LOC120568699 (slc25a24,LOC104964315,LOC103357622)


Basic Information

Item Value
gene id LOC120568699
gene name slc25a24,LOC104964315,LOC103357622
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26580603 ~ 26588571 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816370.1
GCAGCAGTCTTCAACTATTGAAAATTGTGTCGTCTGGTGATCAGAACAAAGATGGGAGTCTCGACTTAAACGAGTTCAGCAAATATATGAAAGAGCACGAGAAGAAGCTGCTCCTGACATTCAAGAGTCTGGACAGAAACAACGATGGACGCATTGATGCCTCAGAGATCCAGCAGTCCCTTGCAGAGCTGGGCATGGATATCAGCAAAGAGAATGCCCTGAAAATATTACAGAGTATGGACAACGACGGGACCATGACGGTGGACTGGAACGAGTGGAGAGAACATTTCCTGTTATGCCCTGCTTACAACCTGGAAGAGATCATACGCCACTGGAAACACTCCTcgGTGCTGGACATAGGTGACAGTCTTGCCATCCCGGATGAATtcactgaggaggagaagaactCAGGTTGCTGGTGGAAGCACCTGGCTGCAGGTGCAGTGGCGGGGGCCGTCTCTCGCACTGGCACTGCCCCGCTGGACAGGATGAAAGTCTTCATGCAGGTTCATTCTTCTAAGACTAACCCAATAAGCCTGGGAGGGGGATTCAAGCAGATGATCATAGAGGGAGGTCTGACTTCACTGTGGAGGGGAAATGGCATCAACGTTTTAAAGATTGCACCTGAGACGGCAATCAAATTCATGGCATACGAACAATTTAAAAAGTTACTGTCATCAGAGGGCAAGACGATTGAGACACACAAGCGGTTTATGGCTGGCTCTCTGGCTGGAGCCACAGCACAGACAGCCATCTACCCAATGGAGGTATTGAAAACTAGACTGACCCTGAGGAAAACTGGCCAGTATTCAGGAATGTTTGATTGTGCCAAGAAGATCCTGAGGAAGGAGGGTCTCAGGGCTTTCTACAAGGGCTACATTCCAAACTTAGTGGGCATCATTCCCTACGCTGGGATAGACCTCGCTGTTTATGAGACTCTGAAGAACACGTGGCTGTCGTACCACCCTGACTCCCCTAACCCTGGAGTTCTGGTGTTGGTGGCCTGCGGGACCATGTCTAGTACCTGTGGCCAGCTGGCCAGCTATCCACTCGCACTTGTGCGCACACGGATGCAGGCACAAGCGTCCCTGGATGCATCAGACCAGTCCTCCATGACCAGTCTGATGAAGAAGATTGTAGCCAAAGATGGCTTTTTCGGACTCTACCGGGGCATCCTGCCAAACTTCATGAAAGTCATTCCCGCTGTCAGCATTAGCTATGTGGTTTACGAGTACATGAAGACTGGCTTAGGAATTTCCAAATGATGCAGCAAGCAAATGAACATTTACTTGTTTTACATATCTTACTACAGACTTGAAAATGCCTGAAAATAACTCCCAAGAAAACCTACGACGTTAAACATACAGAGCATGACTTCCACCAGCTGGCACAGGAGTTCAGTGGATGGAAAACTGTATGTATTCCACTAAAGGTCATCTGTCAGTAGCTAAACCATTTATCGTCCGTGCTGAGCATGCTTTAATTGTTATCCTGCTGTTACACATAACACACTCCCAAAATATGTACACCACCCAAAACAATATTAGACATAAAGAAAGTACTGTACTACATACAAGCAAAAACAGGATTTAGGATTGGTTGTTACATTTATCCTACTGTtattcttaaaaaaattctgttaACAAACCAAAAAGCTAGCTCAATGGGCCATACTGTTTTGATTTTTTGGTAAcagaataaatattttttaagagAAAGCTGAAGCTTATCCATTGGGGATACACCGCATCGTAAATCgtcttatttaaattaaaatgacactacaacagtttaaatgtttcaGCCCACACCCTTCAGAGGTAATTTAAGACTTTTCTAAGTTATAAACACCTTCCCCTAGAGTGACCTCAGCTCCAGACAGCAGCTGTCAACTAAAAATAACTGTCCCTGAAAAATCAATAACTTGTTTACACTGGAATACTGTGTGCCTGAAGAAAAATGCATATTGTGCAATGTGAAAATCACTAATTCTGTGTGTTATTTGATAATCATTTAAATGTGCCTTACAGCCAATCAATGTGAACTCTTTAACATCAACAGATGTGGTTTTTACTAtgcatatactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataatctGTTTTCAGTCATGACTATTTATGGATTTAAATTATGGTTACTACGTAACATGGTAACACTTAAACAGTTATAACTGGTCATTGGACTAAAATACTTGCAGGGAGCATG

Function

symbol description
slc25a24 Predicted to enable ATP transmembrane transporter activity and calcium ion binding activity. Predicted to be involved in several processes, including ATP transport; cellular response to calcium ion; and cellular response to oxidative stress. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrion. Predicted to be integral component of membrane. Is expressed in several structures, including Kupffer's vesicle; anterior axial hypoblast; hatching gland; periderm; and polster. Orthologous to human SLC25A24 (solute carrier family 25 member 24).

NR:

description
PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816370.1 True 2299 mRNA 0.44 10 26580603 26588571

Neighbor

gene id symbol gene type direction distance location
LOC120568740 NA coding upstream 14958 26559608 ~ 26565645 (+)
LOC120567674 NA coding upstream 20962 26554070 ~ 26559641 (+)
LOC120567673 NA coding upstream 27522 26534496 ~ 26553081 (+)
fndc7a NA coding upstream 44904 26524945 ~ 26535699 (+)
LOC120569037 NA coding upstream 59500 26508928 ~ 26521103 (+)
zgc:85843 tm6sf2,LOC104924838,LOC102294137,LOC102201647 coding downstream 77933 26666504 ~ 26672258 (+)
LOC120569005 LOC106935698,LOC103153539 coding downstream 203631 26792202 ~ 26813425 (+)
ndufa13 ndufa13,LOC102786334 coding downstream 227113 26815684 ~ 26819017 (+)
LOC120567603 LOC103357602,LOC108239446,LOC104948981,LOC105934574 coding downstream 302364 26890935 ~ 26899765 (+)
LOC120568413 LOC107384102,LOC105934594,LOC104929657,LOC103366675,LOC108239475,LOC103395958,LOC102222760 coding downstream 370095 26958666 ~ 26963795 (+)
G118009 NA non-coding upstream 265973 26314265 ~ 26314630 (+)
G117938 NA non-coding upstream 371732 26208356 ~ 26208871 (+)
G117933 NA non-coding upstream 375773 26204611 ~ 26204830 (+)
G117917 NA non-coding upstream 514764 26058254 ~ 26065839 (+)
G117847 pax7,LOC106964226,LOC102296763 non-coding upstream 663881 25916500 ~ 25916722 (+)
G118115 NA non-coding downstream 14085 26602656 ~ 26674451 (+)
G118135 NA non-coding downstream 73711 26662282 ~ 26664844 (+)
LOC120569009 NA non-coding downstream 155170 26743741 ~ 26763260 (+)
LOC120569008 NA non-coding downstream 192796 26781367 ~ 26784859 (+)
G118164 NA non-coding downstream 232672 26821243 ~ 26824078 (+)
wdr47a wdr47,LOC102290984 other upstream 83794 26421454 ~ 26496809 (+)
ccl20a.3 NA other upstream 162595 26416508 ~ 26418008 (+)
G118011 eif4e2 other upstream 178525 26395426 ~ 26402078 (+)
ece2a ece2,LOC103356888 other upstream 271056 26217998 ~ 26309547 (+)
LOC120568800 NA other upstream 363562 26214432 ~ 26217041 (+)
prkab2 prkab2,LOC101470867,LOC107384083,LOC102226598 other downstream 2211 26590782 ~ 26600072 (+)
G118149 NA other downstream 176921 26765492 ~ 26769911 (+)
LOC120567599 LOC101062208 other downstream 250607 26839178 ~ 26857394 (+)
LOC120568791 LOC103357601 other downstream 289984 26878555 ~ 26938882 (+)
G118234 sugp1 other downstream 294988 26883559 ~ 26886030 (+)

Expression


Co-expression Network