LOC120568700 (fam102b,LOC103357623)


Basic Information

Item Value
gene id LOC120568700
gene name fam102b,LOC103357623
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26572397 ~ 26581219 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816372.1
TACAGCAACAACCAGCAGCCAGCAACAGCTGAACAGTAGCGACAGACAGCACAGAGCAGGGAAAGTGTCTGTCTGCTACTTCTGTCAGGACTTGTTGCGCCACTGTCACTGACGTTTAAGAGATATCATGTCGTTCATTCTTATGAAGAAGAAGAGATTTAAATTTAAAGTAAACTTCAACTTGGACGAATTGTCATCGGTTCCCTTCGTAAACGGAGTTTTATTCTGTAAAGTTAGACTCCTTGATGGGGGCTTTGCCGAAGAGTCGTCTCGGGAGTCAGTCCAGGCCAACTGTGTACACTGGAGGAAGAAATTCTCTTTTGTGTGTAAGATGAGTGCCAATGCTGGGACAGGTGTACTAGACCCCTGTTTGTGCCGGGTGTCTGTGCGCAAGgAATTGAAGGGTGGAAAAACTTTTGCAAAGCTGGGCTTTGCTGACTTGAACCTGTCTGAGTTTGCTGGGTCTGGCAGCACCACGCGACGGTGTCTCCTAGAGGGATATGACACCAAGAACACCAGACAGGACAACTCAATTCTGAAGGTTGTCATCACAACACAACTCATGTCTGGAGACCCCTGTTTTAAAACTCCCCCATCTACAGCCATGACTCTGGGAATCCCACAGGCTGAAGCAGAGTGTCTCCTTGAGGACAGAAAGGGAGGGAACAAGCACATATCTCATTCACTCACTGTAAAGTCCGTATCAGTTCCAGATGAGCTTGTAGCATATGGTCACTCTAGAACACCCAGTCATGCGAGTCAGCATTCAAAAATCTCAGGTTACAGCTCCAATCACTCCAGTTTAACTGATCTTTGCCATCGGAGGAGTGTGTCTGCGGGTTCTGCCTCCATAGGCATCGGCAGCATCCCGGAACCTAGTGATCAGCAGGGGGAGAGCAGGACCACTCCCCCATTCTCAGCAACCTGTCAACACGCACCTGAACACTCCTCTACCCCTGCTAAAGTTCCAagTAGACATCCAGTAAAGCAGGACTCCATGGAGAATCAGCTGAAGAGAGTTGATGCCACCAGGGTGGATGCTGATGACATAATAGAGAAAATCCTGCAGAGCCAGGATTTCAGCCATGGCTTCTTGGACTCCAGTGCAGAGGAGGAGGGGCTCAGCTTGTTCGTTGGTCCTGGTGGGAGTACAGCCTTGGGAAGCCAGCATATGAGGGTCGCAGCTGGAGCCTTTGAGCAGGTGGTGATCAAGCGCTAGGCTTTGGGAAGCATCTGCCTGTCATGTCAAGGGTGCCGTATTACACTGATGCGGGGGACACAAGATTGAGTTGTAGAGGTGCTATCAGAAGTTGCTCCTCTCACTCCAGGAGATTTAATTTCTCTTAGGCAATCCCTCTGCATCTGACCTACAGTGTCTGTTGACCAGGAGAGCCCCCTAGTGTTCAAGAAGTGGAGGTGAAGGCCACAttattggaacattttggtgaCTGGGATAACTGTTGTACTGACAAAATCTATTGGTCTTCTTCTATGAAACCTGTAAGACTCAGGGTTAGTACTGTAATTCTACAAATATTGTTCACCCATCTTGAGCTGTTAAgggttttttctgctatttaaaaaagtatGCTTAAGTATCCAACCTGCTTTTGCTTTGGGATGGTTGATTTTGTTTCACCATTTTACTGTAGCGGGAGAGGGGACTGTGTCCGTTCCTTGAATTCCCATATATGTAAAGTAATAGAAAACTGACATTGTGAAATGTACATTGGTTACAGCACCACTTTGTGTCAGTAGCTCAAGCCCATTACAGATAACCACCTCTGTTCACCTGGTTGTGAGTGAGGATGCCTGCATTTAAAATACCATGAAGTTTTTATGTGTTGTTCCTTCGGTACgatgtctattttttttatgattattttttgggcttttccgcctttattcgataggacagctaggtgaaaaAGGGGGAgcacatgcaggaaatcatcacagttcagattcgaaccctggacctctgcgtcgaggcataaacctctcagtatatgtgcacctaCTCAGTAGATGTGCGCCtactctacccactgagccaacccggctaCATTATgtctattttgtgtgtgcatttgcgtttgtctgttgtctgtaaAGTCAAAAGTAATGAATATATTTTTACCACAGATTTTGCAAATGTGCCAAACTTAGTCAAATGTATATTTGCTGCCACTTAAGCAGTCTTATCTATAGTATGTAAACTATGTATGTATTCAAAGTCAGCTGTGTAAAGCTAATGACGTCTTAAgatatatttgttgtttttaagatGTTAGAATGTTGATGTTGTATTTAAGGTCaaataaaaagtacataaaAGCA
>XM_039816373.1
TATACAGCAACAACCAGCAGCCAGCAACAGCTGAACAGTAGCGACAGACAGCACAGAGCAGGGAAAGTGTCTGTCTGCTACTTCTGTCAGGACTTGTTGCGCCACTGTCACTGACGTTTAAGAGATATCATGTCGTTCATTCTTATGAAGAAGAAGAGATTTAAATTTAAAGTAAACTTCAACTTGGACGAATTGTCATCGGTTCCCTTCGTAAACGGAGTTTTATTCTGTAAAGTTAGACTCCTTGATGGGGGCTTTGCCGAAGAGTCGTCTCGGGAGTCAGTCCAGGCCAACTGTGTACACTGGAGGAAGAAATTCTCTTTTGTGTGTAAGATGAGTGCCAATGCTGGGACAGGTGTACTAGACCCCTGTTTGTGCCGGGTGTCTGTGCGCAAGgAATTGAAGGGTGGAAAAACTTTTGCAAAGCTGGGCTTTGCTGACTTGAACCTGTCTGAGTTTGCTGGGTCTGGCAGCACCACGCGACGGTGTCTCCTAGAGGGATATGACACCAAGAACACCAGACAGGACAACTCAATTCTGAAGGTTGTCATCACAACACAACTCATGTCTGGAGACCCCTGTTTTAAAACTCCCCCATCTACAGCCATGACTCTGGGAATCCCACAGGCTGAAGCAGAGTGTCTCCTTGAGGACAGAAAGGGAGGGAACAAGCACATATCTCATTCACTCACTGTAAAGTCCGTATCAGTTCCAGATGAGCTTGTAGCATATGGTCACTCTAGAACACCCAGTCATGCGAGTCAGCATTCAAAAATCTCAGGTTACAGCTCCAATCACTCCAGTTTAACTGATCTTTGCCATCGGAGGAGTGTGTCTGCGGGTTCTGCCTCCATAGGCATCGGCAGCATCCCGGAACCTAGTGATCAGCAGGGGGAGAGCAGGACCACTCCCCCATTCTCAGCAACCTGTCAACACGCACCTGAACACTCCTCTACCCCTGCTAAAGTTCCAagACATCCAGTAAAGCAGGACTCCATGGAGAATCAGCTGAAGAGAGTTGATGCCACCAGGGTGGATGCTGATGACATAATAGAGAAAATCCTGCAGAGCCAGGATTTCAGCCATGGCTTCTTGGACTCCAGTGCAGAGGAGGAGGGGCTCAGCTTGTTCGTTGGTCCTGGTGGGAGTACAGCCTTGGGAAGCCAGCATATGAGGGTCGCAGCTGGAGCCTTTGAGCAGGTGGTGATCAAGCGCTAGGCTTTGGGAAGCATCTGCCTGTCATGTCAAGGGTGCCGTATTACACTGATGCGGGGGACACAAGATTGAGTTGTAGAGGTGCTATCAGAAGTTGCTCCTCTCACTCCAGGAGATTTAATTTCTCTTAGGCAATCCCTCTGCATCTGACCTACAGTGTCTGTTGACCAGGAGAGCCCCCTAGTGTTCAAGAAGTGGAGGTGAAGGCCACAttattggaacattttggtgaCTGGGATAACTGTTGTACTGACAAAATCTATTGGTCTTCTTCTATGAAACCTGTAAGACTCAGGGTTAGTACTGTAATTCTACAAATATTGTTCACCCATCTTGAGCTGTTAAgggttttttctgctatttaaaaaagtatGCTTAAGTATCCAACCTGCTTTTGCTTTGGGATGGTTGATTTTGTTTCACCATTTTACTGTAGCGGGAGAGGGGACTGTGTCCGTTCCTTGAATTCCCATATATGTAAAGTAATAGAAAACTGACATTGTGAAATGTACATTGGTTACAGCACCACTTTGTGTCAGTAGCTCAAGCCCATTACAGATAACCACCTCTGTTCACCTGGTTGTGAGTGAGGATGCCTGCATTTAAAATACCATGAAGTTTTTATGTGTTGTTCCTTCGGTACgatgtctattttttttatgattattttttgggcttttccgcctttattcgataggacagctaggtgaaaaAGGGGGAgcacatgcaggaaatcatcacagttcagattcgaaccctggacctctgcgtcgaggcataaacctctcagtatatgtgcacctaCTCAGTAGATGTGCGCCtactctacccactgagccaacccggctaCATTATgtctattttgtgtgtgcatttgcgtttgtctgttgtctgtaaAGTCAAAAGTAATGAATATATTTTTACCACAGATTTTGCAAATGTGCCAAACTTAGTCAAATGTATATTTGCTGCCACTTAAGCAGTCTTATCTATAGTATGTAAACTATGTATGTATTCAAAGTCAGCTGTGTAAAGCTAATGACGTCTTAAgatatatttgttgtttttaagatGTTAGAATGTTGATGTTGTATTTAAGGTCaaataaaaagtacataaaAGCA

Function

symbol description
fam102b Orthologous to human FAM102B (family with sequence similarity 102 member B).

NR:

description
PREDICTED: protein FAM102B isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816372.1 True 2340 mRNA 0.45 11 26572397 26581217
XM_039816373.1 False 2339 mRNA 0.45 11 26572397 26581219

Neighbor

gene id symbol gene type direction distance location
prpf38b prpf38b coding downstream 593 26565990 ~ 26571804 (-)
gpsm2 gpsm2 coding downstream 63597 26496871 ~ 26508800 (-)
ccl20a.4 NA coding downstream 160294 26411167 ~ 26412103 (-)
capn10 capn10 coding downstream 161989 26400982 ~ 26410408 (-)
eif4e2 eif4e2,LOC102778094 coding downstream 171513 26392889 ~ 26400884 (-)
LOC120567967 LOC104952378,LOC100703940,LOC102297870,LOC103357619 coding upstream 23642 26604861 ~ 26652958 (-)
LOC120568933 LOC104965402,LOC103357616,LOC102791396 coding upstream 92814 26674033 ~ 26715435 (-)
LOC120569007 LOC103357614 coding upstream 184262 26765481 ~ 26772945 (-)
armc6 armc6,LOC102784696 coding upstream 195818 26777037 ~ 26781098 (-)
LOC120568902 NA coding upstream 244497 26825716 ~ 26833382 (-)
G118076 NA non-coding downstream 92719 26477463 ~ 26479678 (-)
G118075 NA non-coding downstream 97441 26473887 ~ 26474956 (-)
LOC120569074 NA non-coding downstream 145599 26421450 ~ 26426798 (-)
G118002 NA non-coding downstream 263071 26308787 ~ 26309326 (-)
G117995 NA non-coding downstream 360649 26211508 ~ 26211748 (-)
G118186 NA non-coding upstream 150658 26731877 ~ 26732084 (-)
G118308 LOC107384102,LOC105934594,LOC104929657,LOC103366675,LOC108239475,LOC103395958,LOC102222760 non-coding upstream 379181 26960400 ~ 26963752 (-)
G118321 NA non-coding upstream 498788 27080007 ~ 27142908 (-)
G118328 NA non-coding upstream 537813 27119032 ~ 27190233 (-)
G118337 NA non-coding upstream 593333 27174552 ~ 27197648 (-)
camk2n1a camk2n2 other downstream 252802 26315770 ~ 26319595 (-)
G117732 NA other downstream 1649079 24922203 ~ 24923318 (-)
G117560 NA other downstream 2035901 24499380 ~ 24536496 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 2715776 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 3080785 23468620 ~ 23491612 (-)
G118175 NA other upstream 80402 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 238619 26819838 ~ 26824570 (-)
LOC120568986 epha4,LOC100711706 other upstream 1062108 27643327 ~ 27675360 (-)
G118524 NA other upstream 1132248 27713467 ~ 27718759 (-)
metap1d metap1d,LOC102783095 other upstream 1565052 28146271 ~ 28152770 (-)

Expression


Co-expression Network