LOC120568729 (LOC104956573,LOC103360293)


Basic Information

Item Value
gene id LOC120568729
gene name LOC104956573,LOC103360293
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 12801906 ~ 12803940 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816412.1
ATTAAACTCAACCAGAACCTGTCTATGACCTATGacagacagcttttgttttcgATTTCGTGACCAAACTGCAGGTGTGTCCGAGTTTTACCTGCTAGTTTAGCAGATATGGGTGATTTCCCTGTAAACCCGCTGGTTTTGGTTGGTGTCGGGTCCAGCTTTGCCTTCTCTGGCCTTTTCTATCATCTAtaccaagaaaagaaaaaagagttgGAAAAGCTGAAGGAAATACCCCTTTTCAAGCCAGATCAACATTTGGTCCAAGTACTAAGAGTATCTCCCCACAAGCGACTTCAGTATGTTGCTGTAGAAGGTCTGGTCCAGGCGGATGGGGAGCCTCTGGCCAGCCAGTTTGTCCCACGATGCTTCGGTGTGATTCAGAAGATAGCAGTTGAGGAGCACTGGAAATACTGGAACTCCATCACCAAGACATGGAATTCTCGGACAATGAACAGAAAAGAAACCAACAACTCTGTGCCCTTCAGTCTGGTCAGCCCTGGAGCCTACATCACTGATTTGTATGTGAAGATTCAAAACCCTCTGGAGGCCTCGGGGTGCTACCTGGATAGGGTTTATTTCAAAGTAAGACGTGCTGAGGAGGGCTTGGGGAACTTGGTGATGCAGGGCCTCAGCGGGGAGAAACCAGTGGCGATGGAGGAGAGCGAGGAGCTGCTGCGTGTGGGGAGCACCCTGACTGGTTTCGGTGAGGTGGTGCTGGAGGGGGGCCAGGTGATGAGGCTGCAGGCCCCGCAGGACGGCCGCAAGTTCATCCTGGTGCCCACTGACTACAGGAGCTTCATGGACAGGCACGAGAGATCAGCCAGCATGTGGAAGACGCTGACTGCTGTTACTGGTATCACAGGGGCTTCGCTTCTAGCCAAGGCCATTTACTGCTTGGTGGGAAAACAGGATGACAGGTCAAAGTAGGCTTGGAGACGTGGATACTGCAGGGTTAACGGCCTTAAAAAGCTGTGTCACCGCTTTTTGGGCGCCCCATTACTGCCGCCGGTGTTTTATATTAGATTCCACGGCACTGCCCTGATGCTAACATAATTTGTCACTTGCCATATTGCAAGGTTATAAAGCTGTGAGGGGCAAAACACAACACTATTGGATgagacattacacacacagaaagcacATTTTAGAAAGACAATAACAAAttagaaaatacaaaaacaaacttactttacaaaaaagaaaaggtagCAACAACAATTTTAGTGTGCAATTAGACAAAACCCAAGTTAATTATGTATTTTCTAAACTGTTGTGTTCTGTTATTGTGttaaatatttagttgaatTGTTTTACTGAATGGACcactcaaacaaagatgtttaATCACttgtcgagagagaga

Function

NR:

description
PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816412.1 True 1363 mRNA 0.47 5 12801906 12803940

Neighbor

gene id symbol gene type direction distance location
casq1a LOC104956576 coding downstream 15228 12778340 ~ 12786678 (-)
si:rp71-1g18.1 NA coding downstream 27143 12769369 ~ 12774763 (-)
sall2 LOC104956582,LOC103360303 coding downstream 86160 12706174 ~ 12715746 (-)
mmp14b LOC103360306,LOC103396588 coding downstream 97143 12691995 ~ 12704763 (-)
c11h14orf119 LOC104956585 coding downstream 137205 12663195 ~ 12664701 (-)
LOC120567650 LOC100690777,LOC102314387,LOC101469034,LOC102212652 coding upstream 35643 12839583 ~ 12844436 (-)
hhatla hhatl,LOC108238572,LOC103360290,LOC106926958 coding upstream 42188 12846128 ~ 12854319 (-)
LOC120568154 NA coding upstream 68918 12872858 ~ 12885447 (-)
xirp1 LOC104959684 coding upstream 127458 12931398 ~ 12944718 (-)
cfap410 cunh21orf2,LOC102788189 coding upstream 308423 13112363 ~ 13115289 (-)
G113945 NA non-coding downstream 8879 12789839 ~ 12793027 (-)
G113933 NA non-coding downstream 42633 12757651 ~ 12759273 (-)
LOC120568043 NA non-coding downstream 201314 12585529 ~ 12600592 (-)
G113828 NA non-coding downstream 445015 12356334 ~ 12356891 (-)
G113810 NA non-coding downstream 445825 12353843 ~ 12356081 (-)
G114129 col6a1,col6a2 non-coding upstream 149440 12953380 ~ 13167706 (-)
LOC120567923 NA non-coding upstream 219330 13023270 ~ 13039958 (-)
G114131 NA non-coding upstream 277674 13081614 ~ 13084384 (-)
G114153 LOC105007837 non-coding upstream 284746 13088686 ~ 13091316 (-)
G114130 col6a2,LOC105007837 non-coding upstream 287707 13091647 ~ 13094829 (-)
LOC120568934 LOC104956577 other downstream 33281 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 193337 12601180 ~ 12608569 (-)
G113805 NA other downstream 583639 12218062 ~ 12218267 (-)
LOC120567758 NA other downstream 1912954 10887007 ~ 10888952 (-)
brinp2 brinp2,LOC103369811 other downstream 2534828 10040686 ~ 10267078 (-)
LOC120568578 wdr48 other upstream 162526 12966466 ~ 12975328 (-)
G114152 NA other upstream 280621 13084561 ~ 13088563 (-)
dis3l2 dis3l2 other upstream 665591 13469531 ~ 13482225 (-)
tfr1a NA other upstream 1145931 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1809673 14613613 ~ 14618224 (-)

Expression


Co-expression Network