mtf2 (mtf2)


Basic Information

Item Value
gene id mtf2
gene name mtf2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33682701 ~ 33698786 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816366.1
TCCCCGATCATCAGCGGGAAACCAAAATGGCGAACGTGCTTGGGGAAAATGAACCGTTTGTTATCTTCTGAAGAAGGCCAGAGCCCCGCAAGTTTCCGCGATATACTTTTGAAATAGATTCAACTGCAGAAGAAGCGGGATAACAGCGGTCGTTCCCattcagttttttgttgttgtacgAGTCATTTGTTGAAGAAGCGGAGGTGACCGAATGAGAGACTCAGGGGTTGTGGATCACCTGTCTGTCCATCACAGAGCTCTCccccagcggcagcagcaggctGTGTCCTTGTCCCCCTCAAGCCTTTCTGCTAGGGGGGAGTATGGAGAGGACGACATGTCTGACAGGTTCACAGAGGGACAGGACGTCTTGGCCCGGTGGTCAGATGGCTTGTTCTACTTGGGGACAATCACCAAGATAGATCGGGACAAGCAGCGATGCTTTGTGGTTTTTGAGGATCGGTCAAAGTCCTGGGTTCTGTGGAAGGATATCCAGACAGgggatgaagatgatgaagatgaggaTGATGACATTGTGTGCTCTATATGCCAAGACGAAACTTCAGATGAACCCAATGAAATTGTCATTTGTGACAAGTGTGGACAAGGCTACCATCAGCTGTGCCACACCCCCATCATTGATGCCTCTGTCATTGACTCTGATGACAAGTGGCTCTGCTCAGAGTGTGTGCTCACTTCTATACCTAAGAGGGGAGCCTCTGCTAAAGGTTTTCTGCCGCACGAGCAGCAGGAGCATATAGGGCTGCACCTGTCCCTCCCATACATTTTGGACGAACTGGTTTGGAACCAGGGCCACAAGACTAATATCCAACAGTGCTACTGCTACTGTGGAGGTCCAGGAGAttGGTACCTGAAGATGCTGCAGTGTAACGAGTGTGAGCAGTGGTTCCATGAGGCGTGTctacattgcttacagatgCCCATGCTCTATGGAGATAGGTTTTATCTGTTTATTTGTTCCGTTTGCAATGGTGGATCAGAGTTCCTCAGCCGACTGCCTCTTAGCTGGGAGGATGTCACACACCTGAGCCTGTACAACTTGAGTGTGATCCACAAGAAGAAGTACTTTGACTCTGAGATGGACCTGATGTCGTACATCAATGATACCtgggagctgctgcagctgggGGAGCTCGCCAACACTCCCAGATCAGAGCGATATCAATGTGTTCTGGAAGCattaaacaacaacagcagcatGTTCATGTCAGGGAAGGAAGTTAAGAAAAAGAAGCACTTGTTTGGGCTGAGGATCCGTTTCCCTCCTGCTCCACCCAACTCAGATGAGCCAACCAGCAGAGTGATGGAGAGGGCTTCACATGAGATCACTATCAAAGGATGCAAGTCCACCAAGGCTCTGTCTGGCATGAGAGCTTGCAGTACTTTAACCAATggcacagagaagaagaaaaagaagaagaaaaagaggaagcaaGGAGCACATTCTCTGGAGACTCTGGCTAAACCACAACACAGTGAACTCTTATCCCAgGAAGTAAGAAGGCCTCTGGAGCTCCACACATTGGATCACTTAACCTCTATCAAGAGTGAGAGGTCTCTGCTGTCTTCAGATGTGGAATCAATAGGAGCCCTGAGCACCACAGAAACTACCTCAACTAGCATTTCAAGACAGTCCAGCCTCTGTAGCTCCAGCAAGACCCGCACGACCGCCTGCATCATGCCTGTTTCCGCTCCACCCTTGAAGAGGAAACGTGGGCGGCCCCGACGGGCCCTGCAGCCCCCCAACCTGGAGATCCCCCCTCCTAGCCGTGCAGAGCCAAACCTCTCCGCTACGGAGATGCTGAGCCCACTCCCAGGGCTTCACTCCACAGACATAGTTCACGGCATGGACCCCAACAGCCAGCTCTCCCACCTCAAGAGCTCCATCAGCAGCTATTTCGGAGCAGCGGGGCGGCTGGCGTGCGGGGAAAAGTACAAAGTCCTGGCACGACGGGTCACCCTTGATGGCAAGGTGCAGTACCTGGTGGAGTGGGAAGGAGTCACTGCCTCCTAGACTTGTCTGTGTCTTCATCACTTCTGACTATTAACCAGCGCCTGCAGGAGGTTAATGGCGGTGCTAAGGACTTGTATACACAGCCTGTGTTCAGAGCATTAAATGATTTATGcctttttgtttagtttagaCAGGAGCAGCTTACTGCAAAGCCTACTGGTTCAGTGCACATTTAAACACGTCTTTTCCTCCTGTGTTTAAAGATTACAATTCATCGATAAAGATGAGGCATTGTCATTATACCACACCgtatttgtgttattatgcTTTTAACTTTCGTTTACGTTAACAGCAACCCCTATTTCTTCAGGGGGAAGCAATTGATTAGCGCACTGCACCTGTAGGCTTTCAGTGAATCGTTATTGTACCTAATTTTTAATCCAGTGATATGCTTTTCATTTCCAGACCAGTTAATCATGAAACTGTAAGCTTTTTTTGACAGAATGTAGTTGGTCAGGCATTAAATGGTAAATCTTGGATGATAAGAGCGAAGGGGAACCTTTcttctagggatgcaccgaatccagatgtTTGAGGTTAAATGCCgtatccactggttaagattctgccgaaaccgaatcctactcccatcctcagtccattaacaaaGTAAAGTTATGAATGaagtccttcctttgccgtacctgaagttgctgcattttagctgctgtctgtagattccttcatgcacaactcgtattctttcggatgtttcggaccaaatgttttaacagcagcgatgatgt

Function

symbol description
mtf2 Predicted to enable DNA binding activity; chromatin binding activity; and methylated histone binding activity. Predicted to be involved in chromatin organization and regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human MTF2 (metal response element binding transcription factor 2).

NR:

description
PREDICTED: metal-response element-binding transcription factor 2-like isoform X3

GO: NA

KEGG:

id description
K11485 MTF2, PCL2; metal regulatory transcription factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816366.1 True 2781 mRNA 0.49 15 33682701 33698786

Neighbor

gene id symbol gene type direction distance location
rpl5a LOC104920939,LOC100700425,LOC103149531,LOC106904255,LOC106958298,LOC107396374 coding upstream 20956 33657799 ~ 33661745 (+)
rpap2 NA coding upstream 39118 33622388 ~ 33643583 (+)
cdc7 cdc7 coding upstream 72098 33602063 ~ 33610603 (+)
hfm1 hfm1 coding upstream 81250 33574164 ~ 33601451 (+)
LOC120569066 NA coding upstream 122793 33551632 ~ 33559908 (+)
ccdc18 NA coding downstream 2846 33701632 ~ 33729640 (+)
scinlb LOC106958286,LOC106904251,LOC103149535 coding downstream 44473 33743259 ~ 33767779 (+)
wls wls coding downstream 70093 33768879 ~ 33809676 (+)
dmbx1a dmbx1,LOC102206215,LOC102778954,LOC100697381,LOC103354234 coding downstream 230281 33929067 ~ 33938778 (+)
ptger4c LOC104920997,LOC103353922,LOC100696844 coding downstream 306109 34004895 ~ 34007251 (+)
G119922 NA non-coding upstream 84044 33597873 ~ 33598657 (+)
G119901 NA non-coding upstream 120630 33538172 ~ 33562071 (+)
G119767 NA non-coding upstream 392121 33290330 ~ 33290580 (+)
G119763 NA non-coding upstream 413499 33268370 ~ 33269202 (+)
G119744 NA non-coding upstream 489502 33192587 ~ 33193199 (+)
LOC120569016 NA non-coding downstream 162652 33861438 ~ 33866996 (+)
LOC120569017 NA non-coding downstream 168609 33867395 ~ 33870784 (+)
G119961 NA non-coding downstream 168983 33867769 ~ 33868000 (+)
G119963 NA non-coding downstream 169600 33868386 ~ 33868686 (+)
G120058 pif1 non-coding downstream 277042 33975828 ~ 33976887 (+)
pkn2a pkn2 other upstream 167277 33477336 ~ 33515424 (+)
G119769 grk7,LOC106528614,LOC104920904 other upstream 374837 33304822 ~ 33307864 (+)
LOC120568463 NA other upstream 516601 33163916 ~ 33166100 (+)
tep1 LOC104950563,LOC104941471 other upstream 633620 32988817 ~ 33049081 (+)
G119585 NA other upstream 901230 32780988 ~ 32781471 (+)
gng12a gng12,LOC104920945,LOC104956611,LOC103354642 other downstream 112182 33810968 ~ 33851937 (+)
G119957 gadd45a,LOC106598934,LOC106568974 other downstream 159756 33858542 ~ 33859847 (+)
LOC120568585 LOC108244495 other downstream 256380 33955166 ~ 33957504 (+)
mrpl34 NA other downstream 465294 34164080 ~ 34165852 (+)
LOC120568953 dda1,LOC105024194,LOC106568965,LOC104920954 other downstream 468190 34166976 ~ 34172309 (+)

Expression


Co-expression Network