCATGTGCCAACAATCTGCTCAGTGGAGTGACTGGAGTCACACCGTCAcGGTGAAACGGTCATTTTACAAACTCAACACTCTGGTCATCATCTCAATTTCACTTGGAATACCCATGATCCTCCTGGCTGCGCTGCTGCTGGTGCGCCATCAGAGggTATCTAAGGTTTTGTTTCCTCAGATTCCTTGCCCCCCGCCAAAGTACAAATATTTCCtggaaaaaaatgacacatttaaTCTCTTCCACCCTGCCCCATCAGCTGAGCCTGTAGAGGAGATCACAGAGGTGGAGGACACAGAACTAAAGCCTCGATAGATATAATAAAAGCAATATGTGAAGGACACATTCATATTACATTAAGTTATGGTTTTATTTTGCTAATGTCTTTTATAGCCTTAGCCAGCAAAGCAAGTTTGTTCAAGTTATATGTGACTCTTGTGACATGTAAAAGTATACCAATATGACTGCAAAACATGCTAAGGATCTCAAATTTAGGGAGCTTTTGCTCTGCTTGTTCATGGACTTCTTATTACTGAAACAAAGGGAATGTGTCAGTTGATGAGTTTTGATGAAATACGTTTGCTCTGCCTGAACTAGCTGATGAGCTAGTTCTGAAATGTAAACCTTTTTGCTGTGAAATAAAGATTAGTGATGCACTAATA
>XM_039816338.1
GGTCCTTACCCTAACAAAGAAATGTGTCATTGTCTTCAGTCCAACACCGACAGTCAGCGACTGAGTGGACGGACAGCAGGAGATTGGCTATGAAGCTGTTTCCTGTCCATTCAATACTTTGGTCCAGTTTGCTGGTTTTGTGTGCCTCACAAAATGAGACAGAGGCCATCAATCCAGATGTCTGTCCTGATGACCATGGCAATATCTATCCACACATTTCTTCAGACCCAGGACATGACGTAGAGGAGGATACGGTGGATGCAAAAAACTTTCACTGCCTCTTTTACCCAACAAATATACTCAACTGCTCCTGGTCATTTCCCACTTTGCAAAAGGATACTCAGATCTTTGTCAATATCAgtgtgtgtgatgatcGTGGAGCAGGTCCCGCTCTGAACCTTTCGTCTGAGGAGAGAGTCGGATCGATGTCTTCATTTCTGCACGCGTACGATGGGTTGTATGTAATCCTCCATTTTAACCTAACCCTGCACGACAAGTGGACAGTCTACATCAGCCCTTTCGACATCAACAAGCTAGAGGTCCTGTCTCCACCCCCAAACATCTCTGCATCAGTCAAAGATGAAGGACTGGTAGTGACATGGGGTCTACCCCACAGTCGTGTAAACCCTCACTCCCATTGCTTTGAATACCAGCTAGACATGGGCGACCAGgaaagatTCAAAACCTTAACCAACAAGCTGTTATATATAGAACCCAGTCCAGATCCTAACAGAACCTACAATGTGAGGATGAGAACGAGAATGAGTGCCATGTGCCAACAATCTGCTCAGTGGAGTGACTGGAGTCACACCGTCAcGGTGAAACGGTCATTTTACAAACTCAACACTCTGGTCATCATCTCAATTTCACTTGGAATACCCATGATCCTCCTGGCTGCGCTGCTGCTGGTGCGCCATCAGAGggTATCTAAGGTTTTGTTTCCTCAGATTCCTTGCCCCCCGCCAAAGTACAAATATTTCCtggaaaaaaatgacacatttaaTCTCTTCCACCCTGCCCCATCAGCTGAGCCTGTAGAGGAGATCACAGAGGTGGAGGACACAGAACTAAAGCCTCGATAGATATAATAAAAGCAATATGTGAAGGACACATTCATATTACATTAAGTTATGGTTTTATTTTGCTAATGTCTTTTATAGCCTTAGCCAGCAAAGCAAGTTTGTTCAAGTTATATGTGACTCTTGTGACATGTAAAAGTATACCAATATGACTGCAAAACATGCTAAGGATCTCAAATTTAGGGAGCTTTTGCTCTGCTTGTTCATGGACTTCTTATTACTGAAACAAAGGGAATGTGTCAGTTGATGAGTTTTGATGAAATACGTTTGCTCTGCCTGAACTAGCTGATGAGCTAGTTCTGAAATGTAAACCTTTTTGCTGTGAAATAAAGATTAGTGATGCACTAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816335.1 True 1599 mRNA 0.44 11 13216960 13223854
XM_039816336.1 False 1466 mRNA 0.44 11 13213316 13223854
XM_039816338.1 False 1429 mRNA 0.44 11 13217658 13223854

Neighbor

gene id symbol gene type direction distance location
mcm6 mcm6,LOC106569474 coding upstream 30109 13176825 ~ 13183207 (+)
LOC120569132 LOC104948641,LOC103362219,LOC104938220,LOC103396234 coding upstream 46485 13163839 ~ 13166831 (+)
si:ch211-227n13.3 NA coding upstream 49798 13159016 ~ 13163518 (+)
pecr pecr coding upstream 90643 13118569 ~ 13122673 (+)
orc2 LOC102787487 coding upstream 101052 13106699 ~ 13112264 (+)
LOC120568782 pcdh8 coding downstream 50308 13274162 ~ 13278429 (+)
LOC120568688 lect1 coding downstream 55222 13279076 ~ 13286178 (+)
LOC120567765 NA coding downstream 165367 13389221 ~ 13392603 (+)
LOC120568628 LOC103354350,LOC103478943,LOC107086843,LOC100704451,LOC101473770 coding downstream 170634 13394488 ~ 13410455 (+)
LOC120568788 gorasp2,LOC103354349,LOC101074307,LOC105930246,LOC106513812 coding downstream 188099 13411953 ~ 13420965 (+)
G114037 NA non-coding upstream 6293 13204825 ~ 13207023 (+)
G114035 NA non-coding upstream 12570 13199768 ~ 13200746 (+)
G114033 NA non-coding upstream 14582 13196261 ~ 13198734 (+)
G114008 LOC104953400 non-coding upstream 59722 13152099 ~ 13153594 (+)
G114000 NA non-coding upstream 185146 13027079 ~ 13028170 (+)
LOC120568783 NA non-coding downstream 26897 13250751 ~ 13254585 (+)
G114055 NA non-coding downstream 62796 13286650 ~ 13287219 (+)
G114032 NA non-coding downstream 64339 13288193 ~ 13289003 (+)
G114063 NA non-coding downstream 130400 13354254 ~ 13356050 (+)
G114094 NA non-coding downstream 245657 13469511 ~ 13472357 (+)
si:ch73-71c20.5 NA other upstream 26952 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 87853 13123030 ~ 13125463 (+)
rpl37a rpl37a,RPL37A other upstream 95960 13114596 ~ 13117356 (+)
col6a1 col6a1 other upstream 138722 13010575 ~ 13074594 (+)
G113979 LOC104959684 other upstream 237679 12929215 ~ 12975637 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other downstream 1063296 14287150 ~ 14295993 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 1761923 14985777 ~ 14993083 (+)
ro60 trove2 other downstream 1789889 15013743 ~ 15026208 (+)
G114789 NA other downstream 1927942 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 2114703 15338557 ~ 15368780 (+)

Expression


Co-expression Network