saga (LOC100700585,LOC102198835,LOC102289605,LOC101471160,LOC103367699,LOC102794384)


Basic Information

Item Value
gene id saga
gene name LOC100700585,LOC102198835,LOC102289605,LOC101471160,LOC103367699,LOC102794384
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4001441 ~ 4018262 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816388.1
CAAAGTTCACAGCCGGGTGACCTGATTGGCTGACAGAGGATGATGGGCTGTTTACATATAGAGCTCCTCTGACCGACGGCCGTCTCCCCCTCTCATCCAACAACACGTCTTCTTCCTCTGCTGCAACACAGGCGCTGCTCACTCGCTGCCCTCGAATCTGCACCAACATGACTCCAAAAAATGTTGTTTACAAGAAGATTTGCAAGGACAATTCGGTTGGCGTCTACATGGGGAGAAGAGATTTTGTCGACCGTGTTGACTCTGTGGATCCAGTGGATGGAGTCATCATCATTGATCCTGAGGCTCTGCAGCGGAGGAAagTGTTCGTCACCCTGTCCTGCACCTTCCGGTACGGCAGAGACGACATGGACGTGATGGGAATCGCCTTCCGCAGGGAGCTGTACCTGGCCACCCGCCAGGTGTACCCGCCTCTGCAGGACCTCGAGAAGGGAGTCCACACCAGGATGCAGGCCAAGCTGCTGCACAAGCTGGGCAACAACGCCTACCCATTCTTCTTTGAGTTTCCTGACAACCTGCCTTGCTCAGTGGCTCTCCAGCCAGGGCCCAATGATGTCGGCAAGCAATGTGCCGTGGAGTTTGAGATCAAAGCGTTCAGTGCTGAGAGCCAGGACGCTAAGGTACGCAAACGGAGCACAGTGAAGCTGTTGCTCAGGAAGGTCCAATACGCTCCAGACAGCGAGGGAGTGCAGCCCTCTGTTGATACCCCCAAGGACTTTGTCATGTCAGATAAACAGCTGCACCTCAAGGCCAGTCTGGACAAAGAGATTTACTACCACGGTGAGGTCATCAAAGTGAACGTCAGCGTCACAAACAACTCCAGCAAAAACATCAAGAACATCATTGTCTCTGTGGATCAGATCGCCAATGTGGTATTGTACTCCAACGACAGCTACGTCAAATCTGTGGCCATCGAGGAAACCGGGGATTCGGTGTCTCCCGGAGCGACTCTGCAGAAAGTCTACAAGCTGCTGCCTCTGCTGGCCAACAACACTGAGAGGAAGGGCATCGCTCTGGACGGCAAACTGAAGCATGAAGACACCAACCTGGCATCATCGAGCATtATCAAGGAAGGTGTTCTGAAGGAAGTTATGGGGATCATGGTTTCATACAGAGTCATGGTGAAGCTCATCGTCGGaggGATAATGGGATCAAGTGAGGTTGGCCTGGAAGTTCCCTTCAAACTGATGCATCCTAAACCTGATGCAGTGAAGGAGAAtgaggaggaggacgagcTTGAGTTCCAGGAGTTCAAACGCTCCTACCTGAAGGGGATGGTCGATGACGAGGACGAAGATGGAAACGTGTCGGGCGGTGACGACATGGAGCCCAAAGAGAAATAAAGGAGAAAGACGGAGAGTCGGCCAGAGTGACGACGGCTGTAAATAAGACCGCTGGAAGTTTAAGTCACCTCGAGTTTGTGCTAAAAGTAGCTTTAGACTTAATTAAAGGAACGTGCCTGCAAAAGTTTAGATGTTAGCAGACAGCTACTTATttccacatccagcagacacaaaacaacatgaTCATCCCATAGGAGTGGTGTCTAATATAagtataatattatattataaaatatataaatataaacacGCTGACTTAATGTGCAGACGTCATTGCCTGAATGTGTCTTGGATAATAATATTGAGGTTGGAAGCTAATTTAAAGCAGTTTAATACTGTAGCTAAATCTGATATGGTCCTTGAATAGATGAATCCTTGTAAAGTAATTTGTAAGAATAGGACTCTTAACTGCATTTTTAGATCCAAAGCATTTTGAGACAACATCACTAGTTATATGTTCGTTTTTTACAATCAGTGAACAATTGATAAATTGTGTCACCATTCAGACGCCGAGTTTCCATTTGGCTCGGCTCTGGAGGAAATGATCGGACTGTaaatctgctgctgctgagttTAGATTTACTTTAGCAACATGTACGTAAAAACATAATCTGTACTCAGCAGTTAAAGGAGATGAGATGCTCTGTGCAACGGTGCAGTTTGGAAATAAAAGCTGATTGATCCCTTCTCA
>XM_039816390.1
CAAAGTTCACAGCCGGGTGACCTGATTGGCTGACAGAGGATGATGGGCTGTTTACATATAGAGCTCCTCTGACCGACGGCCGTCTCCCCCTCTCATCCAACAACACGTCTTCTTCCTCTGCTGCAACACAGGCGCTGCTCACTCGCTGCCCTCGAATCTGCACCAACATGACTCCAAAAAATGTTGTTTACAAGAAGATTTGCAAGGACAATTCGGTTGGCGTCTACATGGGGAGAAGAGATTTTGTCGACCGTGTTGACTCTGTGGATCCAGTGGATGGAGTCATCATCATTGATCCTGAGGCTCTGCAGCGGAGGAAagTGTTCGTCACCCTGTCCTGCACCTTCCGGTACGGCAGAGACGACATGGACGTGATGGGAATCGCCTTCCGCAGGGAGCTGTACCTGGCCACCCGCCAGGTGTACCCGCCTCTGCAGGACCTCGAGAAGGGAGTCCACACCAGGATGCAGGCCAAGCTGCTGCACAAGCTGGGCAACAACGCCTACCCATTCTTCTTTGAGTTTCCTGACAACCTGCCTTGCTCAGTGGCTCTCCAGCCAGGGCCCAATGATGTCGGCAAGCAATGTGCCGTGGAGTTTGAGATCAAAGCGTTCAGTGCTGAGAGCCAGGACGCTAAGGTACGCAAACGGAGCACAGTGAAGCTGTTGCTCAGGAAGGTCCAATACGCTCCAGACAGCGAGGGAGTGCAGCCCTCTGTTGATACCCCCAAGGACTTTGTCATGTCAGATAAACAGCTGCACCTCAAGGCCAGTCTGGACAAAGAGATTTACTACCACGGTGAGGTCATCAAAGTGAACGTCAGCGTCACAAACAACTCCAGCAAAAACATCAAGAACATCATTGTCTCTGTGGATCAGATCGCCAATGTGGTATTGTACTCCAACGACAGCTACGTCAAATCTGTGGCCATCGAGGAAACCGGGGATTCGGTGTCTCCCGGAGCGACTCTGCAGAAAGTCTACAAGCTGCTGCCTCTGCTGGCCAACAACACTGAGAGGAAGGGCATCGCTCTGGACGGCAAACTGAAGCATGAAGACACCAACCTGGCATCATCGAGCATtATCAAGGAAGGTGTTCTGAAGGAAGTTATGGGGATCATGGTTTCATACAGAGTCATGGTGAAGCTCATCGTCGGaggGATAATGGGATCAAGTGAGGTTGGCCTGGAAGTTCCCTTCAAACTGATGCATCCTAAACCTGATGCAGTGAAGGAGAACAGGGTGTGCACCaaggacgagagagagagagtgcacaTTCGCCGAAATGACGGCTTTTCGACGATACTAAAGGACAGCATCTCTTTAGCAATGAAGCGAGCTACACTGTCTtgaggaggaggacgagcTTGAGTTCCAGGAGTTCAAACGCTCCTACCTGAAGGGGATGGTCGATGACGAGGACGAAGATGGAAACGTGTCGGGCGGTGACGACATGGAGCCCAAA

Function

NR:

description
S-arrestin-like

GO:

id name namespace
GO:0007165 signal transduction biological_process

KEGG:

id description
K19627 SAG; S-arrestin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816388.1 True 2052 mRNA 0.48 16 4001441 4018262
XM_039816390.1 False 1464 mRNA 0.53 17 4002141 4018262

Neighbor

gene id symbol gene type direction distance location
proca NA coding downstream 17446 3972332 ~ 3983995 (-)
LOC120568530 NA coding downstream 111525 3883756 ~ 3889916 (-)
LOC120568324 NA coding downstream 129626 3861329 ~ 3871815 (-)
LOC120568321 NA coding downstream 240774 3749457 ~ 3760667 (-)
LOC120568526 NA coding downstream 250301 3747297 ~ 3751140 (-)
cldn15la LOC104937175,LOC107383743,LOC108229378 coding upstream 2905 4021167 ~ 4027586 (-)
si:ch73-170d6.2 NA coding upstream 92484 4110746 ~ 4121351 (-)
slc39a6 slc39a6 coding upstream 127601 4145863 ~ 4168656 (-)
LOC120567835 LOC106949703,LOC103156008,LOC107087008 coding upstream 469066 4487328 ~ 4499789 (-)
LOC120567837 NA coding upstream 487460 4505722 ~ 4510614 (-)
G111997 NA non-coding downstream 32223 3967994 ~ 3969218 (-)
LOC120568335 NA non-coding downstream 180251 3800195 ~ 3821190 (-)
LOC120568342 NA non-coding downstream 280319 3718266 ~ 3721122 (-)
LOC120568339 NA non-coding downstream 308978 3691144 ~ 3692463 (-)
G111961 LOC102295145 non-coding downstream 317829 3683304 ~ 3683612 (-)
G112007 NA non-coding upstream 21622 4039884 ~ 4040197 (-)
LOC120567799 NA non-coding upstream 56467 4074729 ~ 4082082 (-)
G112018 LOC102799398 non-coding upstream 72246 4090508 ~ 4138931 (-)
G112019 NA non-coding upstream 74303 4092565 ~ 4140920 (-)
G112009 NA non-coding upstream 81912 4100174 ~ 4100868 (-)
LOC120568325 NA other downstream 368042 3629565 ~ 3633399 (-)
LOC120568522 NA other downstream 415915 3564546 ~ 3585526 (-)
LOC120569104 NA other downstream 544907 3445400 ~ 3456534 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other downstream 629666 3314646 ~ 3371775 (-)
LOC120568005 NA other downstream 772294 3204287 ~ 3229147 (-)
G112043 NA other upstream 219840 4238102 ~ 4238670 (-)
G112046 NA other upstream 249276 4267538 ~ 4284083 (-)
G112233 NA other upstream 1645742 5664004 ~ 5668687 (-)
LOC120568546 NA other upstream 1705471 5723733 ~ 5746081 (-)
G112328 NA other upstream 1774901 5793163 ~ 5852447 (-)

Expression


Co-expression Network