LOC120568690


Basic Information

Item Value
gene id LOC120568690
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18699482 ~ 18701227 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816358.1
TATAAAAACTGCACCAAAACTCAGAACTTCACTGCTACCCGGTAAGACAGgttgtaaaaaaaagatgaacaCCATCCAGGTGATTTCCCTGACCCTGCTGTCCGTTCTGGTGGCCAACGCTCAGTTCATCATGCCAGGAAGATGCCCCAAGCCTGCTGTTCAAGAGGACTTTGATGCTACCAGGTATGTTGGTAAGTGGTATGATATCCAGAGACTGCCAAATACCTTCCAGAAGGGGGAGTGCGCCACGGCCACCTACACCTTGAGCCCTGGATTTGGATTTGGTGCTCTCAACAGAGAGCTGCTTGCTGATGGGACCATTATATCCGTCATTGCCTCTGCCATAGCAGAAGATCCCTCTGAGCCTGCTAAGCTGCAGATCTTTTATGAGAACGATGCCCCTGTTCCTTACTGGGTGCTGTCCACCGACTACGACAACTACGCTCTGGTCTACAGCTGCATTGAACTCGGGGCGATGCATGCGGCACATGCCAGTATCTTGAGCAGGCAGCCCACCCTGCCTGAGGAGACAATCAAGGAGCTACATGGCACCCTGTCCTCTTTTGGAGTCGGAGTGGATAAGCTGCTCACCACCAACCAGGATACAGCTTCCTGCAGCGCCATGAACCAGTAAACAGATTGAGATAGTCTCTACAGATTGTGGTGCATTGTGGTGCTTTTGATTGTACTTTCACTGTTTGTTTCAAACTAAGTCAATAATGCAATAAACTTATTTTATCGGCA
>XM_039816359.1
GACAGGTAAGCAAGTAGCAGgttgtaaaaaaaagatgaacaCCATCCAGGTGATTTCCCTGACCCTGCTGTCCGTTCTGGTGGCCAACGCTCAGTTCATCATGCCAGGAAGATGCCCCAAGCCTGCTGTTCAAGAGGACTTTGATGCTACCAGGTATGTTGGTAAGTGGTATGATATCCAGAGACTGCCAAATACCTTCCAGAAGGGGGAGTGCGCCACGGCCACCTACACCTTGAGCCCTGGATTTGGATTTGGTGCTCTCAACAGAGAGCTGCTTGCTGATGGGACCATTATATCCGTCATTGCCTCTGCCATAGCAGAAGATCCCTCTGAGCCTGCTAAGCTGCAGATCTTTTATGAGAACGATGCCCCTGTTCCTTACTGGGTGCTGTCCACCGACTACGACAACTACGCTCTGGTCTACAGCTGCATTGAACTCGGGGCGATGCATGCGGCACATGCCAGTATCTTGAGCAGGCAGCCCACCCTGCCTGAGGAGACAATCAAGGAGCTACATGGCACCCTGTCCTCTTTTGGAGTCGGAGTGGATAAGCTGCTCACCACCAACCAGGATACAGCTTCCTGCAGCGCCATGAACCAGTAAACAGATTGAGATAGTCTCTACAGATTGTGGTGCATTGTGGTGCTTTTGATTGTACTTTCACTGTTTGTTTCAAACTAAGTCAATAATGCAATAAACTTATTTTATCGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816358.1 True 744 mRNA 0.49 5 18699482 18701227
XM_039816359.1 False 714 mRNA 0.50 5 18699527 18701227

Neighbor

gene id symbol gene type direction distance location
LOC120568684 NA coding upstream 17063 18680600 ~ 18682419 (+)
nadkb LOC103353035,LOC102782138,LOC101483211,LOC102289018 coding upstream 74305 18609213 ~ 18625177 (+)
prkci prkci coding upstream 143122 18521969 ~ 18556360 (+)
dapk3 dapk3,LOC102784251 coding upstream 193815 18496691 ~ 18505667 (+)
arhgef18a NA coding upstream 219761 18466050 ~ 18479721 (+)
apoda.1 LOC103353029,LOC104955147,LOC101484702,LOC102313692,LOC102209340 coding downstream 15131 18716358 ~ 18718511 (+)
and2 LOC103353068 coding downstream 29501 18730728 ~ 18737190 (+)
LOC120568945 LOC101485289,LOC100699127 coding downstream 54979 18756206 ~ 18799833 (+)
lrrcc1 lrrcc1 coding downstream 102424 18803651 ~ 18820386 (+)
e2f5 LOC100699665,LOC102779743 coding downstream 119869 18821096 ~ 18833039 (+)
G115864 NA non-coding upstream 4836 18694391 ~ 18694646 (+)
G115863 NA non-coding upstream 5181 18693005 ~ 18694301 (+)
LOC120568663 NA non-coding upstream 7361 18689634 ~ 18692121 (+)
G115862 NA non-coding upstream 15017 18683714 ~ 18684465 (+)
G115856 samd7 non-coding upstream 49678 18648774 ~ 18649804 (+)
G115889 NA non-coding downstream 132316 18833543 ~ 18833742 (+)
G115921 NA non-coding downstream 141345 18842572 ~ 18842794 (+)
G115923 NA non-coding downstream 163899 18865126 ~ 18866134 (+)
G115931 NA non-coding downstream 221526 18922753 ~ 18923170 (+)
G115934 NA non-coding downstream 230699 18931926 ~ 18933912 (+)
LOC120568691 NA other upstream 25342 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 97219 18566633 ~ 18602263 (+)
G115729 NA other upstream 345138 18305149 ~ 18354344 (+)
LOC120567767 NA other upstream 669587 18027280 ~ 18029895 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 1215929 17406497 ~ 17483553 (+)
LOC120568911 NA other downstream 19138 18720365 ~ 18725447 (+)
LOC120568770 NA other downstream 315812 19017039 ~ 19052242 (+)
emilin2a NA other downstream 745784 19447011 ~ 19465381 (+)
LOC120567833 gbg5 other downstream 1672000 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 2181390 20882617 ~ 20915322 (+)

Expression


Co-expression Network