LOC120568730 (LOC101472437,LOC102310659,LOC102778004,LOC103360659,LOC106534850)


Basic Information

Item Value
gene id LOC120568730
gene name LOC101472437,LOC102310659,LOC102778004,LOC103360659,LOC106534850
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 30101634 ~ 30218722 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039816413.1
TCAGCAGAGGCAGAGCAGAGTGAGTGCTGAAACGTTACTGACCGGAGGTGCTCTCCTCTGAACGTCGGTCTCATTTTCACGATGAGTTTTAATGTCAGCACACAGGGCGAACAGCTTTGGGGAAGACAGTGCCAGTCATGCGCTGGCACCATTTTTTGAACCCCCAAACACCGCATTTTAGGGGCGACCACGGACAAATCCCATTTACAGGCATCACCTCGCCAGGCGATGGAGGTCCTCCGTTAAGGGCTTGGTGGGGGAACCAAACTCTGTCGGAATTTCGCCAAAATTACGACGGGAATTAAGTACAGCTCCCTGTCTCCCGGCAACGGGAGAGACCACCTGCCGGTCGTGATGTCTCGTGCGAAGGAGCGGCTGAAAGGCGGGAATGAGACCAAGGACAGCGTCACTCTGCTGCCGTGCTTTTACTTTGTAGAGCTCCCTATCCTGGCCTCCTCTGTTGTCAGCCTTTATTTCCTGGAGCTAACGGATATTTTCCAGCCAGTGCATTCTGGGTACAGTTGTAATGACCGCAGTCTGTCTCTGCCCTACATCCTGCCCAGACAGGAAGTCTGCCCACTGCCTCTGCTCTTCAGCTTGGCCTTCGCCGCTCCCACTGCCACGaTTCTTATAGGAGAAGCCATTCTGTACTGCTATCTCTCCAGGAGGTCATCAGCCACGCAGACTGAGGCCAACATCAACGCTGCAGGCTGTAATTTCAACTCCTACATCCGCAGGGCCGTCCGCTTCATAGGTGTGCATAtctttggcctgtgtgtgacaGCACTGATAACTGATATTCTCCAACTGTCCACTGGTCAACACACACCCTACTGGTTGGATGTGTGTAAACCCAACTTGACCCACATTAACATGTCCACTTGCGATGAAGCTTTTATTCTGGAGGACATCTGCTCTGGACAAGACACTGGGCTCATCAATGCTGGGAGGAAGTCGTTTCCCTCCCAGCATGCAACTCTGGCTGCCTTTGCTGCTGTCTACATCTCAATGTACTTCAACACGGTGCTGACAGACTCTGCCAAGCTGCTGAAGCCTCTCCTGGTGTTCTCCTTCGTCATGCTGGCCATCCTGGCCGGGCTGACCCGGATCATCCAGTTCAGAAACCATCCTGTCGATGTCTACTGTGGATGGTTACTGGGAGCTGCCATTGCCTTTTATCTGgGTGTGTATGCAGTGGGGAACTTCCAGCCCAGTGAGGATCGGTCCAGAATTCGAGCACCCACCCCCACCCTGAGAgagccccccctctcctccttacCCAatgtcagccaatcagcaatTAGCAACAGCCACCAAGGTCACCACACTCTGGCTCCCAGCCAACCAGAGCCCATCATCACCAGGACCTCTTCCCACACTTTGTCCCCCAACCGACCACAGCCCATGCTGACGCGAAGTGCCTCCTACCGAGAGCCGTCTATGTCCAATTTGAAAAGAGCCAGTGCTGAGGTGGAGGTGATAACCCCATCCAGTCCCCTGGGCAACCATGACAACATGATGACCTtcagcagcagcacactgcCAAGGTCCCACGGAGGCTCCTCATTGGAGGAGGGTCGCATTCCACGCCGTCACGCCTCCATCCATGCATCAATGGACTCAACCCGATCCAAACAGCTGCTCAGCCAGTGGAAGAATAAAAACGACAATAGGAAACTGTCCCTGCAGGTGATGGATGGAATAAGACcagcctcctcctcatctcctcaGAGGAACATGGAGCTGCGCTGCTCCTCTGAACCTTCTGCCATGGGCCTGGAGGCAGAGCTCCGAGGTGGAATACACCTGCCTTCACTTATCGCTTGTCAGGAAACAGAGCTGCGTGCTGGGGCTCACATTCCCGTTCAATACATGAAACTAGCAGCAAGCTCTGTTCCTATGGCCAATCATAATCACCAGACCCATAATGGCAGCAGCGGAATGGCTGGTGGGGCCAGAGTGTCTATCCAATCCCGGCCTGGATCCTCCCAGCTGGTTCACATTCCTGAGGAGGAAAACCTTACCAGCAGGGATCAGGAGAGTGAATCAGAGGACAGCATTATGGATGGAGGTGGGTCAGTGAGGGAAAAGTGGCTGAGAGTGACTGAGAAGACCACCATCCCCTGCAGGCCGCTCAGTGCTGGAGGACAGCCTCGTCTTATGCAGGTGATAGCCTTATCCAAACAGCAGGGTCTGCTACACTCTCCTCGGTCGGAGGATGGTGGATCCATTCGGTACCGAGCCTTGACAGACCAGGACCCATCACCACCAGCCTCTACCACAGGAGCAGTGGGAGGAGGAGGAGGTTTGGAAAGAAGTGGCAGCATAGTCCGTGTTGAAGCCCACCCAGAGTCCAGATCAAACAAACCTGTGGTGAAACCTCCAAGCACCGACGGAAGTGGCTCCTGGCGATGGAAACCACCAGAACAACGAGCCTCGCTCCGGCAGTCAGCTTTCACCCTCAACGATCTGAACAGACACACTGACAGCTGTGATTCACTGAGGGATGGAGGGTCAGTGGATGGGCGGAGGAGCGTGGCAGGAACTGAAAGTGAGAGTGAAGcgggaggagatggaggaggagacggagggggaggaggagacggAGGGGGCGTGGGAGGAGGGGTATACACAAACCATCCACATGTTGTACACCCTTTACATCCTTTACATCCCAATAACCCCAACAACTTCCAGCACCCCAATTTTAACCCCAACAATCCCAACTATAATAACATTCACTTTAACTTCAACCCCAACTCTGCCAATTTCAACCCCAACTCTGCCAACTTTAACCCCAACTCTACCAACTTCAACCCCAACTCTGCCAACTTCAACCCCAACTCTGCCAACTTCAACCCCAACTCTGCAAACTTCAACCCCAACTCTACCAACCCACACATGCCATTCACCCCCACTGTCACCTTTGCTCCTCCCTTCCACCCCCACCCGCAGGCCATCACCACCATCAGGGTCACCCCGGTGGAGGGGACGGCTGCcagcagcgacggtggctcagACTGCCAGTCGGTTACCTCGTCCAGCCGTGAGTCCACCCTGAGGAGGAAGAGTGGCTCCCACATCGGCCATGTCCCAGATCGAGGGCCCACCCCAGATCTCCACAACAACCACCGCCTCTGTGATGACAGTAACCGCCTCGACAACGAAAGCAGCAACCGTTTCCACGAAAACCTTCGAAGTTTTCAAGAAAACCCCATCCACCTTAACCATCCAAGCAGGCAGATGCAGGGGATGTTTGTTCGTCCTAGCCCAACGCCTCCCCCTACCTTACCCCGCCCCATCCTGACTCACACTCCGCCTCCTACTCTGGGGTTGGCCTATAAAGAATGACATGCTCAGTGTAAAATAATCCATCTATACCTGTGATTAAATGTCCTACTTGACCAGGACAAAATGTCAATGGAGATGCTGCATGGGCCATTCCGAACTTCAGTTCGGACCAAATATTAAAGGAAATTTGGTTAAATCTGTCCACAAAAAAGTGCTAGTCCCATCCACAACCTTTTACCTGTCCAATTAGGGCACAATATATAGCCAATTAtgtccccctcccctcctccccccaacAACCCAGCTGGTTTAGTATCcaactaaataaatgttatgTCTTACTAGGAGACATACTGtaagctttttttaaaacaattagCAAGAGGTTCACAATCCTTTTTCGGTCAAAAGCTATAGAGAGTATTAACACAATTAGCCATGCCTACAAGCTCCAACTGGCCAATAAGAAATTACTATAGTGAGGGCCCACGTTTAGAGTAGTGAGTTTGATTCAACATTTttccttgtgttttttctgGATACACAGTTTTTCGTAAATGTAATGCTTGAGTGAATTTGCTTCATAGGCACAAGGATAATGAGCTTAATAAACTGCTGACCATTTGACTCACTCAGAAGGAGCGACTCCATCCTCCTTGCTTTGTCCCATACCTCCCTGCCAGCAAGGCTGGATTCAGCCTAATGACTCTGCCCCCCTATCCTCTGACTGCTAGATCAGCTGTCCATGGGATAACAATCTTTCCACAacatgtatacatacagtatattgtcagCTCTAATGCTTCTGTCAAACACAGGTaacaatatcaatatatatataacttaacTATGTAACCACATGCCATTAGATGGACGTTTGCATTCAAAGTCCATAACTGTGCTGTGTTTGTATATAGGAATGTGAGTGGCCACAGTGGAAATTAAACCCACAGTCTTTATTGCGTCTGGGCTACACACTGGGCAATAACAGTATCTCTTAGGTCATGGTggtattgtgtttgtgttggataAGAACAATATCATGGGACTTTGTGTTTAAATATAGTGCTCTATTTTTTACCTGTTGTGTTTTAATTATGTGCAGTATATGAATATGATTCTGACTGTGTAGTTGCTGTACTGTACACTGGCACATACAGCATTTGAGCCATCTGAACAAACTTAGACCATACACAAGTCCAAAGACTGAAGGAAGtcaagttttttcttttctttgtttggtttattttatCAGCTTATCATGTCTCCcagtattaaagtgatggtttggagtaattcaccctagggtc

Function

NR:

description
phospholipid phosphatase-related protein type 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039816413.1 True 4601 mRNA 0.51 11 30101634 30218722

Neighbor

gene id symbol gene type direction distance location
LOC120569133 NA coding upstream 44525 30055815 ~ 30057109 (+)
LOC120569089 NA coding upstream 55444 30044894 ~ 30046190 (+)
LOC120568908 NA coding upstream 68100 30031910 ~ 30033534 (+)
LOC120567688 NA coding upstream 358042 29735520 ~ 29743592 (+)
LOC120567686 NA coding upstream 409281 29690957 ~ 29692353 (+)
LOC120567691 LOC107740693 coding downstream 789000 31007722 ~ 31011324 (+)
LOC120568980 NA coding downstream 1213084 31431806 ~ 31453460 (+)
eif3f eif3f coding downstream 1642008 31860730 ~ 31865235 (+)
LOC120568893 LOC100705068 coding downstream 1710423 31929145 ~ 31939478 (+)
lig1 lig1,LOC102777267 coding downstream 1723481 31942203 ~ 32016352 (+)
G118965 NA non-coding upstream 23424 30077818 ~ 30078210 (+)
G118964 NA non-coding upstream 23922 30077399 ~ 30077712 (+)
G118951 NA non-coding upstream 134017 29967378 ~ 29967617 (+)
G118944 NA non-coding upstream 187976 29913450 ~ 29913658 (+)
G118943 NA non-coding upstream 193155 29907833 ~ 29908479 (+)
G118994 NA non-coding downstream 44537 30263259 ~ 30263559 (+)
G119030 NA non-coding downstream 233405 30452127 ~ 30462896 (+)
G119064 NA non-coding downstream 463359 30682081 ~ 30682321 (+)
G119066 NA non-coding downstream 474266 30692988 ~ 30693284 (+)
G119071 NA non-coding downstream 576520 30795242 ~ 30795503 (+)
LOC120567689 NA other upstream 131721 29963415 ~ 29969913 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other upstream 1931664 28156801 ~ 28169970 (+)
LOC120568664 NA other upstream 2396423 27704001 ~ 27705211 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 2491916 27602000 ~ 27609718 (+)
gpr35b NA other upstream 2702238 27394523 ~ 27399396 (+)
LOC120568595 sdr16c5 other downstream 350373 30569095 ~ 30677352 (+)
G119114 NA other downstream 946504 31165226 ~ 31203586 (+)
G119123 NA other downstream 980238 31198960 ~ 31235565 (+)
G119257 NA other downstream 1241142 31459864 ~ 31460908 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other downstream 1647033 31865755 ~ 31869495 (+)

Expression


Co-expression Network