LOC120568684


Basic Information

Item Value
gene id LOC120568684
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18680600 ~ 18682419 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816349.1
TATAAAAACTGCACCAAAACTCAGAACTTCACTGCTACCCGGTAAGACAGgttgtaaaaaaaagatgaacaCCATCCAGGTGATTTCCCTTACCCTGCTGTCCGTTCTGGCGGCCAATGCTCAGTTCATCATGCCAGGAAGATGCCCCAAGCCTGCTGTTCAAGAGGACTTTGATGCTACCAGGTATGTTGGTAAGTGGTATGATATCCAGAGACTGCCAAATACCTTCCAGAAGGGGGAGTGCGCCACTGCCACCTACACCTTGAGCCCTGGATTTGGATTTGGTGCTCTCAACAGAGAGCTGCTTGCTGATGGGACCATTATATCCGTCATTGCCTCTGCCATAGCAGAAGATCCCTCTGAGCCTGCTAAGCTGCAGATCTTTTATGAGAACGATGCCCCTGTTCCTTACTGGGTTCTGTCCACCGACTACGACAACTACGCTCTGGTCTACAGCTGCATCGAACTCGGGGCGATGCACGCGGCACATGCCAGTATCTTGAGCAGGCAGCCCACCCTGCTTGAGGAGACAATCAAGGAGCTACATGGCACCCTGTCCTCTTTTGGAGTCGGAGTGGATAAGCTGCTCACCACCAACCAGGATGCAGCTTCCTGCAGCGCCATGAACCAGTAAACAGATTGAGATAGTCTCTACAGATTGTGGTGCATTGTGGTGCTTTTGATTGTACTTTCACTGTTTGTTTCAAACTAAGTCAATGCAATAAACTTATTTTATCGGCA
>XM_039816350.1
GACAGGTAAGCAAGTAGCAGgttgtaaaaaaaagatgaacaCCATCCAGGTGATTTCCCTTACCCTGCTGTCCGTTCTGGCGGCCAATGCTCAGTTCATCATGCCAGGAAGATGCCCCAAGCCTGCTGTTCAAGAGGACTTTGATGCTACCAGGTATGTTGGTAAGTGGTATGATATCCAGAGACTGCCAAATACCTTCCAGAAGGGGGAGTGCGCCACTGCCACCTACACCTTGAGCCCTGGATTTGGATTTGGTGCTCTCAACAGAGAGCTGCTTGCTGATGGGACCATTATATCCGTCATTGCCTCTGCCATAGCAGAAGATCCCTCTGAGCCTGCTAAGCTGCAGATCTTTTATGAGAACGATGCCCCTGTTCCTTACTGGGTTCTGTCCACCGACTACGACAACTACGCTCTGGTCTACAGCTGCATCGAACTCGGGGCGATGCACGCGGCACATGCCAGTATCTTGAGCAGGCAGCCCACCCTGCTTGAGGAGACAATCAAGGAGCTACATGGCACCCTGTCCTCTTTTGGAGTCGGAGTGGATAAGCTGCTCACCACCAACCAGGATGCAGCTTCCTGCAGCGCCATGAACCAGTAAACAGATTGAGATAGTCTCTACAGATTGTGGTGCATTGTGGTGCTTTTGATTGTACTTTCACTGTTTGTTTCAAACTAAGTCAATGCAATAAACTTATTTTATCGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816349.1 True 741 mRNA 0.49 5 18680600 18682419
XM_039816350.1 False 711 mRNA 0.50 5 18680645 18682419

Neighbor

gene id symbol gene type direction distance location
nadkb LOC103353035,LOC102782138,LOC101483211,LOC102289018 coding upstream 55423 18609213 ~ 18625177 (+)
prkci prkci coding upstream 124240 18521969 ~ 18556360 (+)
dapk3 dapk3,LOC102784251 coding upstream 174933 18496691 ~ 18505667 (+)
arhgef18a NA coding upstream 200879 18466050 ~ 18479721 (+)
insra insr coding upstream 226635 18394984 ~ 18453965 (+)
LOC120568690 NA coding downstream 17063 18699482 ~ 18701227 (+)
apoda.1 LOC103353029,LOC104955147,LOC101484702,LOC102313692,LOC102209340 coding downstream 33939 18716358 ~ 18718511 (+)
and2 LOC103353068 coding downstream 48309 18730728 ~ 18737190 (+)
LOC120568945 LOC101485289,LOC100699127 coding downstream 73787 18756206 ~ 18799833 (+)
lrrcc1 lrrcc1 coding downstream 121232 18803651 ~ 18820386 (+)
G115856 samd7 non-coding upstream 30796 18648774 ~ 18649804 (+)
G115826 sec62 non-coding upstream 34217 18632716 ~ 18646383 (+)
G115793 NA non-coding upstream 190414 18488531 ~ 18490186 (+)
LOC120567854 NA non-coding upstream 215150 18458181 ~ 18465450 (+)
G115781 NA non-coding upstream 224980 18454033 ~ 18455620 (+)
G115862 NA non-coding downstream 1295 18683714 ~ 18684465 (+)
LOC120568663 NA non-coding downstream 7215 18689634 ~ 18692121 (+)
G115863 NA non-coding downstream 10586 18693005 ~ 18694301 (+)
G115864 NA non-coding downstream 11972 18694391 ~ 18694646 (+)
G115889 NA non-coding downstream 151124 18833543 ~ 18833742 (+)
LOC120568691 NA other upstream 6460 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 78337 18566633 ~ 18602263 (+)
G115729 NA other upstream 326256 18305149 ~ 18354344 (+)
LOC120567767 NA other upstream 650705 18027280 ~ 18029895 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 1197047 17406497 ~ 17483553 (+)
LOC120568911 NA other downstream 37946 18720365 ~ 18725447 (+)
LOC120568770 NA other downstream 334620 19017039 ~ 19052242 (+)
emilin2a NA other downstream 764592 19447011 ~ 19465381 (+)
LOC120567833 gbg5 other downstream 1690808 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 2200198 20882617 ~ 20915322 (+)

Expression


Co-expression Network