slc1a7a (slc1a7,LOC102202224,LOC106935810,LOC103140015,LOC108238248,LOC103363977)


Basic Information

Item Value
gene id slc1a7a
gene name slc1a7,LOC102202224,LOC106935810,LOC103140015,LOC108238248,LOC103363977
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14576354 ~ 14618876 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816352.1
cagacagacacatatagacacagatAAAGAGTGTGTGATGCTCTTAGTCTCATGTGGAATAATCAAGGAAGCAGCTCAGAAAAGGAACACAGAAACTCCTGAAGTGCTTTATTTTTGGACGACTACCTCCTTAATTTGACTTTTCACCTCCCTCCGTTAAGCAGATCCcaaccttttttgttttctttgaactTTTTCTTTCTAATTTCTTTCTTCTGTCTCAATCCCACCTTCTCCTTCAGTAGTCTGCATCCTTGCCCCACCTGCTGTGTCCACACTTTTCTATTTCTTCCGGAGTGGTGGCGGCTGTTGGCTCTCTGCTGATTCTAGATGGCTGAATAAGTGGTAAAAAGGTGGGGGGGGGCCTGCTCTGGTGGTTTTGCTGCCGGGGGTTTGCGAAGTTGCAGTCAGGACCAGGacaagcaggaggaggaggtggtggaggaggatggCGGTGGCTCTGGACGAAGTGTGGGGGCGGGTGAAGAATGTCTGCAAACAGAACGGACTACTCATCCTGTCTGTGCTGGCCGTGGTCATTGGCTGCCTGCTGGGCTTCTTCCTCAGAGGCAAGCAGCTCTCTGAGCAGGAGGTGAAGTACTTCCAGTTTCCTGGAGAGCTGCTGATGAGGATgttgaaaatgttaattttgcccCTTGTCGTATCCAGTTTGATGTCAGGTTTGGCTGCATTGGACGCCAAGTGCTCCAGCCGCCTGGGCATCATGACCATCTCCTACTACCTCTGGACCACCTTTGTTGCCGTGGTCGTGGGCATTCTCATGGTATACATCATCCACCCGGGTGGAGCTGCTCAAAAGGAGGACTCTGATGAGAGCAAGAAGCCAATGACCAGCTCTGCTGACGCTCTGCTGGATCTCATCCGCAACATGTTTCCAGCCAACCTGGTTCAAGCCACTTTTCAACAGTATCGAACCCAGAGAGTCCCTGAGCTCATCCCCAAACCAACGGTGGCTCAGCTCCTGGATGAGACCACTACGCGCAGGGTCTACATCTACGGCATCCAGGATGACAACGGCACAGATGTCCAGAATTTCTCCCTGGATCTTACGCCACCACCTGATGTCATCATGAAAACATCACCTGGTACCAGCGAAGGCATGAACGTGCTGGGGATTGTAATTTTTTCTGCTACCATGGGAATAATGTTAGGAAGAATGGGACCCAATGGAAGCGCTTTGGTCAACTTCTGCCAAAGTGTGAATGAGGCAGTTTTGAAGATTGTTGCCATTGTCATCTGGTATTTCCCCTTTGGGATCGTGTTTCTGGTTGCCGGTAAGATCTTGGAGATGGACGACCCTTCAGCCATGGGGAAGAAGCTGGGTTTTTACGCCATTACGGTGGTAATGGGCTTGGTGCTACACGGTCTATTCATCCTCCCGGCCATGTACTTTTTCATCACTAAGAAGAGCCCTATTGTTTACATCAGAGGCATTCTGCAGGCCCTGCTCATCTCCTTGGCCACCTCCTCCAGCTCTGCCACTCTGCCTATCACCTTCAAGTGCCTCCTTGAGAACAACCACATCGACAGACGCATCATCCGCTTCGTGCTGCCTGTCGGGGCCACCATCAATATGGACGGCACCGCACTCTACGAGGCCGTGGCAGCCATCTTCATCGCCCAAGTGAATAATTATGAGCTTGACTTTGGACAGATCATCACAATCAGCATCACTGCCACTGCAGCCAGTATCGGTGCAGCAGGAATCCCACAGGCTGGACTCGTAACCATGGTGATCGTGCTGACCTCTGTGGGTCTGCCCACCGATGACATCACTCTCATAATTGCTGTTGACTGGGCTTTGGATCGATTCAGGACCATGGTCAATGTGATGGGTGACGCACTGGCCACAGGCATTATGGCTCATATCTGCAGAAAAGATTTTGTCAAAGAAGGGGAGCAGGTGCCTCTGATCTGTGAAACTAAGCCAATGATAAGCATCCAGCAGATGATGACCTACCAGAACCAGAAGAATGGCTGCTACCAGCCGCCTCCACCAGGCAGCAAGCAGGGCCACCTCTCCCCGGACGTGGCTCGCCTGATGCAGCTGGAGGAGGGCATCCGGCCGCTAGAGAGGAAGAAACACGCTCACTCCTCTCACCACAAGAGGGAGCACAGGGACAAGGACCACTGTTCCGTTGATATGAATGGGCTGGAGACTAACGTATAGAAGCAGCTGCCCTGCTAACAGCTACTGGCACGTCTACAGCTGCAGGAGACGAGGACAAATTAAAGATTGAGGTGACTCACGCTTTTTCCCCTCCGAGAAGGAGAGCAGCCCAGGGTGGATGAATGTAGATGAccctgggaaaaaaaacaagacaatttttctttttctacatAACCTAAATAATGACCTGcatttcattgtgtgtgtatgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtacatattcATCAGAGATGTATTATATGTTACAAGCAGTGACTGCTACTCTGCTCTAGCTGAAGGACATTTCAAACCCGAGAGCTGATGCCCATCCCAAAGGAGCGGAAATAGCGAACACAATAGCAGATATAATTAAAGAAACCTATCCCTTTGTGGACtgtgggggaggggagggtg

Function

symbol description
slc1a7 Predicted to enable anion transmembrane transporter activity. Involved in neurotransmitter reuptake. Predicted to be integral component of postsynaptic membrane. Predicted to be active in glutamatergic synapse. Predicted to be integral component of presynaptic membrane.

NR:

description
LOW QUALITY PROTEIN: excitatory amino acid transporter 5-like

GO:

id name namespace
GO:0006835 dicarboxylic acid transport biological_process
GO:0035725 sodium ion transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0017153 sodium molecular_function

KEGG:

id description
K05618 SLC1A7, EAAT5; solute carrier family 1 (glutamate transporter), member 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816352.1 True 2632 mRNA 0.51 11 14576354 14618876

Neighbor

gene id symbol gene type direction distance location
tmem125b LOC103364166,LOC104960834,LOC100711868 coding upstream 25323 14549367 ~ 14551031 (+)
LOC120568347 NA coding upstream 122119 14440869 ~ 14454235 (+)
LOC120568146 LOC103364811,LOC100690866 coding upstream 235708 14330591 ~ 14340646 (+)
mgst3a mgst3 coding upstream 254967 14318675 ~ 14321387 (+)
LOC120568001 jun,LOC104967900 coding upstream 316666 14257559 ~ 14259688 (+)
aldh9a1b LOC103363560,LOC101480450 coding downstream 48505 14667381 ~ 14674289 (+)
LOC120567643 nasp,LOC106919017,LOC106954312,LOC103140078,LOC102234216,LOC103479004,LOC103399366 coding downstream 68886 14687762 ~ 14692836 (+)
LOC120567645 tmem69,LOC102301864,LOC101478278 coding downstream 89637 14708513 ~ 14709821 (+)
sgip1b sgip1,LOC104955871,LOC102197882 coding downstream 134066 14752942 ~ 14774303 (+)
dynlt5 tctex1d1,LOC100691399 coding downstream 159080 14777956 ~ 14779867 (+)
G114550 NA non-coding upstream 15677 14558365 ~ 14560677 (+)
G114488 NA non-coding upstream 235013 14337822 ~ 14341341 (+)
G114429 NA non-coding upstream 261721 14314303 ~ 14314633 (+)
G114428 NA non-coding upstream 262339 14313602 ~ 14314015 (+)
G114406 NA non-coding upstream 342142 14191963 ~ 14234212 (+)
G114561 NA non-coding downstream 7291 14626167 ~ 14626770 (+)
G114585 NA non-coding downstream 74690 14693566 ~ 14693902 (+)
G114650 NA non-coding downstream 192786 14811662 ~ 14812209 (+)
G114745 NA non-coding downstream 446214 15065090 ~ 15065393 (+)
G114746 NA non-coding downstream 447247 15066123 ~ 15066439 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other upstream 280361 14287150 ~ 14295993 (+)
si:ch73-71c20.5 NA other upstream 1389990 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 1450891 13123030 ~ 13125463 (+)
rpl37a rpl37a,RPL37A other upstream 1458998 13114596 ~ 13117356 (+)
col6a1 col6a1 other upstream 1501760 13010575 ~ 13074594 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 366901 14985777 ~ 14993083 (+)
ro60 trove2 other downstream 394867 15013743 ~ 15026208 (+)
G114789 NA other downstream 532920 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 719681 15338557 ~ 15368780 (+)
asip2b agrp2,LOC105941385,LOC102299529,LOC102795060,LOC103358555 other downstream 853826 15472702 ~ 15478462 (+)

Expression


Co-expression Network